BLASTX nr result
ID: Coptis24_contig00012947
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00012947 (620 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002326330.1| predicted protein [Populus trichocarpa] gi|2... 274 8e-72 ref|XP_003597140.1| CCR4-NOT transcription complex subunit [Medi... 270 1e-70 ref|XP_003539106.1| PREDICTED: uncharacterized protein LOC100813... 270 2e-70 ref|XP_002323448.1| predicted protein [Populus trichocarpa] gi|2... 269 3e-70 ref|XP_003539741.1| PREDICTED: uncharacterized protein LOC100801... 268 4e-70 >ref|XP_002326330.1| predicted protein [Populus trichocarpa] gi|222833523|gb|EEE72000.1| predicted protein [Populus trichocarpa] Length = 257 Score = 274 bits (701), Expect = 8e-72 Identities = 128/168 (76%), Positives = 149/168 (88%), Gaps = 1/168 (0%) Frame = +1 Query: 118 MSDQGEKTCPLCMEEMDLTDQQLKPCKCGYEICVWCWHQIMDLAEKEDTEGRCPACRTLY 297 MSD+G+KTCPLC EEMDLTDQQLKPCKCGYE+CVWCW+ IM++A+K+++EGRCPACRT Y Sbjct: 1 MSDKGDKTCPLCAEEMDLTDQQLKPCKCGYEVCVWCWNHIMEMADKDNSEGRCPACRTPY 60 Query: 298 DKEKIVGTASN-GRLVAEINSERRLKSQKTKPKASDGRKHLSSVRVIQHNLVYIIGIPSD 474 DKEKIVG A+N RLVAE++SER+LKS K KPK SDGR HLS+VRVIQ NLVYIIG+P + Sbjct: 61 DKEKIVGMAANCERLVAEMHSERKLKSHKVKPKTSDGRMHLSNVRVIQRNLVYIIGLPLN 120 Query: 475 LADEELLQHKEYFGQYGKVQKVSIARTAGGAIQHSVNNTCSVYITYLR 618 LADE LLQ KEYFGQYGKV KVSI+RTA GAIQH+ NN+C VYITY + Sbjct: 121 LADESLLQRKEYFGQYGKVLKVSISRTATGAIQHAANNSCCVYITYAK 168 >ref|XP_003597140.1| CCR4-NOT transcription complex subunit [Medicago truncatula] gi|355486188|gb|AES67391.1| CCR4-NOT transcription complex subunit [Medicago truncatula] Length = 1007 Score = 270 bits (691), Expect = 1e-70 Identities = 124/166 (74%), Positives = 147/166 (88%), Gaps = 1/166 (0%) Frame = +1 Query: 118 MSDQGEKTCPLCMEEMDLTDQQLKPCKCGYEICVWCWHQIMDLAEKEDTEGRCPACRTLY 297 MSD+GE+TCPLC EEMDLTDQQL+PCKCGY+ICVWCWH IMD+AEK++TEGRCPACR+ Y Sbjct: 1 MSDEGERTCPLCAEEMDLTDQQLRPCKCGYQICVWCWHHIMDMAEKDETEGRCPACRSPY 60 Query: 298 DKEKIVGTASN-GRLVAEINSERRLKSQKTKPKASDGRKHLSSVRVIQHNLVYIIGIPSD 474 DKEKIVG A+N RLVAE++ ER++KSQK K K+SDGRK LS+VRVI+ NLVYI+G+P D Sbjct: 61 DKEKIVGMAANCERLVAEVHMERKMKSQKAKSKSSDGRKQLSNVRVIRRNLVYIVGLPLD 120 Query: 475 LADEELLQHKEYFGQYGKVQKVSIARTAGGAIQHSVNNTCSVYITY 612 LADE+LLQ +EYFGQYGKV KVS++RTA G +Q NNTCSVYITY Sbjct: 121 LADEDLLQRREYFGQYGKVLKVSMSRTAAGVVQQFPNNTCSVYITY 166 >ref|XP_003539106.1| PREDICTED: uncharacterized protein LOC100813427 [Glycine