BLASTX nr result
ID: Coptis24_contig00012975
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00012975
(1713 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283154.1| PREDICTED: glutamyl-tRNA synthetase, chlorop... 875 0.0
ref|XP_002532486.1| glutamyl-tRNA synthetase 1, 2, putative [Ric... 863 0.0
ref|XP_002313571.1| predicted protein [Populus trichocarpa] gi|2... 860 0.0
ref|XP_002866589.1| ATERS/ERS/OVA3 [Arabidopsis lyrata subsp. ly... 858 0.0
ref|NP_201210.1| glutamyl-tRNA synthetase [Arabidopsis thaliana]... 854 0.0
>ref|XP_002283154.1| PREDICTED: glutamyl-tRNA synthetase, chloroplastic/mitochondrial
[Vitis vinifera] gi|297744457|emb|CBI37719.3| unnamed
protein product [Vitis vinifera]
Length = 566
Score = 875 bits (2261), Expect = 0.0
Identities = 434/543 (79%), Positives = 483/543 (88%), Gaps = 3/543 (0%)
Frame = -1
Query: 1620 MATLVGCKF--IMSFPDVVTRPFLRQTSLSFSPNRRNFSVY-AVDIPNKWNPEQVRVRFA 1450
MA+LVG + I P+V P LR++S F RR+FSV + + P K +VRVRFA
Sbjct: 1 MASLVGSPWMKIRVIPEVAP-PILRRSSSLF---RRSFSVSCSTEAPPKKLEGEVRVRFA 56
Query: 1449 PSPTGNLHVGGARTALFNYLFARSRGGKFVLRIEDTDLERSTKESENAVLQDLSWLGLHW 1270
PSPTGNLHVGGARTALFNYLFARS+GGKFVLRIEDTDLERSTK+SE A+LQDLSWLGLHW
Sbjct: 57 PSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDTDLERSTKQSEEALLQDLSWLGLHW 116
Query: 1269 DEGPGIGGDYGPYRQSERNSLYKHYAEKLLDSGHVYRCFCSNEELAKMKEIAQLKQLPPV 1090
DEGPG+GGDYGPYRQSERNSLYK YAEKLL+SGHVY+CFCSNEEL KMKEIA+LKQLPPV
Sbjct: 117 DEGPGVGGDYGPYRQSERNSLYKQYAEKLLESGHVYQCFCSNEELEKMKEIAKLKQLPPV 176
Query: 1089 YAGKWATSADDQVQAELEKGTPYTYRFRVPKEGTLKIEDLIRGEVSWGLNTLGDFVIMRS 910
Y GKWA++ ++VQ ELE+GTPYTYRFRVPKEG+LKI+DLIRGEV W L+TLGDFVIMRS
Sbjct: 177 YTGKWASATAEEVQEELERGTPYTYRFRVPKEGSLKIDDLIRGEVRWNLDTLGDFVIMRS 236
Query: 909 NGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALIYKALGFPMPYFAHVSLILAPDR 730
NGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQAL+YKALGF MP FAHVSLILAPDR
Sbjct: 237 NGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQALLYKALGFAMPSFAHVSLILAPDR 296
