BLASTX nr result

ID: Coptis24_contig00013038 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013038
         (1416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269181.2| PREDICTED: uncharacterized protein LOC100263...   669   0.0  
emb|CBI29197.3| unnamed protein product [Vitis vinifera]              667   0.0  
ref|XP_002519934.1| reticulon3-A3, putative [Ricinus communis] g...   665   0.0  
ref|XP_002328759.1| predicted protein [Populus trichocarpa] gi|2...   659   0.0  
ref|XP_003547737.1| PREDICTED: uncharacterized protein LOC100780...   657   0.0  

>ref|XP_002269181.2| PREDICTED: uncharacterized protein LOC100263017 [Vitis vinifera]
          Length = 631

 Score =  669 bits (1726), Expect = 0.0
 Identities = 328/435 (75%), Positives = 364/435 (83%), Gaps = 3/435 (0%)
 Frame = -2

Query: 1298 FCDMAKYRPLFLTVYAAVLVGIVFSSFYVFSAIYGAKPIYTXXXXXXXXXXXXXXXPTHN 1119
            F D A  +PLFLT+YA V+VGIVFSSFYVFSAIY A    +                  N
Sbjct: 6    FHDAANSKPLFLTIYATVIVGIVFSSFYVFSAIYSAD---SSTWFSSSSSSISDVDQGPN 62

Query: 1118 SSRPTVLGGTSDP---SSKTRESGIRPIWDIPPIGTKMPPVEAFRLTKALVKERVKHNII 948
             S+ T  G    P   S K++    RPIW+ PP G K P ++AF+LTK LV++RVK N+I
Sbjct: 63   VSQRTDWGAVPAPPPKSPKSQNMWTRPIWEAPPRGEKRPSLKAFQLTKTLVEQRVKDNVI 122

Query: 947  IVTFGNYAFMDFILNWVKHLTDLNVSNILVGAMDTKLLEALYWKGVPVFDMGSHMSTTDA 768
            IVTFGNYAFMDFIL WVKHLTDL +SN+LVGAMDTKLLEALYW+GVPVFDMGSHMST D 
Sbjct: 123  IVTFGNYAFMDFILTWVKHLTDLGISNLLVGAMDTKLLEALYWRGVPVFDMGSHMSTIDV 182

Query: 767  GWGSPTFHKMGREKVILIDAMLPFGYELLMCDTDMVWLKNPLPYLACFPAADVLTSTDQV 588
            GWG+PTFHKMGREKVILIDA+LPFGYELLMCDTDMVWLKNPLPYLA FP ADVLTS+DQV
Sbjct: 183  GWGTPTFHKMGREKVILIDALLPFGYELLMCDTDMVWLKNPLPYLARFPGADVLTSSDQV 242

Query: 587  VPTVVDDRLEIWHQVTGAYNIGIFHWRPTDSAKKLAKEWKEMLLADDKIWDQNGFNEIVH 408
            VPTVVDDRL+IW QV  AYNIGIFHWRPTDSAKKLA+EWKEMLLADDKIWDQNGFN++V 
Sbjct: 243  VPTVVDDRLDIWQQVGAAYNIGIFHWRPTDSAKKLAREWKEMLLADDKIWDQNGFNDLVR 302

Query: 407  KQLGPSVDSESGLVYAFDGTLKLGLLPASIFCSGHTFFVQVMYQQLQLEPYAVHTTFQYA 228
            +QLGPSVD +SGL YA+DG LKLGLLPASIFCSGHT+FVQ MYQQL+LEPYAVHTTFQYA
Sbjct: 303  RQLGPSVDEDSGLAYAYDGNLKLGLLPASIFCSGHTYFVQSMYQQLRLEPYAVHTTFQYA 362

