BLASTX nr result

ID: Coptis24_contig00012971 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012971
         (1317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280909.1| PREDICTED: uncharacterized protein LOC100262...   189   1e-45
ref|XP_002320928.1| predicted protein [Populus trichocarpa] gi|2...   183   1e-43
ref|XP_002515161.1| conserved hypothetical protein [Ricinus comm...   174   6e-41
ref|XP_002302701.1| predicted protein [Populus trichocarpa] gi|2...   174   6e-41
emb|CAN75643.1| hypothetical protein VITISV_029180 [Vitis vinifera]   165   3e-38

>ref|XP_002280909.1| PREDICTED: uncharacterized protein LOC100262404 [Vitis vinifera]
          Length = 292

 Score =  189 bits (481), Expect = 1e-45
 Identities = 123/251 (49%), Positives = 151/251 (60%), Gaps = 23/251 (9%)
 Frame = +1

Query: 271 NLSRLSICSSKQSIFDFDDTCAXXXXXXXXXXXXXXXLSIESSYGEGEADEEFSDDHSKG 450
           NLSRLS+C+      D D+  A               + IESS  +G+ADEE SDD    
Sbjct: 42  NLSRLSMCNLNSMSLDEDEDDANGVGTSI--------MLIESS--DGDADEELSDDKEGK 91

Query: 451 ENVSGASSDSDKDIGSSLSLPGTPRTLQKHGDAHK----EYYCSETEAGGKGFIKNKAKR 618
           E + G  SDSDK+ G   SLP TP   +  G   K    + Y SE EA  K  +K + KR
Sbjct: 92  EELGGLLSDSDKEPGC-YSLPATPPRRRNRGGLLKVVGVKEYASENEAQ-KSSLKQRMKR 149

Query: 619 NSRTRVAREKWLESEWEKKQHKAK--------------SMDGESEG---LVLTKPNGGRK 747
             R +V REK  E  W+ ++ K +              S  GESEG   +V+T+P GGR+
Sbjct: 150 R-RAKVVREKREEMTWDNRKKKEEEGYGSVPCGGGGFTSFSGESEGAGLVVITRPKGGRR 208

Query: 748 SMCMDLGEVKACRDLGFELEHPRMLEIPTQHSF--STMDTASSGGNSPISNWRISSPGDD 921
           S+CMDL EVKACRDLGFELEH RMLEIPT+ S   ST++T SSGGNSPI++WRISSPGDD
Sbjct: 209 SLCMDLEEVKACRDLGFELEHERMLEIPTRISISGSTLET-SSGGNSPIASWRISSPGDD 267

Query: 922 PKDVKARLKVW 954
           P+DVKARLKVW
Sbjct: 268 PRDVKARLKVW 278


>ref|XP_002320928.1| predicted protein [Populus trichocarpa] gi|222861701|gb|EEE99243.1|
           predicted protein [Populus trichocarpa]
          Length = 292

 Score =  183 bits (464), Expect = 1e-43
 Identities = 128/289 (44%), Positives = 162/289 (56%), Gaps = 29/289 (10%)
 Frame = +1

Query: 175 MASDDSMTINSS--MXXXXXXXXXXXXXXXXXXXNLSRLSICSSKQSIFDFDDTCAXXXX 348
           MASD+SM + SS                      NLSRLS+C+S     + DD       
Sbjct: 1   MASDESMALLSSSVQEDDPYDHDTDDGYQPPSLHNLSRLSMCTSSLYTNEDDD-----YQ 55

Query: 349 XXXXXXXXXXXLSIESSYGEGEADEEFSDDHSKGENVS--GASSDSDKDIGSSLSLPGTP 522
                      L  E+     +ADEE SDDH +G N +    SSDSD++ G   SLP TP
Sbjct: 56  DCDGMKMFLSRLPAENF----DADEELSDDHKEGNNKNTLDLSSDSDEEPGC-YSLPATP 110

Query: 523 RTLQKHGDAHKEY-------YCSETEAGGKGFIKNKAKRNSRTR-VAREKWLESE---WE 669
              +  G    +        Y SE EA  KG  + K ++N R R V RE+W+++    ++
Sbjct: 111 PRRRNRGGLINQVQLLGAKDYASENEAQ-KGITRQKMRKNLRKRRVIRERWMDNNNMSFK 169

Query: 670 KKQHK---------AKSMDGESEG---LVLTKPNGGRKSMCMDLGEVKACRDLGFELEHP 813
           KK+ +           S  GESEG   +V+T+P GGR+S+CMDL EVKACRDLGFELEH 
Sbjct: 170 KKEEEMTGVSNYGYCNSFSGESEGGGLVVITRPKGGRRSLCMDLDEVKACRDLGFELEHE 229

Query: 814 RMLEIPTQHSF--STMDTASSGGNSPISNWRISSPGDDPKDVKARLKVW 954
           RMLE+P + S   ST+DT SSGGNSPI+NWRISSPGDDP+DVKARLKVW
Sbjct: 230 RMLEMPGRVSLSGSTLDT-SSGGNSPIANWRISSPGDDPRDVKARLKVW 277


>ref|XP_002515161.1| conserved hypothetical protein [Ricinus communis]
           gi|223545641|gb|EEF47145.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 295

 Score =  174 bits (440), Expect = 6e-41
 Identities = 121/263 (46%), Positives = 154/263 (58%), Gaps = 35/263 (13%)
 Frame = +1

Query: 271 NLSRLSICSSKQSIFDFDDTCAXXXXXXXXXXXXXXXLSIESSYGEGEADEEFSDDHSKG 450
           NLSRLS+C+S     + DD                  LSIES     +ADEE SDD  +G
Sbjct: 33  NLSRLSVCTSSMHTNEDDD-----YQDCDGMKMFMSRLSIESF----DADEELSDDEKEG 83