Query: 729 SKLSKRHGATSVGQFKEMGYLPDAMVNYLALLGWGDGTENEFFTLQQLVEKFSIDRVNKS 550
SKLSKRHGATSVGQFKEMG+LP AMVNYLALLGWGDGTENEFFTL+ LVEKFSIDRVNK
Sbjct: 297 SKLSKRHGATSVGQFKEMGFLPQAMVNYLALLGWGDGTENEFFTLKHLVEKFSIDRVNKG 356
Query: 549 GAIFDSAKFRWMNGQHLRALPSEQLVKLLGEQWKVAGILVESEGTFVQEAAELLKDGIDL 370
GAIFDS K RWMNGQHLR+LPSE+L KL+GE+WK GIL +S+G F++EA LLKDGIDL
Sbjct: 357 GAIFDSTKLRWMNGQHLRSLPSEELTKLIGERWKNTGILTQSDGPFIEEAVALLKDGIDL 416
Query: 369 VTDSDKVLSKLLSYPLHSTLASPEGKPVLEDKLSEVATHLLSAYDNGELTVALEEGHTGW 190
+TDSDK LS LLSYPL++TL SPEGKPVLEDKLSEV++ LL+AYD+GEL ALEEG GW
Sbjct: 417 ITDSDKALSNLLSYPLYATLTSPEGKPVLEDKLSEVSSSLLAAYDSGELLQALEEGPAGW 476
Query: 189 QKWVKSFGKSMKRKGKSLFMPLRVLLTGKLHGPDMGLSVILLHKAGKFGLVAPQAGFITL 10
QKWVKSFGKS+KRKGKSLFMPLRVLLTGKLHGPDMG SV+LLH+AG G+VAPQ GF+TL
Sbjct: 477 QKWVKSFGKSLKRKGKSLFMPLRVLLTGKLHGPDMGASVLLLHRAGTCGVVAPQVGFVTL 536
Query: 9 DER 1
++R
Sbjct: 537 EDR 539
>ref|XP_002532486.1| glutamyl-tRNA synthetase 1, 2, putative [Ricinus communis]
gi|223527811|gb|EEF29910.1| glutamyl-tRNA synthetase 1,
2, putative [Ricinus communis]
Length = 577
Score = 863 bits (2231), Expect = 0.0
Identities = 425/507 (83%), Positives = 461/507 (90%)
Frame = -1
Query: 1521 RNFSVYAVDIPNKWNPEQVRVRFAPSPTGNLHVGGARTALFNYLFARSRGGKFVLRIEDT 1342
RNFSV A QVRVRFAPSPTGNLHVGGARTALFNYLFARS+GGKFVLRIEDT
Sbjct: 47 RNFSVSA---GGGGEEGQVRVRFAPSPTGNLHVGGARTALFNYLFARSKGGKFVLRIEDT 103
Query: 1341 DLERSTKESENAVLQDLSWLGLHWDEGPGIGGDYGPYRQSERNSLYKHYAEKLLDSGHVY 1162
DLERSTKESE+A+L+DL+WLGL WDEGP +GGDYGPYRQSERNSLYK YA+KLL+S HVY
Sbjct: 104 DLERSTKESEDALLRDLTWLGLDWDEGPHVGGDYGPYRQSERNSLYKQYADKLLNSAHVY 163
Query: 1161 RCFCSNEELAKMKEIAQLKQLPPVYAGKWATSADDQVQAELEKGTPYTYRFRVPKEGTLK 982
RCFCSNEEL KMKEIA+LKQLPPVY+GKWAT+ D++VQ EL K TPYTYRFRVPKEG+LK
Sbjct: 164 RCFCSNEELEKMKEIAKLKQLPPVYSGKWATATDEEVQEELAKATPYTYRFRVPKEGSLK 223
Query: 981 IEDLIRGEVSWGLNTLGDFVIMRSNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQA 802