Query: 227  GTEGKRHRLREGMVFFDEPEYYNSPGGFLSFKPSIPKSLLLDGEHNVKSHFTLINYQLKQ 48
            GT+GKRHRLRE  VF+D PEYY+SPGGFL+FKPSIPKSLLLDGEHN++SHF LINYQ+KQ
Sbjct: 363  GTDGKRHRLREAKVFYDPPEYYDSPGGFLTFKPSIPKSLLLDGEHNLESHFALINYQMKQ 422

Query: 47   IRTALAIASLLNRIL 3
            IRTALAIASLL R L
Sbjct: 423  IRTALAIASLLKRTL 437


>emb|CBI29197.3| unnamed protein product [Vitis vinifera]
          Length = 642

 Score =  667 bits (1720), Expect = 0.0
 Identities = 328/443 (74%), Positives = 364/443 (82%), Gaps = 11/443 (2%)
 Frame = -2

Query: 1298 FCDMAKYRPLFLTVYAAVLVGIVFSSFYVFSAIYGAKP--------IYTXXXXXXXXXXX 1143
            F D A  +PLFLT+YA V+VGIVFSSFYVFSAIY A          +             
Sbjct: 6    FHDAANSKPLFLTIYATVIVGIVFSSFYVFSAIYSADSSTWKVSFALLNVSFLTGIVQSV 65

Query: 1142 XXXXPTHNSSRPTVLGGTSDP---SSKTRESGIRPIWDIPPIGTKMPPVEAFRLTKALVK 972
                   N S+ T  G    P   S K++    RPIW+ PP G K P ++AF+LTK LV+
Sbjct: 66   TDVDQGPNVSQRTDWGAVPAPPPKSPKSQNMWTRPIWEAPPRGEKRPSLKAFQLTKTLVE 125

Query: 971  ERVKHNIIIVTFGNYAFMDFILNWVKHLTDLNVSNILVGAMDTKLLEALYWKGVPVFDMG 792
            +RVK N+IIVTFGNYAFMDFIL WVKHLTDL +SN+LVGAMDTKLLEALYW+GVPVFDMG
Sbjct: 126  QRVKDNVIIVTFGNYAFMDFILTWVKHLTDLGISNLLVGAMDTKLLEALYWRGVPVFDMG 185

Query: 791  SHMSTTDAGWGSPTFHKMGREKVILIDAMLPFGYELLMCDTDMVWLKNPLPYLACFPAAD 612
            SHMST D GWG+PTFHKMGREKVILIDA+LPFGYELLMCDTDMVWLKNPLPYLA FP AD
Sbjct: 186  SHMSTIDVGWGTPTFHKMGREKVILIDALLPFGYELLMCDTDMVWLKNPLPYLARFPGAD 245

Query: 611  VLTSTDQVVPTVVDDRLEIWHQVTGAYNIGIFHWRPTDSAKKLAKEWKEMLLADDKIWDQ 432
            VLTS+DQVVPTVVDDRL+IW QV  AYNIGIFHWRPTDSAKKLA+EWKEMLLADDKIWDQ
Sbjct: 246  VLTSSDQVVPTVVDDRLDIWQQVGAAYNIGIFHWRPTDSAKKLAREWKEMLLADDKIWDQ 305

Query: 431  NGFNEIVHKQLGPSVDSESGLVYAFDGTLKLGLLPASIFCSGHTFFVQVMYQQLQLEPYA 252
            NGFN++V +QLGPSVD +SGL YA+DG LKLGLLPASIFCSGHT+FVQ MYQQL+LEPYA
Sbjct: 306  NGFNDLVRRQLGPSVDEDSGLAYAYDGNLKLGLLPASIFCSGHTYFVQSMYQQLRLEPYA 365

Query: 251  VHTTFQYAGTEGKRHRLREGMVFFDEPEYYNSPGGFLSFKPSIPKSLLLDGEHNVKSHFT 72
            VHTTFQYAGT+GKRHRLRE  VF+D PEYY+SPGGFL+FKPSIPKSLLLDGEHN++SHF 
Sbjct: 366  VHTTFQYAGTDGKRHRLREAKVFYDPPEYYDSPGGFLTFKPSIPKSLLLDGEHNLESHFA 425