max] Length = 1023 Score = 270 bits (690), Expect = 2e-70 Identities = 126/166 (75%), Positives = 146/166 (87%), Gaps = 1/166 (0%) Frame = +1 Query: 118 MSDQGEKTCPLCMEEMDLTDQQLKPCKCGYEICVWCWHQIMDLAEKEDTEGRCPACRTLY 297 MSD+GE+TCPLC EEMDLTDQQLKPCKCGYEICVWCWH IMD+AEK+DTEGRCPACR+ Y Sbjct: 1 MSDEGERTCPLCAEEMDLTDQQLKPCKCGYEICVWCWHHIMDMAEKDDTEGRCPACRSPY 60 Query: 298 DKEKIVGTASN-GRLVAEINSERRLKSQKTKPKASDGRKHLSSVRVIQHNLVYIIGIPSD 474 DKEKIVGTA+N RLV +N E+R+K+QKTK K++DGRK LSSVRVIQ NLVYI+G+P + Sbjct: 61 DKEKIVGTAANCDRLVNGVNIEKRMKTQKTKSKSTDGRKQLSSVRVIQRNLVYIVGLPLN 120 Query: 475 LADEELLQHKEYFGQYGKVQKVSIARTAGGAIQHSVNNTCSVYITY 612 LADE+LLQ +EYF QYGKV KVS++RTA G IQ N+TCSVYITY Sbjct: 121 LADEDLLQRREYFSQYGKVLKVSMSRTAAGVIQQFPNDTCSVYITY 166 >ref|XP_002323448.1| predicted protein [Populus trichocarpa] gi|222868078|gb|EEF05209.1| predicted protein [Populus trichocarpa] Length = 258 Score = 269 bits (687), Expect = 3e-70 Identities = 127/166 (76%), Positives = 146/166 (87%), Gaps = 1/166 (0%) Frame = +1 Query: 118 MSDQGEKTCPLCMEEMDLTDQQLKPCKCGYEICVWCWHQIMDLAEKEDTEGRCPACRTLY 297 MSD+GEKTCPLC EEMDLTDQQLKPCKCGYEICVWCW+ IM++A K++++GRCPACR Y Sbjct: 1 MSDKGEKTCPLCAEEMDLTDQQLKPCKCGYEICVWCWNHIMEMAGKDNSDGRCPACRIPY 60 Query: 298 DKEKIVGTASN-GRLVAEINSERRLKSQKTKPKASDGRKHLSSVRVIQHNLVYIIGIPSD 474 DKEKIVG A+N RLVAE+NSER+LKS K KPK S+GR HLS+VRVIQ NLVYIIG+P + Sbjct: 61 DKEKIVGMAANCERLVAEMNSERKLKSHKGKPKISEGRMHLSNVRVIQRNLVYIIGLPLN 120 Query: 475 LADEELLQHKEYFGQYGKVQKVSIARTAGGAIQHSVNNTCSVYITY 612 +ADE LLQ +EYFGQYGKV KVSI+RTA GAIQHS NN+C VYITY Sbjct: 121 IADESLLQRREYFGQYGKVLKVSISRTATGAIQHSANNSCCVYITY 166 >ref|XP_003539741.1| PREDICTED: uncharacterized protein LOC100801880 [Glycine max] Length = 1022 Score = 268 bits (686), Expect = 4e-70 Identities = 126/166 (75%), Positives = 145/166 (87%), Gaps = 1/166 (0%) Frame = +1 Query: 118 MSDQGEKTCPLCMEEMDLTDQQLKPCKCGYEICVWCWHQIMDLAEKEDTEGRCPACRTLY 297 MSD+GE+TCPLC EEMDLTDQQLKPCKCGYEICVWCWH IMD+AEK+DTEGRCPACR+ Y Sbjct: 1 MSDEGERTCPLCAEEMDLTDQQLKPCKCGYEICVWCWHHIMDMAEKDDTEGRCPACRSPY 60 Query: 298 DKEKIVGTASN-GRLVAEINSERRLKSQKTKPKASDGRKHLSSVRVIQHNLVYIIGIPSD 474 DKEKIVGTA+N RLV IN E+++K+QK K K+SDGRK LSSVRVIQ NLVYI+G+P + Sbjct: 61 DKEKIVGTAANCERLVNGINMEKKMKTQKAKSKSSDGRKQLSSVRVIQRNLVYIVGLPLN 120 Query: 475 LADEELLQHKEYFGQYGKVQKVSIARTAGGAIQHSVNNTCSVYITY 612 LADE+LLQ +EYF QYGKV KVS++RTA G IQ N+TCSVYITY Sbjct: 121 LADEDLLQRREYFAQYGKVLKVSMSRTAAGVIQQFPNDTCSVYITY 166