BLASTX nr result

ID: Coptis24_contig00012941 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012941
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003565187.1| PREDICTED: ABC transporter B family member 2...   218   3e-70
gb|EEC72270.1| hypothetical protein OsI_05426 [Oryza sativa Indi...   217   5e-70
emb|CAD59584.1| MDR-like ABC transporter [Oryza sativa Japonica ...   217   5e-70
gb|EEE56105.1| hypothetical protein OsJ_04961 [Oryza sativa Japo...   217   5e-70
ref|XP_002459185.1| hypothetical protein SORBIDRAFT_03g047490 [S...   212   6e-69

>ref|XP_003565187.1| PREDICTED: ABC transporter B family member 20-like [Brachypodium
           distachyon]
          Length = 1402

 Score =  218 bits (554), Expect(2) = 3e-70
 Identities = 115/129 (89%), Positives = 122/129 (94%)
 Frame = -2

Query: 528 SQIGMVTQEPALLSLSIRDNIAYGRSAMPDQIEEAAKTMHAHTFISSFEKGYETQVGRAG 349
           SQIG+VTQEPALLSLSIR+NIAYGRSA  DQIEEAAKT HAHTFISS EKGYETQVGRAG
Sbjct: 485 SQIGLVTQEPALLSLSIRENIAYGRSATTDQIEEAAKTAHAHTFISSLEKGYETQVGRAG 544

Query: 348 LALTEEQKIKLSVARAVLSNASILLLDEVTGSLDFEAEGAVQEALDILRLGRSTIIIARR 169
           L+LTEEQKIKLS+ARAVLSN SILLLDEVTG+LDFEAE AVQEALD+L LGRSTIIIARR
Sbjct: 545 LSLTEEQKIKLSIARAVLSNPSILLLDEVTGALDFEAEKAVQEALDVLMLGRSTIIIARR 604

Query: 168 LSLIRNANY 142
           LSLIRNA+Y
Sbjct: 605 LSLIRNADY 613



 Score = 72.8 bits (177), Expect(2) = 3e-70
 Identities = 34/40 (85%), Positives = 37/40 (92%)
 Frame = -3

Query: 143 MEEGQLVEMGTHEELLAIDGLYAELLRCEEAAKLPKRQKV 24
           MEEGQLVEMGTHEELL +DGLYAELL+CEEAAKLPKR  +
Sbjct: 617 MEEGQLVEMGTHEELLNLDGLYAELLKCEEAAKLPKRTPI 656



 Score =  109 bits (273), Expect(2) = 2e-25
 Identities = 57/130 (43%), Positives = 91/130 (70%), Gaps = 2/130 (1%)
 Frame = -2

Query: 528  SQIGMVTQEPALLSLSIRDNIAYGR-SAMPDQIEEAAKTMHAHTFISSFEKGYETQVGRA 352
            S +G+V Q+P + S +IR+NI Y R +A   +++EAA+  +AH FISS   GY+T VG  
Sbjct: 1229 SHMGLVPQDPVIFSTTIRENIIYARHNATESEMKEAARIANAHHFISSLPHGYDTHVGMR 1288

Query: 351  GLALTEEQKIKLSVARAVLSNASILLLDEVTGSLDFEAEGAVQEALDILRLG-RSTIIIA 175
            G+ LT  QK ++++AR VL NA I+LLDE + +++ E+   VQEALD L +G ++TI+IA
Sbjct: 1289 GVDLTPGQKQRIAIARVVLKNAPIVLLDEASSAIESESSRVVQEALDTLIMGNKTTILIA 1348

Query: 174  RRLSLIRNAN 145
             R +++++ +
Sbjct: 1349 HRTAMMKHVD 1358



 Score = 31.2 bits (69), Expect(2) = 2e-25
 Identities = 11/30 (36%), Positives = 22/30 (73%)
 Frame = -3

Query: 152  MLTMEEGQLVEMGTHEELLAIDGLYAELLR 63
            ++ +  G++VE GTH+ L+  +GLY +L++
Sbjct: 1360 IVVLNGGKIVEQGTHDSLVQTNGLYIKLMQ 1389


>gb|EEC72270.1| hypothetical protein OsI_05426 [Oryza sativa Indica Group]
          Length = 1736