I DLIRGEVSW L+TLGDFVIMRSNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQA
Sbjct: 224 INDLIRGEVSWNLDTLGDFVIMRSNGQPVYNFCVTVDDATMAISHVIRAEEHLPNTLRQA 283
Query: 801 LIYKALGFPMPYFAHVSLILAPDRSKLSKRHGATSVGQFKEMGYLPDAMVNYLALLGWGD 622
LIYKALGFPMP FAHVSLILAPDRSKLSKRHGATSVGQF+EMGYLP AMVNYLALLGWGD
Sbjct: 284 LIYKALGFPMPLFAHVSLILAPDRSKLSKRHGATSVGQFREMGYLPQAMVNYLALLGWGD 343
Query: 621 GTENEFFTLQQLVEKFSIDRVNKSGAIFDSAKFRWMNGQHLRALPSEQLVKLLGEQWKVA 442
GTENEFFTL QLVEKFSI RVNKSGAIFDS K RWMNGQHLRAL SE+L+ L+GE+WK
Sbjct: 344 GTENEFFTLDQLVEKFSIGRVNKSGAIFDSTKLRWMNGQHLRALSSEKLINLIGERWKSI 403
Query: 441 GILVESEGTFVQEAAELLKDGIDLVTDSDKVLSKLLSYPLHSTLASPEGKPVLEDKLSEV 262
GILVESEG+F++EA +LLKDGIDLVTDSDK LS LLSYPLH+TL SPEGK V+EDKL EV
Sbjct: 404 GILVESEGSFIEEAVQLLKDGIDLVTDSDKALSNLLSYPLHATLVSPEGKTVVEDKLFEV 463
Query: 261 ATHLLSAYDNGELTVALEEGHTGWQKWVKSFGKSMKRKGKSLFMPLRVLLTGKLHGPDMG 82
++ LL+AYD+GEL ALEEG +GWQKWVK+FGKSMKRKGKSLFMPLR+LLTGKLHGPDMG
Sbjct: 464 SSSLLAAYDSGELLSALEEGPSGWQKWVKNFGKSMKRKGKSLFMPLRLLLTGKLHGPDMG 523
Query: 81 LSVILLHKAGKFGLVAPQAGFITLDER 1
SVILLHKAG G+V+PQAGF+TL ER
Sbjct: 524 ASVILLHKAGNCGIVSPQAGFVTLSER 550
>ref|XP_002313571.1| predicted protein [Populus trichocarpa] gi|222849979|gb|EEE87526.1|
predicted protein [Populus trichocarpa]
Length = 574
Score = 860 bits (2223), Expect = 0.0
Identities = 427/531 (80%), Positives = 473/531 (89%), Gaps = 1/531 (0%)
Frame = -1
Query: 1590 MSFPDVVTRPFLRQTSLSFS-PNRRNFSVYAVDIPNKWNPEQVRVRFAPSPTGNLHVGGA 1414
+SFP + + L SF P RR FSV A+ K EQVRVRFAPSPTGNLHVGGA
Sbjct: 20 ISFPILRSSSSLYNHKFSFLFPTRRRFSVSAIASTEK---EQVRVRFAPSPTGNLHVGGA 76
Query: 1413 RTALFNYLFARSRGGKFVLRIEDTDLERSTKESENAVLQDLSWLGLHWDEGPGIGGDYGP 1234
RTALFNYLFARS+GGKFVLRIEDTDLERSTKESE AVL+DLSWLGL WDEGPG+GGDYGP
Sbjct: 77 RTALFNYLFARSKGGKFVLRIEDTDLERSTKESEEAVLRDLSWLGLDWDEGPGVGGDYGP 136
Query: 1233 YRQSERNSLYKHYAEKLLDSGHVYRCFCSNEELAKMKEIAQLKQLPPVYAGKWATSADDQ 1054
YRQSERNSLYK +AEKL++SGHVYRCFCSNEEL +MKEIA+LKQLPPVY GKWA + DD+
Sbjct: 137 YRQSERNSLYKQHAEKLVESGHVYRCFCSNEELEQMKEIAKLKQLPPVYTGKWANAMDDE 196
