BLASTX nr result

ID: Coptis24_contig00012995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012995
         (1119 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140172.1| PREDICTED: uncharacterized protein LOC101221...   349   6e-94
ref|XP_003538086.1| PREDICTED: uncharacterized protein LOC100814...   343   4e-92
emb|CAJ77501.1| expp1 protein precursor [Solanum tuberosum]           342   1e-91
ref|NP_001240927.1| uncharacterized protein LOC100818051 precurs...   340   5e-91
ref|NP_190001.2| uncharacterized protein [Arabidopsis thaliana] ...   339   8e-91

>ref|XP_004140172.1| PREDICTED: uncharacterized protein LOC101221211 [Cucumis sativus]
           gi|449523305|ref|XP_004168664.1| PREDICTED:
           uncharacterized LOC101221211 [Cucumis sativus]
          Length = 262

 Score =  349 bits (896), Expect = 6e-94
 Identities = 169/234 (72%), Positives = 199/234 (85%), Gaps = 1/234 (0%)
 Frame = +1

Query: 181 MLNMLMIVTVSSSNTNDVFQPCADTKVQRNDGFTFGIAFSARPSFFINQTQQLTPCDRRX 360
           ++ ++++V   ++NTN+V+QPCADTK+QR+DGFTFGIAFS+R SFF NQ+ QL+PCDRR 
Sbjct: 31  LMALIVVVHSEAANTNNVYQPCADTKIQRSDGFTFGIAFSSRDSFFANQSHQLSPCDRRL 90

Query: 361 XXXXXXXXXXXVFRPKVDEISLLTINTTSNFFPDSAGGYMVAFAGRKYAARSTPAFVANG 540
                      VFRP+VD+ISLL+INT S+FFPD+ GGYMVAFAGRKYAARS PAFVAN 
Sbjct: 91  SLASLNSQLA-VFRPRVDQISLLSINT-SDFFPDAFGGYMVAFAGRKYAARSQPAFVANS 148

Query: 541 TYTVTSFTLVFEFQKGRLQNLFWKRDGCASC-GSGKSNYVCLNNQDCAIRTSSCKGKGGP 717
           T+ VTSFTLV EFQKGRLQNL+WKRDGCASC G  +S+YVCLNNQDCAIRTSSC+ +GG 
Sbjct: 149 TFIVTSFTLVLEFQKGRLQNLYWKRDGCASCSGKSRSSYVCLNNQDCAIRTSSCRNRGGN 208

Query: 718 VDCSIGIQLAFSGTDKHLRALNSWYEVENLRQYSLYNLYSNLRGSLTDQYNKIF 879
           VDCS+GIQL FSGTDKHL ALNSWYEV+NLRQYSLYN+YSNLR SLT QYN+ F
Sbjct: 209 VDCSLGIQLTFSGTDKHLSALNSWYEVKNLRQYSLYNVYSNLRDSLTGQYNRFF 262


>ref|XP_003538086.1| PREDICTED: uncharacterized protein LOC100814491 [Glycine max]
          Length = 240

 Score =  343 bits (880), Expect = 4e-92
 Identities = 170/235 (72%), Positives = 196/235 (83%), Gaps = 2/235 (0%)
 Frame = +1

Query: 181 MLNMLMIVTVSSSNTNDVFQPCADTKVQRNDGFTFGIAFSARPSFFINQTQ--QLTPCDR 354
           ++ +L+ V  +++NTN+V+QPCAD ++QR+DGFTFGIAFS+R SFF NQ Q  QL+PCDR
Sbjct: 9   LMLLLLSVAAAATNTNNVYQPCADARIQRSDGFTFGIAFSSRDSFFYNQNQSLQLSPCDR 68

Query: 355 RXXXXXXXXXXXXVFRPKVDEISLLTINTTSNFFPDSAGGYMVAFAGRKYAARSTPAFVA 534
           R            +FRP+VDEISLLTINT+S FFPDS GGYMVAFAGRKYAARS  AFVA
Sbjct: 69  RLSLSFSNSQLA-LFRPRVDEISLLTINTSS-FFPDSYGGYMVAFAGRKYAARSPLAFVA 126