Query: 71   LINYQLKQIRTALAIASLLNRIL 3
            LINYQ+KQIRTALAIASLL R L
Sbjct: 426  LINYQMKQIRTALAIASLLKRTL 448


>ref|XP_002519934.1| reticulon3-A3, putative [Ricinus communis]
            gi|223540980|gb|EEF42538.1| reticulon3-A3, putative
            [Ricinus communis]
          Length = 639

 Score =  665 bits (1717), Expect = 0.0
 Identities = 326/446 (73%), Positives = 375/446 (84%), Gaps = 6/446 (1%)
 Frame = -2

Query: 1322 MATWNQQGFCDMAKYRPLFLTVYAAVLVGIVFSSFYVFSAIYGA-KPIYTXXXXXXXXXX 1146
            MA W +  + ++   +PLFLT+YA VL GI+FSSFYVFSA+Y A K   +          
Sbjct: 1    MAVW-RNAYHEVINAKPLFLTIYATVLFGILFSSFYVFSAVYSATKSSSSLSWVSSPPSS 59

Query: 1145 XXXXXPTHNSSRPTVLGGTSDPSSKTRE---SGI--RPIWDIPPIGTKMPPVEAFRLTKA 981
                  + N S+ T     S P++K+++   S I   PIW+IPP  +KM P++ FRLTK 
Sbjct: 60   FSYTDGSVNGSQGTPSTTVSSPTTKSQQDKKSSILETPIWEIPPPNSKMLPIKKFRLTKQ 119

Query: 980  LVKERVKHNIIIVTFGNYAFMDFILNWVKHLTDLNVSNILVGAMDTKLLEALYWKGVPVF 801
            LV++RVK N+IIVTFGN+AFMDFIL WVKHLTDL +SN+LVGAMDTKLLEALYWKGVPVF
Sbjct: 120  LVEKRVKDNVIIVTFGNFAFMDFILTWVKHLTDLGLSNLLVGAMDTKLLEALYWKGVPVF 179

Query: 800  DMGSHMSTTDAGWGSPTFHKMGREKVILIDAMLPFGYELLMCDTDMVWLKNPLPYLACFP 621
            DMGSHMST D GWGSPTFHKMGREKVILIDA LPFG+ELLMCDTDMVWLKNPLPYLA +P
Sbjct: 180  DMGSHMSTADVGWGSPTFHKMGREKVILIDAFLPFGFELLMCDTDMVWLKNPLPYLARYP 239

Query: 620  AADVLTSTDQVVPTVVDDRLEIWHQVTGAYNIGIFHWRPTDSAKKLAKEWKEMLLADDKI 441
             ADVLTS+DQVVPTVVDDRL+IW +V  AYNIGIFHWRPT+S+KKLAKEWKE+LLADDKI
Sbjct: 240  DADVLTSSDQVVPTVVDDRLDIWQEVGAAYNIGIFHWRPTESSKKLAKEWKEILLADDKI 299

Query: 440  WDQNGFNEIVHKQLGPSVDSESGLVYAFDGTLKLGLLPASIFCSGHTFFVQVMYQQLQLE 261
            WDQNGFN+IV +QLGPSVD +SGLVYAFDG LKLG+LPASIFCSGHT+FVQ MYQQL+LE
Sbjct: 300  WDQNGFNDIVRRQLGPSVDDDSGLVYAFDGNLKLGILPASIFCSGHTYFVQAMYQQLRLE 359

Query: 260  PYAVHTTFQYAGTEGKRHRLREGMVFFDEPEYYNSPGGFLSFKPSIPKSLLLDGEHNVKS 81
            PYAVHTTFQYAGTEGKRHRLRE MVF+D PEYY++PGGFLSFKPSIPK LLL+GEHNV+S
Sbjct: 360  PYAVHTTFQYAGTEGKRHRLREAMVFYDPPEYYDAPGGFLSFKPSIPKGLLLNGEHNVES 419

