BLASTX nr result

ID: Coptis24_contig00013142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013142
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE80125.2| IMP dehydrogenase/GMP reductase, putative [Medica...    74   9e-12
ref|XP_002320510.1| predicted protein [Populus trichocarpa] gi|2...    73   3e-11
ref|XP_002302840.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
ref|XP_002462910.1| hypothetical protein SORBIDRAFT_02g034270 [S...    72   6e-11
ref|XP_002520402.1| conserved hypothetical protein [Ricinus comm...    71   8e-11

>gb|ABE80125.2| IMP dehydrogenase/GMP reductase, putative [Medicago truncatula]
          Length = 584

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 44/145 (30%), Positives = 75/145 (51%), Gaps = 2/145 (1%)
 Frame = +1

Query: 7   YAWGAAILAFLYRGLGAATCAKVKGVTGYMTLLQAWIYEYFPVFMTVP-NFNYISSQPRA 183
           Y+WGA  LA+LY  L        + + G +TLL AW   +F  F ++  N +Y+ + P A
Sbjct: 326 YSWGAMTLAYLYGELADTCRPGHRALGGSVTLLTAWFLAHFSGFFSIDLNTDYLENYPVA 385

Query: 184 HRHIPVAPHYYDTTYALQFYRAIIDDLNEFNVVWHPYKNIRDTNPIDDIAFFEG-LLCFF 360
            R      H    T     YR+++D +   +V W PY+  R+ +  +++ ++ G ++C  
Sbjct: 386 ARWKLQKGHGEGIT-----YRSLLDRIQLDDVCWRPYEEHREIHDFEEVFWYSGWIMCGV 440

Query: 361 NIVELYAVARVVRQLGHVQLVPKDP 435
             V  +   RV+RQ G+VQ +P+ P
Sbjct: 441 RRVYRHLPERVLRQYGYVQTIPRHP 465


>ref|XP_002320510.1| predicted protein [Populus trichocarpa] gi|222861283|gb|EEE98825.1|
           predicted protein [Populus trichocarpa]
          Length = 436

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 53/156 (33%), Positives = 72/156 (46%), Gaps = 12/156 (7%)
 Frame = +1

Query: 1   EEYAWGAAILAFLYRGLGAATCAKVKGVTGYMTLLQAWIYEYFPVFMTVPNFNYISSQPR 180
           EE+AWGAA LAFLYR LG A       + G +TLLQ W   YF + +  P  N    +  
Sbjct: 208 EEFAWGAAALAFLYRALGNACVKSQSTICGCLTLLQCW--SYFHLNVGRPKLN----RDP 261

Query: 181 AHRHIPVAPHYY------DTTYALQFYRAIIDDLNEFNVVWHPYKNIRDTNPIDDI---- 330
            H H P    +        T   + FYR  +D L   +V W PYK +  T    DI    
Sbjct: 262 IHDHFPFVLRWKGKQSGPTTNRDVVFYRKALDSLKPTDVEWLPYKIMDSTVIPKDIKNTL 321

Query: 331 --AFFEGLLCFFNIVELYAVARVVRQLGHVQLVPKD 432
                + +L  F+  E +   R +RQ G +Q +P+D
Sbjct: 322 ILGRSKTMLICFDKAERHLPDRCLRQYGMLQPIPED 357


>ref|XP_002302840.1| predicted protein [Populus trichocarpa] gi|222844566|gb|EEE82113.1|
           predicted protein [Populus trichocarpa]
          Length = 416

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 53/155 (34%), Positives = 71/155 (45%), Gaps = 12/155 (7%)
 Frame = +1

Query: 4   EYAWGAAILAFLYRGLGAATCAKVKGVTGYMTLLQAWIYEYFPVFMTVPNFNYISSQPRA 183
           EYAWGAA LAFLYR LG A       + G +TLLQ W   YF + +  P  N    +   
Sbjct: 198 EYAWGAAALAFLYRALGNACVKSQSTICGCLTLLQCW--SYFHLNVGRPKLN----RDPI 251

Query: 184 HRHIPVAPHYY------DTTYALQFYRAIIDDLNEFNVVWHPYKNIRDTNPIDDI----- 330
           H H P    +        T   + FYR  +D L   +V W PYK +  T    DI     
Sbjct: 252 HDHFPFVLRWKGKQSGPTTNRDVVFYRKALDSLKTTDVEWLPYKIMDSTVIPKDIKNTLI 311

Query: 331 -AFFEGLLCFFNIVELYAVARVVRQLGHVQLVPKD 432
               + +L  F+  E +   R +RQ G +Q +P+D
Sbjct: 312 LGRSKTMLICFDKAERHLPDRCLRQYGMLQPIPED 346


>ref|XP_002462910.1| hypothetical protein SORBIDRAFT_02g034270 [Sorghum bicolor]
           gi|241926287|gb|EER99431.1| hypothetical protein
           SORBIDRAFT_02g034270 [Sorghum bicolor]
          Length = 619

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 59/153 (38%), Positives = 70/153 (45%), Gaps = 15/153 (9%)
 Frame = +1

Query: 4   EYAWGAAILAFLYRGLG-AATCAKVKGVTGYMTLLQAWIYEYFPVFMTVP-NFNYISSQP 177
           EYAWGAA LA LYRGL  A T        G  TLL AWIYEY P+  T P   N  +  P
Sbjct: 211 EYAWGAAALAHLYRGLSVAVTPNATTQFLGSATLLMAWIYEYLPI--TQPQQKNQSTLLP 268

Query: 178 RAHRHIPVAPHYYDTTYA----LQFYRAIIDDLNEFNVVWHPYKNIRDTNP--------- 318
           RA R      ++   T      +  +R + + L    V W+PYK   D NP         
Sbjct: 269 RACRW-----NFGGATRGQRKKVMEWRKVFEQLQFSEVNWNPYK---DMNPAIVPEYCIA 320

Query: 319 IDDIAFFEGLLCFFNIVELYAVARVVRQLGHVQ 417
            D+I F    L  FNI E+Y   R  RQ G  Q
Sbjct: 321 ADNICFSRTWLISFNIKEVYVPDRFARQFGREQ 353


>ref|XP_002520402.1| conserved hypothetical protein [Ricinus communis]
           gi|223540449|gb|EEF42018.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 837

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 53/155 (34%), Positives = 73/155 (47%), Gaps = 13/155 (8%)
 Frame = +1

Query: 7   YAWGAAILAFLYRGLGAATCAKVKGVTGYMTLLQAWIYEYFPVFMTVPNFNYISSQPRAH 186
           YAWGAA LAFLYR LG AT      ++G +TLLQ W   YF + +  P F     Q    
Sbjct: 231 YAWGAAALAFLYRALGRATLKSQSTISGCLTLLQCW--SYFHLNIAQPKF----YQDPVR 284

Query: 187 RHIPVAPHYYDTTYA-------LQFYRAIIDDLNEFNVVWHPYKNIRDTNPIDDI----- 330
              P   H++    +       + FYR  +D LN  +V W PY NI  T   +++     
Sbjct: 285 DCFPFV-HWWKGKQSAATVKRDIVFYRKALDSLNPSDVEWLPYNNIDSTLIPENVRSSLI 343

Query: 331 -AFFEGLLCFFNIVELYAVARVVRQLGHVQLVPKD 432
               + +L  F+  E +   R +RQ G  Q +PKD
Sbjct: 344 LGRSKTMLICFDKAERHLPDRCLRQHGMHQGIPKD 378


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