Query: 535 NGTYTVTSFTLVFEFQKGRLQNLFWKRDGCASCGSGKSNYVCLNNQDCAIRTSSCKGKGG 714
           N TYTVTSFTLV EFQ+GRLQN +WKRDGC+SC   KSN++CLN QDCAIRTSSCKG+GG
Sbjct: 127 NSTYTVTSFTLVLEFQRGRLQNFYWKRDGCSSCKE-KSNFICLNKQDCAIRTSSCKGRGG 185

Query: 715 PVDCSIGIQLAFSGTDKHLRALNSWYEVENLRQYSLYNLYSNLRGSLTDQYNKIF 879
            VDCS+GIQLAFSGTD+HLR LNSW+EVENLRQYSLY LYSNLR SLT QYNK F
Sbjct: 186 AVDCSLGIQLAFSGTDRHLRVLNSWFEVENLRQYSLYGLYSNLRDSLTGQYNKFF 240


>emb|CAJ77501.1| expp1 protein precursor [Solanum tuberosum]
          Length = 243

 Score =  342 bits (877), Expect = 1e-91
 Identities = 169/247 (68%), Positives = 201/247 (81%)
 Frame = +1

Query: 139 MPITKMGISIVMSTMLNMLMIVTVSSSNTNDVFQPCADTKVQRNDGFTFGIAFSARPSFF 318
           M I ++ + +V   +++ L ++  S S+TN V+ PCAD KVQR+DGF+FGIAF++R SFF
Sbjct: 1   MAIQRLPLLLVF-LLISSLTLLAQSRSDTNHVYSPCADAKVQRSDGFSFGIAFASRTSFF 59

Query: 319 INQTQQLTPCDRRXXXXXXXXXXXXVFRPKVDEISLLTINTTSNFFPDSAGGYMVAFAGR 498
           +N + QL+PCD+R            VFRPKVDEISLLTINT+S FFPDS GGYMVAFAGR
Sbjct: 60  VNSSVQLSPCDKRLSLSSANSQIA-VFRPKVDEISLLTINTSS-FFPDSYGGYMVAFAGR 117

Query: 499 KYAARSTPAFVANGTYTVTSFTLVFEFQKGRLQNLFWKRDGCASCGSGKSNYVCLNNQDC 678
           KYAARS PAFVANGT+TVTSFTLV EF+KGRL+NL+WKRDGC+SC SG SN+VCLN QDC
Sbjct: 118 KYAARSLPAFVANGTFTVTSFTLVHEFKKGRLENLYWKRDGCSSC-SGNSNFVCLNGQDC 176

Query: 679 AIRTSSCKGKGGPVDCSIGIQLAFSGTDKHLRALNSWYEVENLRQYSLYNLYSNLRGSLT 858
           AIRT++CK +GG VDCS+GIQL FSGTDKH    NSW+EV+NLRQYSLY LYSNLRGSLT
Sbjct: 177 AIRTNNCKNRGGNVDCSLGIQLTFSGTDKHASVFNSWFEVKNLRQYSLYGLYSNLRGSLT 236

Query: 859 DQYNKIF 879
           DQYNK F
Sbjct: 237 DQYNKFF 243


>ref|NP_001240927.1| uncharacterized protein LOC100818051 precursor [Glycine max]
           gi|255644951|gb|ACU22975.1| unknown [Glycine max]
          Length = 242

 Score =  340 bits (871), Expect = 5e-91
 Identities = 169/235 (71%), Positives = 193/235 (82%), Gaps = 2/235 (0%)
 Frame = +1