Query: 80   HFTLINYQLKQIRTALAIASLLNRIL 3
            HF+L+NYQ+KQIRTALA+ASLLNR L
Sbjct: 420  HFSLVNYQIKQIRTALAVASLLNRTL 445


>ref|XP_002328759.1| predicted protein [Populus trichocarpa] gi|222839057|gb|EEE77408.1|
            predicted protein [Populus trichocarpa]
          Length = 638

 Score =  659 bits (1700), Expect = 0.0
 Identities = 317/439 (72%), Positives = 368/439 (83%)
 Frame = -2

Query: 1319 ATWNQQGFCDMAKYRPLFLTVYAAVLVGIVFSSFYVFSAIYGAKPIYTXXXXXXXXXXXX 1140
            +TW +  + ++A  +PLF+ +YA V +GIVFSS YV SA+Y A    +            
Sbjct: 13   STW-RNAYQEIANSKPLFVAIYATVFLGIVFSSLYVLSAVYSANSSSSSTSWLSSPPIPT 71

Query: 1139 XXXPTHNSSRPTVLGGTSDPSSKTRESGIRPIWDIPPIGTKMPPVEAFRLTKALVKERVK 960
                T    RP    G+S P+S  +   I+PIW+ PP GTK PP++ FRLTK LV++RVK
Sbjct: 72   SIDNT----RPA---GSSPPTSNPQTMQIKPIWEPPPHGTKFPPLKTFRLTKQLVQQRVK 124

Query: 959  HNIIIVTFGNYAFMDFILNWVKHLTDLNVSNILVGAMDTKLLEALYWKGVPVFDMGSHMS 780
             N+IIVTFGNYAFMDFIL+WVKHLTDL +SN+LVGAMDTKLLEALYWKG+PVFDMGSHMS
Sbjct: 125  DNVIIVTFGNYAFMDFILSWVKHLTDLGLSNLLVGAMDTKLLEALYWKGIPVFDMGSHMS 184

Query: 779  TTDAGWGSPTFHKMGREKVILIDAMLPFGYELLMCDTDMVWLKNPLPYLACFPAADVLTS 600
            T D GWGSPTFHKMGREKVILIDA+LP+G ELLMCDTDMVWLK+PLPYLA +P ADVLTS
Sbjct: 185  TADVGWGSPTFHKMGREKVILIDAILPYGVELLMCDTDMVWLKDPLPYLARYPEADVLTS 244

Query: 599  TDQVVPTVVDDRLEIWHQVTGAYNIGIFHWRPTDSAKKLAKEWKEMLLADDKIWDQNGFN 420
            +DQVVPTVVDD L++W QV  AYNIGIFHWRPT+SAKKLA+EWK+MLLADDKIWDQNGFN
Sbjct: 245  SDQVVPTVVDDSLDLWQQVGAAYNIGIFHWRPTESAKKLAREWKDMLLADDKIWDQNGFN 304

Query: 419  EIVHKQLGPSVDSESGLVYAFDGTLKLGLLPASIFCSGHTFFVQVMYQQLQLEPYAVHTT 240
            +IV KQLGPSVD +SGL YAFDG LKLG+LPASIFCSGHT+FVQ MYQQL+LEPYAVHTT
Sbjct: 305  DIVRKQLGPSVDGDSGLAYAFDGNLKLGVLPASIFCSGHTYFVQAMYQQLRLEPYAVHTT 364

Query: 239  FQYAGTEGKRHRLREGMVFFDEPEYYNSPGGFLSFKPSIPKSLLLDGEHNVKSHFTLINY 60
            FQYAGTEGKRHRLRE MVF+D PEYY++PGGF+SFKPSIPKS+LLDG+HN+++HF+LINY
Sbjct: 365  FQYAGTEGKRHRLREAMVFYDPPEYYDAPGGFVSFKPSIPKSMLLDGDHNLETHFSLINY 424

