BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012979
         (1296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306262.1| predicted protein [Populus trichocarpa] gi|2...   495   e-138
ref|XP_002309925.1| predicted protein [Populus trichocarpa] gi|1...   489   e-136
ref|XP_003602643.1| E3 ubiquitin-protein ligase mib1 [Medicago t...   485   e-134
ref|XP_003525130.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1...   481   e-133
ref|XP_003631930.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1...   479   e-133

>ref|XP_002306262.1| predicted protein [Populus trichocarpa] gi|222855711|gb|EEE93258.1|
            predicted protein [Populus trichocarpa]
          Length = 351

 Score =  495 bits (1275), Expect = e-138
 Identities = 240/324 (74%), Positives = 269/324 (83%), Gaps = 3/324 (0%)
 Frame = -1

Query: 1296 TKSNEWTGKYSFNRRSLHAIGSTPNPYEQAISIIGRTLSPFDEDNLIPCFGFGDASTHDK 1117
            TKSNEWTG++SF+R+SLHAIGST NPYEQAISIIGRTLSPFDEDNLIPCFGFGDASTHDK
Sbjct: 34   TKSNEWTGRHSFHRKSLHAIGSTLNPYEQAISIIGRTLSPFDEDNLIPCFGFGDASTHDK 93

Query: 1116 FVFRFFAENRYCHGFEEVLFRYREIVPHLKLSGPTSFAPVIDAAIDIVEKSSGQYHVLVI 937
             VF F+ +NR C+G EE L RYREIVPHLKLSGPTSFAP+IDAAIDIVEKS GQYHVLV+
Sbjct: 94   HVFSFYPDNRPCNGLEEALTRYREIVPHLKLSGPTSFAPIIDAAIDIVEKSGGQYHVLVV 153

Query: 936  IADGQVTRNPDTPPGRVSHQEQATINSIVAASHYPLSIILVGVGDGPWDAMHQFDDNIPY 757
            IADGQVTR PDTPPGR S QE AT+NSIVAAS YP+SIILVGVGDGPWDAM QFDDNIP 
Sbjct: 154  IADGQVTRGPDTPPGRFSPQEHATVNSIVAASKYPISIILVGVGDGPWDAMQQFDDNIPQ 213

Query: 756  RAFDNFQFVNFTKIMSENKDTSKKESEFALAALMEIPIQYKATQRLNILEGDNVGXXXXX 577
            RAFDNFQFVNFTKIMS+N + SKKE+ FALAALMEIP+QY+ATQ L +      G     
Sbjct: 214  RAFDNFQFVNFTKIMSDNTEASKKETAFALAALMEIPLQYRATQTLQL------GGPHTR 267

Query: 576  XXXXXPEVIDHDNTVNMYPPMTSVQPVVDMAP---VEQVCPICLTNPKDMAFGCGHLTCK 406
                  EVIDHDN V   P MT+ +PV   AP   VE VCPICL NPKD+AFGCGH+TC+
Sbjct: 268  LLPPPREVIDHDNAVKSIPHMTNFKPVQPTAPTASVEPVCPICLANPKDLAFGCGHMTCR 327

Query: 405  ECSITVSTCPICREPITTRLRLYS 334
            +C  ++S CP+CR+PITTRLRL++
Sbjct: 328  DCGASISACPLCRQPITTRLRLFT 351


>ref|XP_002309925.1| predicted protein [Populus trichocarpa] gi|118486339|gb|ABK95010.1|
            unknown [Populus trichocarpa] gi|222852828|gb|EEE90375.1|
            predicted protein [Populus trichocarpa]
          Length = 364

 Score =  489 bits (1259), Expect = e-136
 Identities = 238/321 (74%), Positives = 269/321 (83%)
 Frame = -1

Query: 1296 TKSNEWTGKYSFNRRSLHAIGSTPNPYEQAISIIGRTLSPFDEDNLIPCFGFGDASTHDK 1117
            TKSNEWTG++SF+R+SLHAIGST NPYEQAISIIGRTLSPFDEDNLIPCFGFGDASTHDK
Sbjct: 45   TKSNEWTGRHSFHRKSLHAIGSTLNPYEQAISIIGRTLSPFDEDNLIPCFGFGDASTHDK 104

Query: 1116 FVFRFFAENRYCHGFEEVLFRYREIVPHLKLSGPTSFAPVIDAAIDIVEKSSGQYHVLVI 937
            +VF F+ +NR C+  EE L RYREIVPHLKLSGPTSFA +I+AAIDIVEKS GQYHVLVI
Sbjct: 105  YVFSFYPDNRPCNDLEEALARYREIVPHLKLSGPTSFAAIINAAIDIVEKS-GQYHVLVI 163

Query: 936  IADGQVTRNPDTPPGRVSHQEQATINSIVAASHYPLSIILVGVGDGPWDAMHQFDDNIPY 757
            IADGQVTR PDTPPGR+S QEQAT+NSIVAAS +PLSII VGVGDGPW+AM QFDDNIP 
Sbjct: 164  IADGQVTRTPDTPPGRLSPQEQATVNSIVAASKHPLSIIFVGVGDGPWNAMQQFDDNIPQ 223

