BLASTX nr result

ID: Coptis24_contig00012990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012990
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33952.3| unnamed protein product [Vitis vinifera]               59   4e-07
ref|XP_003543156.1| PREDICTED: uncharacterized protein LOC100819...    57   1e-06
ref|XP_002279231.1| PREDICTED: uncharacterized protein LOC100257...    55   6e-06

>emb|CBI33952.3| unnamed protein product [Vitis vinifera]
          Length = 112

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/44 (63%), Positives = 34/44 (77%)
 Frame = +2

Query: 2   LDAHTEDGLHSVPHLKTVIQLLSNMESSQLSPAFHPNKNQEDPE 133
           LDAH E GL SVPHLKTVIQLL+NMES QL+P    +  +++PE
Sbjct: 60  LDAHIESGLQSVPHLKTVIQLLANMESCQLNPMSEAHLPEKEPE 103


>ref|XP_003543156.1| PREDICTED: uncharacterized protein LOC100819701 [Glycine max]
          Length = 130

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/44 (63%), Positives = 35/44 (79%)
 Frame = +2

Query: 2   LDAHTEDGLHSVPHLKTVIQLLSNMESSQLSPAFHPNKNQEDPE 133
           LDAH E+GL +VPHLKTV+Q+LSNMESSQLS    P+  Q++ E
Sbjct: 78  LDAHMENGLQNVPHLKTVVQVLSNMESSQLSLLSRPHPLQKELE 121


>ref|XP_002279231.1| PREDICTED: uncharacterized protein LOC100257452 [Vitis vinifera]
          Length = 173

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/32 (81%), Positives = 28/32 (87%)
 Frame = +2

Query: 2   LDAHTEDGLHSVPHLKTVIQLLSNMESSQLSP 97
           LDAH E GL SVPHLKTVIQLL+NMES QL+P
Sbjct: 91  LDAHIESGLQSVPHLKTVIQLLANMESCQLNP 122


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