 Score =  217 bits (552), Expect(2) = 5e-70
 Identities = 115/129 (89%), Positives = 122/129 (94%)
 Frame = -2

Query: 528 SQIGMVTQEPALLSLSIRDNIAYGRSAMPDQIEEAAKTMHAHTFISSFEKGYETQVGRAG 349
           SQIG+VTQEPALLSLSIR+NIAYGRSA  DQIEEAAKT HAHTFISS EKGY+TQVGRAG
Sbjct: 423 SQIGLVTQEPALLSLSIRENIAYGRSATTDQIEEAAKTAHAHTFISSLEKGYDTQVGRAG 482

Query: 348 LALTEEQKIKLSVARAVLSNASILLLDEVTGSLDFEAEGAVQEALDILRLGRSTIIIARR 169
           L+LTEEQKIKLS+ARAVLSN SILLLDEVTG+LDFEAE AVQEALDIL LGRSTIIIARR
Sbjct: 483 LSLTEEQKIKLSIARAVLSNPSILLLDEVTGALDFEAEKAVQEALDILMLGRSTIIIARR 542

Query: 168 LSLIRNANY 142
           LSLIRNA+Y
Sbjct: 543 LSLIRNADY 551



 Score = 72.8 bits (177), Expect(2) = 5e-70
 Identities = 34/40 (85%), Positives = 37/40 (92%)
 Frame = -3

Query: 143 MEEGQLVEMGTHEELLAIDGLYAELLRCEEAAKLPKRQKV 24
           MEEGQLVEMGTH+ELL +DGLYAELLRCEEAAKLPKR  +
Sbjct: 555 MEEGQLVEMGTHDELLNLDGLYAELLRCEEAAKLPKRTPI 594



 Score =  110 bits (276), Expect(2) = 5e-25
 Identities = 58/130 (44%), Positives = 91/130 (70%), Gaps = 2/130 (1%)
 Frame = -2

Query: 528  SQIGMVTQEPALLSLSIRDNIAYGR-SAMPDQIEEAAKTMHAHTFISSFEKGYETQVGRA 352
            S +G+V Q+P + S +IR+NI Y R +A   +++EAA+  +AH FISS   GY+T VG  
Sbjct: 1167 SHMGLVPQDPVIFSTTIRENIIYARHNATESEMKEAARIANAHHFISSLPHGYDTHVGMR 1226

Query: 351  GLALTEEQKIKLSVARAVLSNASILLLDEVTGSLDFEAEGAVQEALDILRLG-RSTIIIA 175
            G+ LT  QK ++++AR VL NA ILLLDE + +++ E+   VQEALD L +G ++TI+IA
Sbjct: 1227 GVDLTPGQKQRIAIARVVLKNAPILLLDEASSAIESESSRVVQEALDTLIMGNKTTILIA 1286

Query: 174  RRLSLIRNAN 145
             R +++++ +
Sbjct: 1287 HRAAMMKHVD 1296



 Score = 28.5 bits (62), Expect(2) = 5e-25
 Identities = 10/27 (37%), Positives = 19/27 (70%)
 Frame = -3

Query: 152  MLTMEEGQLVEMGTHEELLAIDGLYAE 72
            ++ +  G++VE GTH+ L+  +GLY +
Sbjct: 1298 IVVLNGGKIVEQGTHDSLVQKNGLYGD 1324


>emb|CAD59584.1| MDR-like ABC transporter [Oryza sativa Japonica Group]
           gi|57899519|dbj|BAD87033.1| putative multidrug
           resistance protein 1 homolog [Oryza sativa Japonica
           Group] gi|57899938|dbj|BAD87850.1| putative multidrug
           resistance protein 1 homolog [Oryza sativa Japonica
           Group]
          Length = 1397

 Score =  217 bits (552), Expect(2) = 5e-70
 Identities = 115/129 (89%), Positives = 122/129 (94%)
 Frame = -2

Query: 528 SQIGMVTQEPALLSLSIRDNIAYGRSAMPDQIEEAAKTMHAHTFISSFEKGYETQVGRAG 349
           SQIG+VTQEPALLSLSIR+NIAYGRSA  DQIEEAAKT HAHTFISS EKGY+TQVGRAG
Sbjct: 480 SQIGLVTQEPALLSLSIRENIAYGRSATTDQIEEAAKTAHAHTFISSLEKGYDTQVGRAG 539