Query: 756  RAFDNFQFVNFTKIMSENKDTSKKESEFALAALMEIPIQYKATQRLNILEGDNVGXXXXX 577
            R FDNFQFVNFTKIM +N + SKKE+ FALAALMEIP+QY+ATQRL   + D VG     
Sbjct: 224  REFDNFQFVNFTKIMLDNTEASKKETAFALAALMEIPLQYRATQRLQHTDHDLVGGPRTR 283

Query: 576  XXXXXPEVIDHDNTVNMYPPMTSVQPVVDMAPVEQVCPICLTNPKDMAFGCGHLTCKECS 397
                  EVIDHDN V   P +T+ + V     VE VCPICLTNPKDMAFGCGHLTC++C 
Sbjct: 284  PLPPPREVIDHDNAVKSIPHITNFETVQPSTSVEPVCPICLTNPKDMAFGCGHLTCRDCG 343

Query: 396  ITVSTCPICREPITTRLRLYS 334
             ++STCPICR+PITTRL+L++
Sbjct: 344  ASLSTCPICRQPITTRLKLFT 364


>ref|XP_003602643.1| E3 ubiquitin-protein ligase mib1 [Medicago truncatula]
            gi|355491691|gb|AES72894.1| E3 ubiquitin-protein ligase
            mib1 [Medicago truncatula]
          Length = 432

 Score =  485 bits (1248), Expect = e-134
 Identities = 236/323 (73%), Positives = 262/323 (81%), Gaps = 2/323 (0%)
 Frame = -1

Query: 1296 TKSNEWTGKYSFNRRSLHAIGSTPNPYEQAISIIGRTLSPFDEDNLIPCFGFGDASTHDK 1117
            TKSNEWTGKYSF+R+SLH IGS PNPYEQAISIIGRTLS FDEDNLIPCFGFGDASTHD+
Sbjct: 110  TKSNEWTGKYSFHRKSLHHIGSAPNPYEQAISIIGRTLSTFDEDNLIPCFGFGDASTHDQ 169

Query: 1116 FVFRFFAENRYCHGFEEVLFRYREIVPHLKLSGPTSFAPVIDAAIDIVEKSSGQYHVLVI 937
             VF F+ +NR CHGFEEVL RYR+IVPHLKLSGPTSFAPVIDAAIDIVE+++GQYHVLVI
Sbjct: 170  NVFSFYPDNRVCHGFEEVLARYRQIVPHLKLSGPTSFAPVIDAAIDIVERNNGQYHVLVI 229

Query: 936  IADGQVTRNPDTPPGRVSHQEQATINSIVAASHYPLSIILVGVGDGPWDAMHQFDDNIPY 757
            IADGQVTRNP TP G++S QEQATI SI+AASHYPLSIILVGVGDGPWD M  FDDNI  
Sbjct: 230  IADGQVTRNPGTPHGKLSPQEQATITSIIAASHYPLSIILVGVGDGPWDEMKHFDDNITG 289

Query: 756  RAFDNFQFVNFTKIMSENKDTSKKESEFALAALMEIPIQYKATQRLNILEGDNVGXXXXX 577
            R FDNFQFVNFTKIMSEN + SKKE+EFALAALMEIP QY+A Q + +   + V      
Sbjct: 290  RVFDNFQFVNFTKIMSENTEASKKETEFALAALMEIPFQYRAAQNIQLANSEPVHYQHKR 349

Query: 576  XXXXXPEVIDHDNTVNMYPPMTSVQPVVDMAP--VEQVCPICLTNPKDMAFGCGHLTCKE 403
                  E+IDHDN     P +T+   +   AP   E VCPICLTNPKDMAFGCGH TCKE
Sbjct: 350  PLPPPKEIIDHDNAFIATPRITNFDSIEPTAPASAEPVCPICLTNPKDMAFGCGHTTCKE 409

Query: 402  CSITVSTCPICREPITTRLRLYS 334
            C  T+S CP+CR+ ITTRLRLY+
Sbjct: 410  CGATLSLCPMCRQQITTRLRLYT 432


>ref|XP_003525130.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1-like [Glycine max]
          Length = 426

 Score =  481 bits (1239), Expect = e-133
 Identities = 236/323 (73%), Positives = 261/323 (80%), Gaps = 2/323 (0%)
 Frame = -1

Query: 1296 TKSNEWTGKYSFNRRSLHAIGSTPNPYEQAISIIGRTLSPFDEDNLIPCFGFGDASTHDK 1117
            TKSNEWTGK+SFN +SLH  G+TPNPYEQAISIIGRTLS FDEDNLIPCFGFGDASTHD+
Sbjct: 104  TKSNEWTGKHSFNHKSLHFTGNTPNPYEQAISIIGRTLSSFDEDNLIPCFGFGDASTHDQ 163