Query: 181 MLNMLMIVTVSSSNTNDVFQPCADTKVQRNDGFTFGIAFSARPSFFINQTQ--QLTPCDR 354
           +L +L  V  +++NTN V+ PC+D ++QR+DGFTFGIAFS+R SFF NQ Q  QL+PCDR
Sbjct: 11  LLPLLSAVAAAATNTNSVYHPCSDARIQRSDGFTFGIAFSSRDSFFYNQNQSLQLSPCDR 70

Query: 355 RXXXXXXXXXXXXVFRPKVDEISLLTINTTSNFFPDSAGGYMVAFAGRKYAARSTPAFVA 534
           R            +FRP+VDEISLLTINT+S FFPD+ GGYMVAFAG+KYAARS  AFVA
Sbjct: 71  RLSLSSSNAQLA-LFRPRVDEISLLTINTSS-FFPDNYGGYMVAFAGKKYAARSPLAFVA 128

Query: 535 NGTYTVTSFTLVFEFQKGRLQNLFWKRDGCASCGSGKSNYVCLNNQDCAIRTSSCKGKGG 714
           N TYTVTSFTLV EFQ+GRL NL+WKRDGC+SC  GKSN VCLN QDCAIRTSSCKG+GG
Sbjct: 129 NSTYTVTSFTLVLEFQRGRLHNLYWKRDGCSSC-KGKSNLVCLNKQDCAIRTSSCKGRGG 187

Query: 715 PVDCSIGIQLAFSGTDKHLRALNSWYEVENLRQYSLYNLYSNLRGSLTDQYNKIF 879
            VDCS+GIQLAFSGTD+HLR LNSW+EVENLRQYSLY LYSNLR SLT QYNK F
Sbjct: 188 AVDCSLGIQLAFSGTDRHLRVLNSWFEVENLRQYSLYGLYSNLRDSLTSQYNKFF 242


>ref|NP_190001.2| uncharacterized protein [Arabidopsis thaliana]
           gi|17529172|gb|AAL38812.1| unknown protein [Arabidopsis
           thaliana] gi|23297558|gb|AAN12895.1| unknown protein
           [Arabidopsis thaliana] gi|332644348|gb|AEE77869.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 246

 Score =  339 bits (869), Expect = 8e-91
 Identities = 163/222 (73%), Positives = 186/222 (83%)
 Frame = +1

Query: 214 SSNTNDVFQPCADTKVQRNDGFTFGIAFSARPSFFINQTQQLTPCDRRXXXXXXXXXXXX 393
           S NTN ++ PC+DT++QR+DGFTFGIAFS+RPSFFINQT  L+PCDRR            
Sbjct: 28  SGNTNTIYSPCSDTRIQRSDGFTFGIAFSSRPSFFINQTVLLSPCDRRLSLAAMNSQFS- 86

Query: 394 VFRPKVDEISLLTINTTSNFFPDSAGGYMVAFAGRKYAARSTPAFVANGTYTVTSFTLVF 573
           VFRPK+DEISLL+INT++ FFPD+ GGYMVAFAGRKYAARS PAF+AN T+ VTSFTLV 
Sbjct: 87  VFRPKIDEISLLSINTSA-FFPDNYGGYMVAFAGRKYAARSIPAFIANSTFIVTSFTLVM 145

Query: 574 EFQKGRLQNLFWKRDGCASCGSGKSNYVCLNNQDCAIRTSSCKGKGGPVDCSIGIQLAFS 753
           EFQKGRLQNL+WKRDGCASC  G  N+VCLN QDCAIRT SCKG+GG VDCS+GIQLAFS
Sbjct: 146 EFQKGRLQNLYWKRDGCASC-KGNQNFVCLNKQDCAIRTPSCKGRGGAVDCSLGIQLAFS 204

Query: 754 GTDKHLRALNSWYEVENLRQYSLYNLYSNLRGSLTDQYNKIF 879
           GTDKHL  LNSWYEVENL+QYSLY LYSNL+ SLT+Q+N  F
Sbjct: 205 GTDKHLAVLNSWYEVENLKQYSLYGLYSNLKSSLTNQFNNFF 246


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