Query: 1053 VQAELEKGTPYTYRFRVPKEGTLKIEDLIRGEVSWGLNTLGDFVIMRSNGQPVYNFCVTV 874
VQ EL KGTPYTYRFRVPKEG L I DLIRGEVSW +TLGDFVIMRSNGQPVYNFCVTV
Sbjct: 197 VQEELAKGTPYTYRFRVPKEGRLTINDLIRGEVSWNYDTLGDFVIMRSNGQPVYNFCVTV 256
Query: 873 DDATMAISHVIRAEEHLPNTLRQALIYKALGFPMPYFAHVSLILAPDRSKLSKRHGATSV 694
DDATMAISHVIRAEEHLPNTLRQALIYKALGFPMP+FAHVSLILAPDRSKLSKRHGATSV
Sbjct: 257 DDATMAISHVIRAEEHLPNTLRQALIYKALGFPMPHFAHVSLILAPDRSKLSKRHGATSV 316
Query: 693 GQFKEMGYLPDAMVNYLALLGWGDGTENEFFTLQQLVEKFSIDRVNKSGAIFDSAKFRWM 514
GQ++EMGYLP AMVNYLALLGWGDGTENEFFTL+QLVEKFSI RVNKSGA+FDS K RWM
Sbjct: 317 GQYREMGYLPRAMVNYLALLGWGDGTENEFFTLEQLVEKFSIGRVNKSGAVFDSTKLRWM 376
Query: 513 NGQHLRALPSEQLVKLLGEQWKVAGILVESEGTFVQEAAELLKDGIDLVTDSDKVLSKLL 334
NGQHLRALPS++L KL+GE+WK +GILVESEG F++EA LLKDGI+LVTDSDKVLS LL
Sbjct: 377 NGQHLRALPSDKLNKLVGERWKSSGILVESEGPFIEEAVLLLKDGIELVTDSDKVLSNLL 436
Query: 333 SYPLHSTLASPEGKPVLEDKLSEVATHLLSAYDNGELTVALEEGHTGWQKWVKSFGKSMK 154
SYPLH+TL+SPEGK ++++KLSEV++ LL+AYD+GEL ALEEGH+GWQKWVK+FGK+MK
Sbjct: 437 SYPLHATLSSPEGKVMIQNKLSEVSSGLLAAYDSGELLNALEEGHSGWQKWVKNFGKTMK 496
Query: 153 RKGKSLFMPLRVLLTGKLHGPDMGLSVILLHKAGKFGLVAPQAGFITLDER 1
KGKSLFMPLRVLLTGKLHGPDMG S+ILLH+AG +V+ QA F+TL ER
Sbjct: 497 LKGKSLFMPLRVLLTGKLHGPDMGSSIILLHQAGTGDMVSSQAEFVTLKER 547
>ref|XP_002866589.1| ATERS/ERS/OVA3 [Arabidopsis lyrata subsp. lyrata]
gi|297312424|gb|EFH42848.1| ATERS/ERS/OVA3 [Arabidopsis
lyrata subsp. lyrata]
Length = 570
Score = 858 bits (2216), Expect = 0.0
Identities = 417/531 (78%), Positives = 468/531 (88%)
Frame = -1
Query: 1593 IMSFPDVVTRPFLRQTSLSFSPNRRNFSVYAVDIPNKWNPEQVRVRFAPSPTGNLHVGGA 1414
+ S P++ R+ S F +RR+F+V A P N VRVRFAPSPTGNLHVGGA
Sbjct: 13 VRSLPELAPAFLRRRQSSLFYCSRRSFAVVACSSPVN-NGGSVRVRFAPSPTGNLHVGGA 71
Query: 1413 RTALFNYLFARSRGGKFVLRIEDTDLERSTKESENAVLQDLSWLGLHWDEGPGIGGDYGP 1234
RTALFNYLFARS+GGKFVLRIEDTDLERST+ESE AVLQDLSWLGL WDEGPG+ GD+GP
Sbjct: 72 RTALFNYLFARSKGGKFVLRIEDTDLERSTRESEAAVLQDLSWLGLDWDEGPGVSGDFGP 131
