BLASTX nr result

ID: Coptis24_contig00012947 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012947
         (620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326330.1| predicted protein [Populus trichocarpa] gi|2...   274   8e-72
ref|XP_003597140.1| CCR4-NOT transcription complex subunit [Medi...   270   1e-70
ref|XP_003539106.1| PREDICTED: uncharacterized protein LOC100813...   270   2e-70
ref|XP_002323448.1| predicted protein [Populus trichocarpa] gi|2...   269   3e-70
ref|XP_003539741.1| PREDICTED: uncharacterized protein LOC100801...   268   4e-70

>ref|XP_002326330.1| predicted protein [Populus trichocarpa] gi|222833523|gb|EEE72000.1|
           predicted protein [Populus trichocarpa]
          Length = 257

 Score =  274 bits (701), Expect = 8e-72
 Identities = 128/168 (76%), Positives = 149/168 (88%), Gaps = 1/168 (0%)
 Frame = +1

Query: 118 MSDQGEKTCPLCMEEMDLTDQQLKPCKCGYEICVWCWHQIMDLAEKEDTEGRCPACRTLY 297
           MSD+G+KTCPLC EEMDLTDQQLKPCKCGYE+CVWCW+ IM++A+K+++EGRCPACRT Y
Sbjct: 1   MSDKGDKTCPLCAEEMDLTDQQLKPCKCGYEVCVWCWNHIMEMADKDNSEGRCPACRTPY 60

Query: 298 DKEKIVGTASN-GRLVAEINSERRLKSQKTKPKASDGRKHLSSVRVIQHNLVYIIGIPSD 474
           DKEKIVG A+N  RLVAE++SER+LKS K KPK SDGR HLS+VRVIQ NLVYIIG+P +
Sbjct: 61  DKEKIVGMAANCERLVAEMHSERKLKSHKVKPKTSDGRMHLSNVRVIQRNLVYIIGLPLN 120

Query: 475 LADEELLQHKEYFGQYGKVQKVSIARTAGGAIQHSVNNTCSVYITYLR 618
           LADE LLQ KEYFGQYGKV KVSI+RTA GAIQH+ NN+C VYITY +
Sbjct: 121 LADESLLQRKEYFGQYGKVLKVSISRTATGAIQHAANNSCCVYITYAK 168


>ref|XP_003597140.1| CCR4-NOT transcription complex subunit [Medicago truncatula]
           gi|355486188|gb|AES67391.1| CCR4-NOT transcription
           complex subunit [Medicago truncatula]
          Length = 1007

 Score =  270 bits (691), Expect = 1e-70
 Identities = 124/166 (74%), Positives = 147/166 (88%), Gaps = 1/166 (0%)
 Frame = +1

Query: 118 MSDQGEKTCPLCMEEMDLTDQQLKPCKCGYEICVWCWHQIMDLAEKEDTEGRCPACRTLY 297
           MSD+GE+TCPLC EEMDLTDQQL+PCKCGY+ICVWCWH IMD+AEK++TEGRCPACR+ Y
Sbjct: 1   MSDEGERTCPLCAEEMDLTDQQLRPCKCGYQICVWCWHHIMDMAEKDETEGRCPACRSPY 60

Query: 298 DKEKIVGTASN-GRLVAEINSERRLKSQKTKPKASDGRKHLSSVRVIQHNLVYIIGIPSD 474
           DKEKIVG A+N  RLVAE++ ER++KSQK K K+SDGRK LS+VRVI+ NLVYI+G+P D
Sbjct: 61  DKEKIVGMAANCERLVAEVHMERKMKSQKAKSKSSDGRKQLSNVRVIRRNLVYIVGLPLD 120

Query: 475 LADEELLQHKEYFGQYGKVQKVSIARTAGGAIQHSVNNTCSVYITY 612
           LADE+LLQ +EYFGQYGKV KVS++RTA G +Q   NNTCSVYITY
Sbjct: 121 LADEDLLQRREYFGQYGKVLKVSMSRTAAGVVQQFPNNTCSVYITY 166


>ref|XP_003539106.1| PREDICTED: uncharacterized protein LOC100813427 [Glycine max]
          Length = 1023

 Score =  270 bits (690), Expect = 2e-70
 Identities = 126/166 (75%), Positives = 146/166 (87%), Gaps = 1/166 (0%)
 Frame = +1