Query: 451 E-NVSGASSDSDKDIGSSLSLPGTPRTLQKHGDAHK---------EYYCSETEAGGKGFI 600
             ++   SSDSDK+ G   SLP TP   +  G             + Y SE EA  KG  
Sbjct: 84  VISMLDLSSDSDKEPGC-YSLPATPPRRRNRGGGGVVKLRDVVGGKEYASENEAQ-KG-- 139

Query: 601 KNKAKRNSRT--RVAREKWLESEW------EKKQHKA------------KSMDGESEG-- 714
            N  ++NSR   RV RE+W++S+       +KK+ ++             S  GESE   
Sbjct: 140 -NHTRKNSRRKRRVIRERWIDSDNNNNKSDKKKEEESIGLGMCNYYGNGNSFSGESENGG 198

Query: 715 -LVLTKPNGGRKSMCMDLGEVKACRDLGFELEHPRMLEIPTQHSF--STMDTASSGGNSP 885
            +V+T+P GG++++CMDL EVKACRDLGFELEH RMLE+P++ S   ST+DT SSGGNSP
Sbjct: 199 VVVITRPKGGKRALCMDLDEVKACRDLGFELEHERMLEMPSRVSLSGSTLDT-SSGGNSP 257

Query: 886 ISNWRISSPGDDPKDVKARLKVW 954
           I+NWRISSPGDDP+DVKARLKVW
Sbjct: 258 IANWRISSPGDDPRDVKARLKVW 280


>ref|XP_002302701.1| predicted protein [Populus trichocarpa] gi|222844427|gb|EEE81974.1|
           predicted protein [Populus trichocarpa]
          Length = 234

 Score =  174 bits (440), Expect = 6e-41
 Identities = 110/219 (50%), Positives = 141/219 (64%), Gaps = 28/219 (12%)
 Frame = +1

Query: 382 LSIESSYGEGEADEEFSDDHSKG--ENVSGASSDSDKDIGSSLSLPGTPRTLQKHGDAHK 555
           L+IES     +ADEE SDD  +G  +N+   SSDSDK+ G   SLP TP   +  G    
Sbjct: 8   LTIESF----DADEELSDDQKEGNHKNILHLSSDSDKETGC-YSLPATPPRWRNRGGPRN 62

Query: 556 EY-------YCSETEAGGKGFIKNKAKRNSRTR-VAREKWLESE---WEKKQHK------ 684
           +        Y SE EA  KG ++ K ++N R R V RE+ +++    ++KK+ +      
Sbjct: 63  QVQLIGVTDYASENEAQ-KGIMRQKMRKNLRKRRVIRERRMDNSNTSFKKKEEEITGLSN 121

Query: 685 ---AKSMDGESEG---LVLTKPNGGRKSMCMDLGEVKACRDLGFELEHPRMLEIPTQH-- 840
                S  GESEG   +V+T+P GGR+S+CMDL EVKACRDLGFELEH RMLE+P+    
Sbjct: 122 YGSCNSFSGESEGGGLVVITRPKGGRRSLCMDLEEVKACRDLGFELEHERMLELPSSRVS 181

Query: 841 -SFSTMDTASSGGNSPISNWRISSPGDDPKDVKARLKVW 954
            S ST+DT SSGG+SPI+NWRISSPGDDP+DVKARLKVW
Sbjct: 182 LSGSTLDT-SSGGDSPIANWRISSPGDDPRDVKARLKVW 219


>emb|CAN75643.1| hypothetical protein VITISV_029180 [Vitis vinifera]
          Length = 283

 Score =  165 bits (417), Expect = 3e-38
 Identities = 112/241 (46%), Positives = 139/241 (57%), Gaps = 23/241 (9%)
 Frame = +1

Query: 271 NLSRLSICSSKQSIFDFDDTCAXXXXXXXXXXXXXXXLSIESSYGEGEADEEFSDDHSKG 450
           NLSRLS+C+      D D+  A               + IESS  +G+ADEE SDD    
Sbjct: 42  NLSRLSMCNLNSMSLDEDEDDANGVGTSM--------MLIESS--DGDADEELSDDKEGK 91

Query: 451 ENVSGASSDSDKDIGSSLSLPGTPRTLQKHGDAHK----EYYCSETEAGGKGFIKNKAKR 618
           E + G  SDSDK+ G   SLP TP   +  G   K    + Y SE EA  K  +K + KR
Sbjct: 92  EELGGLLSDSDKEPGC-YSLPATPPRRRNRGGLLKVVGVKEYASENEAQ-KSSLKQRMKR 149

Query: 619 NSRTRVAREKWLESEWEKKQHKAK--------------SMDGESEG---LVLTKPNGGRK 747
             R +V REK  E  W+ ++ K +              S  GESEG   +V+T+P GGR+
Sbjct: 150 R-RAKVVREKREEMTWDNRKKKEEEGYGSVPCGGGGFTSFSGESEGAGLVVITRPKGGRR 208

Query: 748 SMCMDLGEVKACRDLGFELEHPRMLEIPTQHSF--STMDTASSGGNSPISNWRISSPGDD 921
           S+CMDL EVKACRDLGFELEH RMLEIPT+ S   ST++T SSGGNSPI++WRISSPG  
Sbjct: 209 SLCMDLEEVKACRDLGFELEHERMLEIPTRISISGSTLET-SSGGNSPIASWRISSPGKP 267

Query: 922 P 924
           P
Sbjct: 268 P 268


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