Query: 59   QLKQIRTALAIASLLNRIL 3
            Q+KQIRTALAIASLL R L
Sbjct: 425  QIKQIRTALAIASLLKRAL 443


>ref|XP_003547737.1| PREDICTED: uncharacterized protein LOC100780346 [Glycine max]
          Length = 638

 Score =  657 bits (1694), Expect = 0.0
 Identities = 319/438 (72%), Positives = 357/438 (81%), Gaps = 3/438 (0%)
 Frame = -2

Query: 1307 QQGFCDMAKYRPLFLTVYAAVLVGIVFSSFYVFSAIYGAKPIYTXXXXXXXXXXXXXXXP 1128
            ++GF ++A  +PLFLT+Y  V++GIV SSFYVFSAIY A P                   
Sbjct: 4    RKGFEEVANSKPLFLTIYTVVIIGIVVSSFYVFSAIYSANPPSAQSSAWLSSISSDATHV 63

Query: 1127 TH---NSSRPTVLGGTSDPSSKTRESGIRPIWDIPPIGTKMPPVEAFRLTKALVKERVKH 957
            T    N S+   +     PS + R    R IWD PP   KMPP++ FRLTK LV++RVK 
Sbjct: 64   TDQTLNVSQSAAVHTVPPPSPRPRNESPRSIWDDPPPNKKMPPLKDFRLTKELVRQRVKD 123

Query: 956  NIIIVTFGNYAFMDFILNWVKHLTDLNVSNILVGAMDTKLLEALYWKGVPVFDMGSHMST 777
            N IIVTFGNYAFMDFIL WVK LTDL VSN LVGAMDTKLLEALYWKG+PVFDMGSHMST
Sbjct: 124  NAIIVTFGNYAFMDFILTWVKQLTDLGVSNFLVGAMDTKLLEALYWKGIPVFDMGSHMST 183

Query: 776  TDAGWGSPTFHKMGREKVILIDAMLPFGYELLMCDTDMVWLKNPLPYLACFPAADVLTST 597
             D GWGSPTFHKMGREKVILID++LPFG+ELLMCDTDMVWLKNPLPYLA +P ADVLTS+
Sbjct: 184  VDVGWGSPTFHKMGREKVILIDSILPFGFELLMCDTDMVWLKNPLPYLARYPEADVLTSS 243

Query: 596  DQVVPTVVDDRLEIWHQVTGAYNIGIFHWRPTDSAKKLAKEWKEMLLADDKIWDQNGFNE 417
            DQV+PTVVDD LE W +V+GAYNIGIFHWRPT+SAKKLAK+WKEMLLADD+IWDQNGFN+
Sbjct: 244  DQVIPTVVDDSLENWPEVSGAYNIGIFHWRPTESAKKLAKQWKEMLLADDQIWDQNGFND 303

Query: 416  IVHKQLGPSVDSESGLVYAFDGTLKLGLLPASIFCSGHTFFVQVMYQQLQLEPYAVHTTF 237
            IVH+QLGPSVD ESGLV+ FDG LKLG+LPASIFCSGHT+F+Q MYQQL+LEPYAVHTTF
Sbjct: 304  IVHRQLGPSVDDESGLVFVFDGKLKLGILPASIFCSGHTYFIQAMYQQLRLEPYAVHTTF 363

Query: 236  QYAGTEGKRHRLREGMVFFDEPEYYNSPGGFLSFKPSIPKSLLLDGEHNVKSHFTLINYQ 57
            QY GTEGKRHRLRE M F D PEYYN  GGFLSFKP IPK+LLL GEHNV+SHFTL+NYQ
Sbjct: 364  QYGGTEGKRHRLREAMHFLDPPEYYNPLGGFLSFKPHIPKNLLLSGEHNVESHFTLVNYQ 423

Query: 56   LKQIRTALAIASLLNRIL 3
            +KQIR ALAIASLLNR L
Sbjct: 424  IKQIRAALAIASLLNRTL 441


Top