Query: 1233 YRQSERNSLYKHYAEKLLDSGHVYRCFCSNEELAKMKEIAQLKQLPPVYAGKWATSADDQ 1054
YRQSERN+LYK YAEKLL+SGHVYRCFCS+EEL KMKEIA+LKQLPPVY GKWAT++D +
Sbjct: 132 YRQSERNALYKQYAEKLLESGHVYRCFCSSEELVKMKEIAKLKQLPPVYTGKWATASDSE 191
Query: 1053 VQAELEKGTPYTYRFRVPKEGTLKIEDLIRGEVSWGLNTLGDFVIMRSNGQPVYNFCVTV 874
++ ELEKGTP+TYRFRVPKEG+LKI DLIRGEV W L+TLGDFV+MRSNGQPVYNFCVTV
Sbjct: 192 IEQELEKGTPFTYRFRVPKEGSLKINDLIRGEVCWNLDTLGDFVVMRSNGQPVYNFCVTV 251
Query: 873 DDATMAISHVIRAEEHLPNTLRQALIYKALGFPMPYFAHVSLILAPDRSKLSKRHGATSV 694
DDATMAISHVIRAEEHLPNTLRQALIYKAL FPMP FAHVSLILAPDRSKLSKRHGATSV
Sbjct: 252 DDATMAISHVIRAEEHLPNTLRQALIYKALEFPMPQFAHVSLILAPDRSKLSKRHGATSV 311
Query: 693 GQFKEMGYLPDAMVNYLALLGWGDGTENEFFTLQQLVEKFSIDRVNKSGAIFDSAKFRWM 514
GQ++EMGYLP MVNYLALLGWGDGTENEFFTL++LVEKFSI+RVNKSGAIFDS K RWM
Sbjct: 312 GQYREMGYLPQGMVNYLALLGWGDGTENEFFTLEELVEKFSIERVNKSGAIFDSTKLRWM 371
Query: 513 NGQHLRALPSEQLVKLLGEQWKVAGILVESEGTFVQEAAELLKDGIDLVTDSDKVLSKLL 334
NGQHLRALP E+L KL+GE+WK AGIL ESEG+FV EA ELLKDGI+LVTDSDKVL LL
Sbjct: 372 NGQHLRALPKEKLAKLVGERWKSAGILTESEGSFVDEAVELLKDGIELVTDSDKVLLNLL 431
Query: 333 SYPLHSTLASPEGKPVLEDKLSEVATHLLSAYDNGELTVALEEGHTGWQKWVKSFGKSMK 154
SYPLH+TLASPE K +EDKL EVA L++AYD+GE+ ALEEG WQKWVK+FGKS+K
Sbjct: 432 SYPLHATLASPEAKSAVEDKLHEVAASLIAAYDSGEIPSALEEGQGAWQKWVKAFGKSLK 491
Query: 153 RKGKSLFMPLRVLLTGKLHGPDMGLSVILLHKAGKFGLVAPQAGFITLDER 1
RKGKSLFMPLRVLLTGKLHGP+MG S++L+HKAG G+V PQAGF++++ER
Sbjct: 492 RKGKSLFMPLRVLLTGKLHGPEMGTSIVLIHKAGSSGIVVPQAGFVSMEER 542
>ref|NP_201210.1| glutamyl-tRNA synthetase [Arabidopsis thaliana]
gi|30316183|sp|Q9FEA2.1|SYE_ARATH RecName:
Full=Glutamate--tRNA ligase, chloroplastic/mitochondrial;
AltName: Full=Glutamyl-tRNA synthetase; Short=GluRS;
Flags: Precursor gi|11078546|gb|AAG29098.1|AF241841_1
Glu-tRNA synthetase [Arabidopsis thaliana]
gi|10176953|dbj|BAB10273.1| glutamate-tRNA ligase
[Arabidopsis thaliana] gi|332010451|gb|AED97834.1|
glutamyl-tRNA synthetase [Arabidopsis thaliana]
Length = 570
Score = 854 bits (2207), Expect = 0.0