Query: 348 LALTEEQKIKLSVARAVLSNASILLLDEVTGSLDFEAEGAVQEALDILRLGRSTIIIARR 169
           L+LTEEQKIKLS+ARAVLSN SILLLDEVTG+LDFEAE AVQEALDIL LGRSTIIIARR
Sbjct: 540 LSLTEEQKIKLSIARAVLSNPSILLLDEVTGALDFEAEKAVQEALDILMLGRSTIIIARR 599

Query: 168 LSLIRNANY 142
           LSLIRNA+Y
Sbjct: 600 LSLIRNADY 608



 Score = 72.8 bits (177), Expect(2) = 5e-70
 Identities = 34/40 (85%), Positives = 37/40 (92%)
 Frame = -3

Query: 143 MEEGQLVEMGTHEELLAIDGLYAELLRCEEAAKLPKRQKV 24
           MEEGQLVEMGTH+ELL +DGLYAELLRCEEAAKLPKR  +
Sbjct: 612 MEEGQLVEMGTHDELLNLDGLYAELLRCEEAAKLPKRTPI 651



 Score =  110 bits (275), Expect(2) = 1e-25
 Identities = 57/130 (43%), Positives = 91/130 (70%), Gaps = 2/130 (1%)
 Frame = -2

Query: 528  SQIGMVTQEPALLSLSIRDNIAYGR-SAMPDQIEEAAKTMHAHTFISSFEKGYETQVGRA 352
            S +G+V Q+P + S +IR+NI Y R +A   +++EAA+  +AH FISS   GY+T VG  
Sbjct: 1224 SHMGLVPQDPVIFSTTIRENIIYARHNATESEMKEAARIANAHHFISSLPHGYDTHVGMR 1283

Query: 351  GLALTEEQKIKLSVARAVLSNASILLLDEVTGSLDFEAEGAVQEALDILRLG-RSTIIIA 175
            G+ LT  QK ++++AR VL NA ILLLDE + +++ E+   VQEALD L +G ++T++IA
Sbjct: 1284 GVDLTPGQKQRIAIARVVLKNAPILLLDEASSAIESESSRVVQEALDTLIMGNKTTVLIA 1343

Query: 174  RRLSLIRNAN 145
             R +++++ +
Sbjct: 1344 HRAAMMKHVD 1353



 Score = 30.8 bits (68), Expect(2) = 1e-25
 Identities = 11/30 (36%), Positives = 22/30 (73%)
 Frame = -3

Query: 152  MLTMEEGQLVEMGTHEELLAIDGLYAELLR 63
            ++ +  G++VE GTH+ L+  +GLY +L++
Sbjct: 1355 IVVLNGGKIVEQGTHDSLVQKNGLYVKLMQ 1384


>gb|EEE56105.1| hypothetical protein OsJ_04961 [Oryza sativa Japonica Group]
          Length = 1225

 Score =  217 bits (552), Expect(2) = 5e-70
 Identities = 115/129 (89%), Positives = 122/129 (94%)
 Frame = -2

Query: 528 SQIGMVTQEPALLSLSIRDNIAYGRSAMPDQIEEAAKTMHAHTFISSFEKGYETQVGRAG 349
           SQIG+VTQEPALLSLSIR+NIAYGRSA  DQIEEAAKT HAHTFISS EKGY+TQVGRAG
Sbjct: 308 SQIGLVTQEPALLSLSIRENIAYGRSATTDQIEEAAKTAHAHTFISSLEKGYDTQVGRAG 367

Query: 348 LALTEEQKIKLSVARAVLSNASILLLDEVTGSLDFEAEGAVQEALDILRLGRSTIIIARR 169
           L+LTEEQKIKLS+ARAVLSN SILLLDEVTG+LDFEAE AVQEALDIL LGRSTIIIARR
Sbjct: 368 LSLTEEQKIKLSIARAVLSNPSILLLDEVTGALDFEAEKAVQEALDILMLGRSTIIIARR 427

Query: 168 LSLIRNANY 142
           LSLIRNA+Y
Sbjct: 428 LSLIRNADY 436



 Score = 72.8 bits (177), Expect(2) = 5e-70
 Identities = 34/40 (85%), Positives = 37/40 (92%)
 Frame = -3

