BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012946
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275650.1| PREDICTED: glutamyl-tRNA(Gln) amidotransfera...    99   3e-19
ref|XP_002516491.1| Glutamyl-tRNA(Gln) amidotransferase subunit ...    96   4e-18
dbj|BAJ91157.1| predicted protein [Hordeum vulgare subsp. vulgar...    92   3e-17
ref|XP_003556212.1| PREDICTED: aspartyl/glutamyl-tRNA(Asn/Gln) a...    92   6e-17
ref|XP_004161755.1| PREDICTED: glutamyl-tRNA(Gln) amidotransfera...    91   1e-16

>ref|XP_002275650.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit C,
           chloroplastic/mitochondrial [Vitis vinifera]
           gi|353558764|sp|D7STK2.1|GATC_VITVI RecName:
           Full=Glutamyl-tRNA(Gln) amidotransferase subunit C,
           chloroplastic/mitochondrial; Short=Glu-AdT subunit C;
           Flags: Precursor gi|296081596|emb|CBI20601.3| unnamed
           protein product [Vitis vinifera]
          Length = 137

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 47/66 (71%), Positives = 60/66 (90%)
 Frame = -3

Query: 200 KSTSRNFSAHSSLPPPNVARLAQTARISLTDKEVEEFAPKIQQVIDWFGQLQAVDLESIE 21
           ++++R+FS  S+L PP++ RLA+TARISLT  EVEEFAPKI+QVIDWFGQLQAVDL+SIE
Sbjct: 31  RNSTRSFSTRSALLPPDLPRLAETARISLTPHEVEEFAPKIRQVIDWFGQLQAVDLQSIE 90

Query: 20  PALRAD 3
           P++RAD
Sbjct: 91  PSIRAD 96


>ref|XP_002516491.1| Glutamyl-tRNA(Gln) amidotransferase subunit C, putative [Ricinus
           communis] gi|353558760|sp|B9RRX2.1|GATC_RICCO RecName:
           Full=Glutamyl-tRNA(Gln) amidotransferase subunit C,
           chloroplastic/mitochondrial; Short=Glu-AdT subunit C;
           Flags: Precursor gi|223544311|gb|EEF45832.1|
           Glutamyl-tRNA(Gln) amidotransferase subunit C, putative
           [Ricinus communis]
          Length = 143

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 50/73 (68%), Positives = 57/73 (78%), Gaps = 4/73 (5%)
 Frame = -3

Query: 209 SSSKSTSRNFSAH----SSLPPPNVARLAQTARISLTDKEVEEFAPKIQQVIDWFGQLQA 42
           +S   T R FS      SSL PP+V+RLA+TARISL   EVEEFAPKI+QVIDWFGQLQA
Sbjct: 30  ASELLTKRRFSIKATNGSSLQPPDVSRLAETARISLNQNEVEEFAPKIRQVIDWFGQLQA 89

Query: 41  VDLESIEPALRAD 3
           VDL S+EPA+RAD
Sbjct: 90  VDLNSVEPAIRAD 102


>dbj|BAJ91157.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326534308|dbj|BAJ89504.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 145

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 47/71 (66%), Positives = 58/71 (81%)
 Frame = -3

Query: 215 PLSSSKSTSRNFSAHSSLPPPNVARLAQTARISLTDKEVEEFAPKIQQVIDWFGQLQAVD 36
           PLSSS S +   +   +L PP++ RLA +ARISL+ +E EEFAPKIQQV+DWFGQLQ+VD
Sbjct: 34  PLSSSPSAAPT-AGPGALEPPDLPRLANSARISLSPQEAEEFAPKIQQVVDWFGQLQSVD 92

Query: 35  LESIEPALRAD 3
           LESIEP+LRAD
Sbjct: 93  LESIEPSLRAD 103


>ref|XP_003556212.1| PREDICTED: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit
           C-like [Glycine max]
          Length = 143

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 52/99 (52%), Positives = 68/99 (68%), Gaps = 6/99 (6%)
 Frame = -3

Query: 281 IVRGVPLLRKQLNQRSPFV------VNGPLSSSKSTSRNFSAHSSLPPPNVARLAQTARI 120
           ++RG  L    +  RS F       V+  L   +S S   +A SSLPPP++ RLA+TA+I
Sbjct: 6   LLRGASLTANAVWHRSSFFPKVTVSVHPKLVKFQSFSST-TACSSLPPPDLPRLAKTAQI 64

Query: 119 SLTDKEVEEFAPKIQQVIDWFGQLQAVDLESIEPALRAD 3
           SLT  EVEE APKIQQVI+WFGQLQ +DLES+EP++RA+
Sbjct: 65  SLTPNEVEEIAPKIQQVIEWFGQLQGIDLESVEPSIRAE 103


>ref|XP_004161755.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit C,
           chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 145

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 56/107 (52%), Positives = 73/107 (68%), Gaps = 7/107 (6%)
 Frame = -3

Query: 302 MASGVVFIVRGV---PLLRKQLNQRSPF----VVNGPLSSSKSTSRNFSAHSSLPPPNVA 144
           M S  + +++G    P L++Q+   + F    V N  + +S ST+   SA  SL PP+V 
Sbjct: 1   MGSKALPLLKGASSFPSLKRQIFISTAFHSLPVSNISIRNS-STASGISA--SLQPPDVP 57

Query: 143 RLAQTARISLTDKEVEEFAPKIQQVIDWFGQLQAVDLESIEPALRAD 3
           RLAQTARISLT  + EEFAPKI QV+DWFGQLQ VDL+SIEP++RAD
Sbjct: 58  RLAQTARISLTPTQAEEFAPKITQVVDWFGQLQTVDLQSIEPSIRAD 104