Query: 1116 FVFRFFAENRYCHGFEEVLFRYREIVPHLKLSGPTSFAPVIDAAIDIVEKSSGQYHVLVI 937
             VF F+ +  YCHGFE+VL RYREIVPHLKL+GPTSFAPVIDAA+ IVE+S+GQYHVLVI
Sbjct: 164  NVFSFYPDECYCHGFEQVLARYREIVPHLKLAGPTSFAPVIDAAVGIVERSNGQYHVLVI 223

Query: 936  IADGQVTRNPDTPPGRVSHQEQATINSIVAASHYPLSIILVGVGDGPWDAMHQFDDNIPY 757
            IADGQVTRN DTP G+ S QEQATINSI+AASHYPLSIILVGVGDGPWD M  FDDNI  
Sbjct: 224  IADGQVTRNSDTPHGKFSPQEQATINSIIAASHYPLSIILVGVGDGPWDEMQHFDDNITQ 283

Query: 756  RAFDNFQFVNFTKIMSENKDTSKKESEFALAALMEIPIQYKATQRLNILEGDNVGXXXXX 577
            R FDNFQFVNFTKI SENKD SKKE+ FALAALMEIPIQY+ TQ L I   +        
Sbjct: 284  RLFDNFQFVNFTKITSENKDASKKEAAFALAALMEIPIQYRITQNLQIANENPTSHQRKR 343

Query: 576  XXXXXPEVIDHDNTVNMYPPMTSVQPVVDMAP--VEQVCPICLTNPKDMAFGCGHLTCKE 403
                  EVID DN V   P + + + V   AP  VE VCPICLTNPKDMAFGCGH TCKE
Sbjct: 344  PLPPPKEVIDRDNAVLAVPHVPNFESVEPSAPAAVESVCPICLTNPKDMAFGCGHTTCKE 403

Query: 402  CSITVSTCPICREPITTRLRLYS 334
            C +T+S+CP+CR+ ITTRLRLY+
Sbjct: 404  CGVTLSSCPMCRQEITTRLRLYT 426


>ref|XP_003631930.1| PREDICTED: E3 ubiquitin-protein ligase RGLG1 isoform 2 [Vitis
            vinifera] gi|296088522|emb|CBI37513.3| unnamed protein
            product [Vitis vinifera]
          Length = 367

 Score =  479 bits (1232), Expect = e-133
 Identities = 233/323 (72%), Positives = 268/323 (82%), Gaps = 2/323 (0%)
 Frame = -1

Query: 1296 TKSNEWTGKYSFNRRSLHAIGSTPNPYEQAISIIGRTLSPFDEDNLIPCFGFGDASTHDK 1117
            TKSNEWTG++SF+R+SLHAI +TPNPYEQAISIIGRTLSPFDEDNLIPCFGFGDASTHDK
Sbjct: 45   TKSNEWTGRHSFHRKSLHAISNTPNPYEQAISIIGRTLSPFDEDNLIPCFGFGDASTHDK 104

Query: 1116 FVFRFFAENRYCHGFEEVLFRYREIVPHLKLSGPTSFAPVIDAAIDIVEKSSGQYHVLVI 937
            +VF F+ ++RYC GFEEVL RY+EIVP+LKLSGPTSFAP+IDAAIDIVE S+GQYHVLVI
Sbjct: 105  YVFSFYPDHRYCRGFEEVLARYKEIVPYLKLSGPTSFAPIIDAAIDIVEGSNGQYHVLVI 164

Query: 936  IADGQVTRNPDTPPGRVSHQEQATINSIVAASHYPLSIILVGVGDGPWDAMHQFDDNIPY 757
            IADGQV+ + D   GR S QEQAT+NSIVAAS YPLSIILVGVGDGPWDAM  FDDNIP 
Sbjct: 165  IADGQVSGSLDGSSGRFSPQEQATVNSIVAASRYPLSIILVGVGDGPWDAMKLFDDNIPQ 224

Query: 756  RAFDNFQFVNFTKIMSENKDTSKKESEFALAALMEIPIQYKATQRLNILEGDNVGXXXXX 577
            R+FDNFQFV+F+KIMSEN + SKKE+ FAL+ALMEIP QY+AT RL  ++ + VG     
Sbjct: 225  RSFDNFQFVDFSKIMSENMEASKKETAFALSALMEIPFQYRATLRLQSIDNNLVGGPRTR 284

Query: 576  XXXXXPEVIDHDNTV--NMYPPMTSVQPVVDMAPVEQVCPICLTNPKDMAFGCGHLTCKE 403
                  EV+DHD     +M     SV+ V   APV+QVCPICLTNPK+MAFGCGHLTCKE
Sbjct: 285  PLPPPQEVLDHDREALQHMMATTLSVEAVEQTAPVDQVCPICLTNPKNMAFGCGHLTCKE 344

Query: 402  CSITVSTCPICREPITTRLRLYS 334
            C  ++S CP+CREPI TRL+LYS
Sbjct: 345  CGESISLCPLCREPINTRLKLYS 367