BLASTX nr result

ID: Coptis24_contig00012977 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012977
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320667.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17
tpg|DAA00278.1| TPA_exp: putative phytosulfokine peptide precurs...    91   8e-17
ref|XP_002310329.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_002301142.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
ref|XP_002271337.1| PREDICTED: phytosulfokines 3-like [Vitis vin...    87   1e-15

>ref|XP_002320667.1| predicted protein [Populus trichocarpa] gi|222861440|gb|EEE98982.1|
           predicted protein [Populus trichocarpa]
          Length = 85

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 49/84 (58%), Positives = 61/84 (72%), Gaps = 4/84 (4%)
 Frame = -3

Query: 321 SMSKVSSVFMIAILLFFTLTFAARSNPVLPKDSPVNNQQEHVGAE----MEVDQSCEGIG 154
           S+ KV+++F++A+LL  T+T+AAR  P  P  S   NQ + V AE    ME + SCEG+G
Sbjct: 3   SVVKVATLFLVALLLCSTITYAARPEPGFPGGSLAKNQHKVVEAEHAEVME-EISCEGLG 61

Query: 153 EEECLMRRTLVAHTDYIYTQKNEP 82
           EEECLMRRTL AHTDYIYTQKN P
Sbjct: 62  EEECLMRRTLAAHTDYIYTQKNNP 85


>tpg|DAA00278.1| TPA_exp: putative phytosulfokine peptide precursor [Gossypium
           arboreum]
          Length = 84

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 45/84 (53%), Positives = 59/84 (70%), Gaps = 5/84 (5%)
 Frame = -3

Query: 318 MSKVSSVFMIAILLFFTLTF--AARSNPVLPKDSPVNNQQEHVGAEMEVDQS---CEGIG 154
           M+K++S+F++ +LL  TL+F  AARS P  P DSP   Q +      E++QS   CEG+G
Sbjct: 1   MAKLASLFILTLLLVSTLSFSFAARSGPAFPNDSPAKTQSQGTTTTDEIEQSEDRCEGVG 60

Query: 153 EEECLMRRTLVAHTDYIYTQKNEP 82
           E+ECLMRRTL AH DYIYTQK +P
Sbjct: 61  EDECLMRRTLAAHLDYIYTQKQKP 84


>ref|XP_002310329.1| predicted protein [Populus trichocarpa] gi|222853232|gb|EEE90779.1|
           predicted protein [Populus trichocarpa]
          Length = 84

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 47/80 (58%), Positives = 61/80 (76%), Gaps = 3/80 (3%)
 Frame = -3

Query: 312 KVSSVFMI-AILLFFTLTFAARSNPVLPKDSPVNNQQEHVGAEME--VDQSCEGIGEEEC 142
           KV+++F+I ++LL  TLT+AAR  P  P  S   NQQ+ V AE    +++SCEG+GEEEC
Sbjct: 5   KVTTLFLIVSLLLCSTLTYAARPEPGFPNGSLAKNQQKVVDAEHAEVMEESCEGVGEEEC 64

Query: 141 LMRRTLVAHTDYIYTQKNEP 82
           LMRRTL AHTDYIYTQK++P
Sbjct: 65  LMRRTLAAHTDYIYTQKHKP 84


>ref|XP_002301142.1| predicted protein [Populus trichocarpa] gi|222842868|gb|EEE80415.1|
           predicted protein [Populus trichocarpa]
          Length = 74

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 44/79 (55%), Positives = 56/79 (70%)
 Frame = -3

Query: 318 MSKVSSVFMIAILLFFTLTFAARSNPVLPKDSPVNNQQEHVGAEMEVDQSCEGIGEEECL 139
           MSK++++F +A+LL F LT + R  PVL  DS      + + AE  V +SCEG+GEEECL
Sbjct: 1   MSKLTTLFTVALLLSFALTCSTRPQPVLSDDS-----LDAMAAEAAVVESCEGLGEEECL 55

Query: 138 MRRTLVAHTDYIYTQKNEP 82
           MRRTL AH DYIYTQK +P
Sbjct: 56  MRRTLAAHVDYIYTQKRKP 74


>ref|XP_002271337.1| PREDICTED: phytosulfokines 3-like [Vitis vinifera]
           gi|296088931|emb|CBI38497.3| unnamed protein product
           [Vitis vinifera]
          Length = 82

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 44/79 (55%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
 Frame = -3

Query: 312 KVSSVFMIAILLFFTLTFAARSNPVLPKDSPVNNQQEHVGAEME--VDQSCEGIGEEECL 139
           KV++ F++A+ L  TLT+AAR  P  P D P   Q   V AE    VD +CEG+GE+ECL
Sbjct: 4   KVATFFILALFLCSTLTYAARPQPASPHDFPGKTQHGGVEAERAEVVDGNCEGVGEDECL 63

Query: 138 MRRTLVAHTDYIYTQKNEP 82
           MRRTL AH DYIYTQK +P
Sbjct: 64  MRRTLAAHIDYIYTQKEKP 82


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