BLASTX nr result

ID: Coptis24_contig00012998 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012998
         (1103 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265881.1| PREDICTED: prohibitin-1, mitochondrial [Viti...   396   e-108
gb|AAW83328.1| mitochondrial prohibitin 1 [Petunia x hybrida]         394   e-107
gb|AEJ08743.1| RSI1 [Solanum tuberosum]                               390   e-106
ref|XP_002509571.1| prohibitin, putative [Ricinus communis] gi|2...   388   e-105
gb|AAZ30376.1| PHB1 [Nicotiana benthamiana]                           387   e-105

>ref|XP_002265881.1| PREDICTED: prohibitin-1, mitochondrial [Vitis vinifera]
          Length = 283

 Score =  396 bits (1018), Expect = e-108
 Identities = 210/278 (75%), Positives = 230/278 (82%)
 Frame = -2

Query: 1087 MGSNQAAVSFXXXXXXXXXXXXXXXXXXXXXLYTVDGGQRAVIFDRFRGVLDETVSEGTH 908
            MGS+QAAVSF                     LYTVDGGQRAV+FDRFRGV+D+T+ EGTH
Sbjct: 1    MGSSQAAVSFLTNLARAAFGLGAAASVLNASLYTVDGGQRAVLFDRFRGVIDDTIGEGTH 60

Query: 907  FLIPIIQKPYIFDIRTRPHTFTSTSGTKDLQMVNLTLRLLSRPLVTKLPTIFKTLGTEYD 728
            FL+P +QKPYIFDIRTRPHTF+S SGTKDLQMVNLTLR+LSRP V++LP IFKTLG EYD
Sbjct: 61   FLVPWLQKPYIFDIRTRPHTFSSVSGTKDLQMVNLTLRVLSRPEVSRLPYIFKTLGLEYD 120

Query: 727  EKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALARESLIQRAKDFNIVLDDVAITHLSY 548
            EKVLPSIGNEVLKAVVAQFNADQLLT+RPHVSAL R+SLI+RAKDFNIVLDDVAITHLSY
Sbjct: 121  EKVLPSIGNEVLKAVVAQFNADQLLTDRPHVSALVRDSLIRRAKDFNIVLDDVAITHLSY 180

Query: 547  GLEFSXXXXXXXXXXXXXERSKYVVMKAEQEKRAAVIRAEGESEAAKLISDATAAAGMGL 368
            G EFS             ERSK+VV KAEQE+RAA+IRAEGESE+AKLISDATAAAGMGL
Sbjct: 181  GAEFSKAVEQKQVAQQEAERSKFVVAKAEQERRAAIIRAEGESESAKLISDATAAAGMGL 240

Query: 367  IELRRIEASRENAATLARSGNVMYLPKGNNMLLALNPT 254
            IELRRIEASRE AATLA++ NV YLP GNNMLL LNPT
Sbjct: 241  IELRRIEASREIAATLAKTPNVAYLPGGNNMLLGLNPT 278


>gb|AAW83328.1| mitochondrial prohibitin 1 [Petunia x hybrida]
          Length = 279

 Score =  394 bits (1011), Expect = e-107
 Identities = 212/276 (76%), Positives = 227/276 (82%)
 Frame = -2

Query: 1087 MGSNQAAVSFXXXXXXXXXXXXXXXXXXXXXLYTVDGGQRAVIFDRFRGVLDETVSEGTH 908
            MGSNQAAVSF                     LYTVDGGQRAV+FDRFRGV+D+TV EGTH
Sbjct: 1    MGSNQAAVSFLTNLARAAFGLGISATVVNSSLYTVDGGQRAVLFDRFRGVIDDTVGEGTH 60

Query: 907  FLIPIIQKPYIFDIRTRPHTFTSTSGTKDLQMVNLTLRLLSRPLVTKLPTIFKTLGTEYD 728
            FLIP +QKP+IFDIRTRPHTF+STSGTKDLQMVNLTLR+LSRP V +LP IFKTLG EYD
Sbjct: 61   FLIPWLQKPFIFDIRTRPHTFSSTSGTKDLQMVNLTLRVLSRPEVARLPDIFKTLGLEYD 120