Query: 118 MSDQGEKTCPLCMEEMDLTDQQLKPCKCGYEICVWCWHQIMDLAEKEDTEGRCPACRTLY 297
           MSD+GE+TCPLC EEMDLTDQQLKPCKCGYEICVWCWH IMD+AEK+DTEGRCPACR+ Y
Sbjct: 1   MSDEGERTCPLCAEEMDLTDQQLKPCKCGYEICVWCWHHIMDMAEKDDTEGRCPACRSPY 60

Query: 298 DKEKIVGTASN-GRLVAEINSERRLKSQKTKPKASDGRKHLSSVRVIQHNLVYIIGIPSD 474
           DKEKIVGTA+N  RLV  +N E+R+K+QKTK K++DGRK LSSVRVIQ NLVYI+G+P +
Sbjct: 61  DKEKIVGTAANCDRLVNGVNIEKRMKTQKTKSKSTDGRKQLSSVRVIQRNLVYIVGLPLN 120

Query: 475 LADEELLQHKEYFGQYGKVQKVSIARTAGGAIQHSVNNTCSVYITY 612
           LADE+LLQ +EYF QYGKV KVS++RTA G IQ   N+TCSVYITY
Sbjct: 121 LADEDLLQRREYFSQYGKVLKVSMSRTAAGVIQQFPNDTCSVYITY 166


>ref|XP_002323448.1| predicted protein [Populus trichocarpa] gi|222868078|gb|EEF05209.1|
           predicted protein [Populus trichocarpa]
          Length = 258

 Score =  269 bits (687), Expect = 3e-70
 Identities = 127/166 (76%), Positives = 146/166 (87%), Gaps = 1/166 (0%)
 Frame = +1

Query: 118 MSDQGEKTCPLCMEEMDLTDQQLKPCKCGYEICVWCWHQIMDLAEKEDTEGRCPACRTLY 297
           MSD+GEKTCPLC EEMDLTDQQLKPCKCGYEICVWCW+ IM++A K++++GRCPACR  Y
Sbjct: 1   MSDKGEKTCPLCAEEMDLTDQQLKPCKCGYEICVWCWNHIMEMAGKDNSDGRCPACRIPY 60

Query: 298 DKEKIVGTASN-GRLVAEINSERRLKSQKTKPKASDGRKHLSSVRVIQHNLVYIIGIPSD 474
           DKEKIVG A+N  RLVAE+NSER+LKS K KPK S+GR HLS+VRVIQ NLVYIIG+P +
Sbjct: 61  DKEKIVGMAANCERLVAEMNSERKLKSHKGKPKISEGRMHLSNVRVIQRNLVYIIGLPLN 120

Query: 475 LADEELLQHKEYFGQYGKVQKVSIARTAGGAIQHSVNNTCSVYITY 612
           +ADE LLQ +EYFGQYGKV KVSI+RTA GAIQHS NN+C VYITY
Sbjct: 121 IADESLLQRREYFGQYGKVLKVSISRTATGAIQHSANNSCCVYITY 166


>ref|XP_003539741.1| PREDICTED: uncharacterized protein LOC100801880 [Glycine max]
          Length = 1022

 Score =  268 bits (686), Expect = 4e-70
 Identities = 126/166 (75%), Positives = 145/166 (87%), Gaps = 1/166 (0%)
 Frame = +1

Query: 118 MSDQGEKTCPLCMEEMDLTDQQLKPCKCGYEICVWCWHQIMDLAEKEDTEGRCPACRTLY 297
           MSD+GE+TCPLC EEMDLTDQQLKPCKCGYEICVWCWH IMD+AEK+DTEGRCPACR+ Y
Sbjct: 1   MSDEGERTCPLCAEEMDLTDQQLKPCKCGYEICVWCWHHIMDMAEKDDTEGRCPACRSPY 60

Query: 298 DKEKIVGTASN-GRLVAEINSERRLKSQKTKPKASDGRKHLSSVRVIQHNLVYIIGIPSD 474
           DKEKIVGTA+N  RLV  IN E+++K+QK K K+SDGRK LSSVRVIQ NLVYI+G+P +
Sbjct: 61  DKEKIVGTAANCERLVNGINMEKKMKTQKAKSKSSDGRKQLSSVRVIQRNLVYIVGLPLN 120

Query: 475 LADEELLQHKEYFGQYGKVQKVSIARTAGGAIQHSVNNTCSVYITY 612
           LADE+LLQ +EYF QYGKV KVS++RTA G IQ   N+TCSVYITY
Sbjct: 121 LADEDLLQRREYFAQYGKVLKVSMSRTAAGVIQQFPNDTCSVYITY 166


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