Identities = 416/531 (78%), Positives = 468/531 (88%)
Frame = -1
Query: 1593 IMSFPDVVTRPFLRQTSLSFSPNRRNFSVYAVDIPNKWNPEQVRVRFAPSPTGNLHVGGA 1414
+ S P++ R+ S F +RR+F+V A P N VRVRFAPSPTGNLHVGGA
Sbjct: 13 VRSLPELAPAFLRRRQSSLFYCSRRSFAVVACSTPVN-NGGSVRVRFAPSPTGNLHVGGA 71
Query: 1413 RTALFNYLFARSRGGKFVLRIEDTDLERSTKESENAVLQDLSWLGLHWDEGPGIGGDYGP 1234
RTALFNYLFARS+GGKFVLRIEDTDLERST+ESE AVLQDLSWLGL WDEGPG+ GD+GP
Sbjct: 72 RTALFNYLFARSKGGKFVLRIEDTDLERSTRESEAAVLQDLSWLGLDWDEGPGVSGDFGP 131
Query: 1233 YRQSERNSLYKHYAEKLLDSGHVYRCFCSNEELAKMKEIAQLKQLPPVYAGKWATSADDQ 1054
YRQSERN+LYK YAEKLL+SGHVYRCFCS+EEL KMKE A+LKQLPPVY GKWAT++D +
Sbjct: 132 YRQSERNALYKQYAEKLLESGHVYRCFCSSEELVKMKENAKLKQLPPVYTGKWATASDAE 191
Query: 1053 VQAELEKGTPYTYRFRVPKEGTLKIEDLIRGEVSWGLNTLGDFVIMRSNGQPVYNFCVTV 874
++ ELEKGTP+TYRFRVPKEG+LKI DLIRGEV W L+TLGDFV+MRSNGQPVYNFCVTV
Sbjct: 192 IEQELEKGTPFTYRFRVPKEGSLKINDLIRGEVCWNLDTLGDFVVMRSNGQPVYNFCVTV 251
Query: 873 DDATMAISHVIRAEEHLPNTLRQALIYKALGFPMPYFAHVSLILAPDRSKLSKRHGATSV 694
DDATMAISHVIRAEEHLPNTLRQALIYKAL FPMP FAHVSLILAPDRSKLSKRHGATSV
Sbjct: 252 DDATMAISHVIRAEEHLPNTLRQALIYKALKFPMPQFAHVSLILAPDRSKLSKRHGATSV 311
Query: 693 GQFKEMGYLPDAMVNYLALLGWGDGTENEFFTLQQLVEKFSIDRVNKSGAIFDSAKFRWM 514
GQ++EMGYLP MVNYLALLGWGDGTENEFFTL+ LVEKFSI+RVNKSGAIFDS K RWM
Sbjct: 312 GQYREMGYLPQGMVNYLALLGWGDGTENEFFTLEDLVEKFSIERVNKSGAIFDSTKLRWM 371
Query: 513 NGQHLRALPSEQLVKLLGEQWKVAGILVESEGTFVQEAAELLKDGIDLVTDSDKVLSKLL 334
NGQHLRALP+E+L KL+GE+WK AGIL ESEG+FV EA ELLKDGI+LVTDSDKVL LL
Sbjct: 372 NGQHLRALPNEKLTKLVGERWKSAGILTESEGSFVNEAVELLKDGIELVTDSDKVLLNLL 431
Query: 333 SYPLHSTLASPEGKPVLEDKLSEVATHLLSAYDNGELTVALEEGHTGWQKWVKSFGKSMK 154
SYPLH+TLASPE KP +EDKL EVA L++AYD+GE+ ALEEG WQKWVK+FGKS+K
Sbjct: 432 SYPLHATLASPEAKPAVEDKLHEVAASLIAAYDSGEIPSALEEGQGAWQKWVKAFGKSLK 491
Query: 153 RKGKSLFMPLRVLLTGKLHGPDMGLSVILLHKAGKFGLVAPQAGFITLDER 1
RKGKSLFMPLRVLLTGKLHGP+MG S++L++KAG G+V PQAGF++++ER
Sbjct: 492 RKGKSLFMPLRVLLTGKLHGPEMGTSIVLIYKAGSPGIVVPQAGFVSMEER 542