Query: 727  EKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALARESLIQRAKDFNIVLDDVAITHLSY 548
            EKVLPSIGNEVLKAVVAQFNADQLLTERP VSAL RESLI+RAKDFNIVLDDVAITHLSY
Sbjct: 121  EKVLPSIGNEVLKAVVAQFNADQLLTERPQVSALVRESLIRRAKDFNIVLDDVAITHLSY 180

Query: 547  GLEFSXXXXXXXXXXXXXERSKYVVMKAEQEKRAAVIRAEGESEAAKLISDATAAAGMGL 368
            G EFS             ERSK+VVMKAEQE+RAA+IRAEGESE+AKLISDATAAAGMGL
Sbjct: 181  GAEFSKAVEQKQVAQQEAERSKFVVMKAEQERRAAIIRAEGESESAKLISDATAAAGMGL 240

Query: 367  IELRRIEASRENAATLARSGNVMYLPKGNNMLLALN 260
            IELRRIEASRE AATLA++ NV YLPK  NMLL LN
Sbjct: 241  IELRRIEASREVAATLAKTPNVAYLPKQGNMLLGLN 276


>gb|AEJ08743.1| RSI1 [Solanum tuberosum]
          Length = 279

 Score =  390 bits (1001), Expect = e-106
 Identities = 208/278 (74%), Positives = 229/278 (82%)
 Frame = -2

Query: 1087 MGSNQAAVSFXXXXXXXXXXXXXXXXXXXXXLYTVDGGQRAVIFDRFRGVLDETVSEGTH 908
            MGSNQAAVSF                     LYTVDGGQRAV+FDRFRGV+D+TV EGTH
Sbjct: 1    MGSNQAAVSFLTNIARAAFGLGIGATVLNSSLYTVDGGQRAVLFDRFRGVIDDTVGEGTH 60

Query: 907  FLIPIIQKPYIFDIRTRPHTFTSTSGTKDLQMVNLTLRLLSRPLVTKLPTIFKTLGTEYD 728
            FL+P +QKP+IFDIRTRPHTF+S SGTKDLQMV+LTLR+LSRP V++LP IFK LG EYD
Sbjct: 61   FLVPWLQKPFIFDIRTRPHTFSSVSGTKDLQMVHLTLRVLSRPEVSRLPYIFKNLGLEYD 120

Query: 727  EKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALARESLIQRAKDFNIVLDDVAITHLSY 548
            EKVLPSIGNEV+KAVVAQFNADQLLTERP VSAL RESLI+RAKDFNIVLDDVAITHLSY
Sbjct: 121  EKVLPSIGNEVMKAVVAQFNADQLLTERPQVSALVRESLIRRAKDFNIVLDDVAITHLSY 180

Query: 547  GLEFSXXXXXXXXXXXXXERSKYVVMKAEQEKRAAVIRAEGESEAAKLISDATAAAGMGL 368
            G EFS             ERSK+VVMKAEQE+RAA+IRAEGESE+AKLISDATAAAGMGL
Sbjct: 181  GAEFSKAVEQKQVAQQEAERSKFVVMKAEQERRAAIIRAEGESESAKLISDATAAAGMGL 240

Query: 367  IELRRIEASRENAATLARSGNVMYLPKGNNMLLALNPT 254
            IELRRIEASRE A+TLA++ NV YLPK  NMLLAL+PT
Sbjct: 241  IELRRIEASREVASTLAKTPNVAYLPKQGNMLLALSPT 278


>ref|XP_002509571.1| prohibitin, putative [Ricinus communis] gi|223549470|gb|EEF50958.1|
            prohibitin, putative [Ricinus communis]
          Length = 279

 Score =  388 bits (997), Expect = e-105
 Identities = 206/278 (74%), Positives = 229/278 (82%)
 Frame = -2

Query: 1087 MGSNQAAVSFXXXXXXXXXXXXXXXXXXXXXLYTVDGGQRAVIFDRFRGVLDETVSEGTH 908
            MGSNQAAVSF                     LYTVDGGQRAV+FDRFRGV+D T+ EGTH
Sbjct: 1    MGSNQAAVSFLTNLARAAFGLGAAATALNASLYTVDGGQRAVLFDRFRGVIDTTIGEGTH 60

Query: 907  FLIPIIQKPYIFDIRTRPHTFTSTSGTKDLQMVNLTLRLLSRPLVTKLPTIFKTLGTEYD 728
            FLIP +QKP+IFDIRTRPHTF+S SGTKDLQMVNLTLR+LSRP VT+LP IF+ LG EYD
Sbjct: 61   FLIPWLQKPFIFDIRTRPHTFSSVSGTKDLQMVNLTLRVLSRPDVTRLPYIFQHLGLEYD 120

Query: 727  EKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALARESLIQRAKDFNIVLDDVAITHLSY 548
            EKVLPSIGNEVLKAVVAQFNADQLLTERPHVSAL RESLI+RAKDFNIVLDDVAITHLSY
Sbjct: 121  EKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRESLIKRAKDFNIVLDDVAITHLSY 180

Query: 547  GLEFSXXXXXXXXXXXXXERSKYVVMKAEQEKRAAVIRAEGESEAAKLISDATAAAGMGL 368
            G+EFS             ERSK++VMKA+QE+RAA+IRAEGESEAA LIS+AT+ AGMGL
Sbjct: 181  GMEFSRAVEQKQVAQQEAERSKFIVMKADQERRAAIIRAEGESEAAHLISNATSKAGMGL 240

Query: 367  IELRRIEASRENAATLARSGNVMYLPKGNNMLLALNPT 254
            IELRRIEASRE A+TLA+S NV YLP G+NML+ALNP+
Sbjct: 241  IELRRIEASREVASTLAKSPNVAYLPGGSNMLMALNPS 278


>gb|AAZ30376.1| PHB1 [Nicotiana benthamiana]
          Length = 279

 Score =  387 bits (995), Expect = e-105
 Identities = 207/276 (75%), Positives = 227/276 (82%)
 Frame = -2

Query: 1087 MGSNQAAVSFXXXXXXXXXXXXXXXXXXXXXLYTVDGGQRAVIFDRFRGVLDETVSEGTH 908
            MGS+QAAVSF                     LYTVDGGQRAV+FDRFRGV+D+TV EGTH
Sbjct: 1    MGSSQAAVSFLTNVARAAFGLGISATVLNSSLYTVDGGQRAVLFDRFRGVIDDTVGEGTH 60

Query: 907  FLIPIIQKPYIFDIRTRPHTFTSTSGTKDLQMVNLTLRLLSRPLVTKLPTIFKTLGTEYD 728
            FL+P +QKP+IFDIRTRPHTF+S SGTKDLQMV+LTLR+LSRP V++LP IFKTLG EYD
Sbjct: 61   FLVPWLQKPFIFDIRTRPHTFSSVSGTKDLQMVHLTLRVLSRPEVSRLPAIFKTLGLEYD 120

Query: 727  EKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALARESLIQRAKDFNIVLDDVAITHLSY 548
            EKVLPSIGNEVLKAVVAQFNADQLLTERP VSAL RESLI+RAKDFNIVLDDVAITHLSY
Sbjct: 121  EKVLPSIGNEVLKAVVAQFNADQLLTERPQVSALVRESLIRRAKDFNIVLDDVAITHLSY 180

Query: 547  GLEFSXXXXXXXXXXXXXERSKYVVMKAEQEKRAAVIRAEGESEAAKLISDATAAAGMGL 368
            G EFS             ERSK+VVMKAEQE+RAA+IRAEGESE+AKLISDATAAAGMGL
Sbjct: 181  GAEFSKAVEQKQVAQQEAERSKFVVMKAEQERRAAIIRAEGESESAKLISDATAAAGMGL 240

Query: 367  IELRRIEASRENAATLARSGNVMYLPKGNNMLLALN 260
            IELRRIEASRE AAT+A++ NV YLPK  NMLL LN
Sbjct: 241  IELRRIEASREVAATMAKTPNVAYLPKQGNMLLGLN 276


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