Query: 143 MEEGQLVEMGTHEELLAIDGLYAELLRCEEAAKLPKRQKV 24
           MEEGQLVEMGTH+ELL +DGLYAELLRCEEAAKLPKR  +
Sbjct: 440 MEEGQLVEMGTHDELLNLDGLYAELLRCEEAAKLPKRTPI 479



 Score =  110 bits (275), Expect(2) = 1e-25
 Identities = 57/130 (43%), Positives = 91/130 (70%), Gaps = 2/130 (1%)
 Frame = -2

Query: 528  SQIGMVTQEPALLSLSIRDNIAYGR-SAMPDQIEEAAKTMHAHTFISSFEKGYETQVGRA 352
            S +G+V Q+P + S +IR+NI Y R +A   +++EAA+  +AH FISS   GY+T VG  
Sbjct: 1052 SHMGLVPQDPVIFSTTIRENIIYARHNATESEMKEAARIANAHHFISSLPHGYDTHVGMR 1111

Query: 351  GLALTEEQKIKLSVARAVLSNASILLLDEVTGSLDFEAEGAVQEALDILRLG-RSTIIIA 175
            G+ LT  QK ++++AR VL NA ILLLDE + +++ E+   VQEALD L +G ++T++IA
Sbjct: 1112 GVDLTPGQKQRIAIARVVLKNAPILLLDEASSAIESESSRVVQEALDTLIMGNKTTVLIA 1171

Query: 174  RRLSLIRNAN 145
             R +++++ +
Sbjct: 1172 HRAAMMKHVD 1181



 Score = 30.8 bits (68), Expect(2) = 1e-25
 Identities = 11/30 (36%), Positives = 22/30 (73%)
 Frame = -3

Query: 152  MLTMEEGQLVEMGTHEELLAIDGLYAELLR 63
            ++ +  G++VE GTH+ L+  +GLY +L++
Sbjct: 1183 IVVLNGGKIVEQGTHDSLVQKNGLYVKLMQ 1212


>ref|XP_002459185.1| hypothetical protein SORBIDRAFT_03g047490 [Sorghum bicolor]
           gi|241931160|gb|EES04305.1| hypothetical protein
           SORBIDRAFT_03g047490 [Sorghum bicolor]
          Length = 1403

 Score =  212 bits (540), Expect(2) = 6e-69
 Identities = 113/129 (87%), Positives = 119/129 (92%)
 Frame = -2

Query: 528 SQIGMVTQEPALLSLSIRDNIAYGRSAMPDQIEEAAKTMHAHTFISSFEKGYETQVGRAG 349
           SQIG+VTQEPALLSLSI +NIAYGRSA  DQIEEAAKT H H FISS EKGYETQVGRAG
Sbjct: 486 SQIGLVTQEPALLSLSIMENIAYGRSATTDQIEEAAKTAHVHAFISSLEKGYETQVGRAG 545

Query: 348 LALTEEQKIKLSVARAVLSNASILLLDEVTGSLDFEAEGAVQEALDILRLGRSTIIIARR 169
           L+LTEEQKIKLS+ARAVLSN SILLLDEVTG+LDFEAE AVQEALDIL LGRSTIIIARR
Sbjct: 546 LSLTEEQKIKLSIARAVLSNPSILLLDEVTGALDFEAEKAVQEALDILMLGRSTIIIARR 605

Query: 168 LSLIRNANY 142
           LSLIRNA+Y
Sbjct: 606 LSLIRNADY 614



 Score = 73.9 bits (180), Expect(2) = 6e-69
 Identities = 35/40 (87%), Positives = 37/40 (92%)
 Frame = -3

Query: 143 MEEGQLVEMGTHEELLAIDGLYAELLRCEEAAKLPKRQKV 24
           MEEGQLVEMGTHEELL +DGLYAELLRCEEAAKLPKR  +
Sbjct: 618 MEEGQLVEMGTHEELLNLDGLYAELLRCEEAAKLPKRTPI 657



 Score =  110 bits (276), Expect(2) = 8e-26
 Identities = 58/130 (44%), Positives = 91/130 (70%), Gaps = 2/130 (1%)
 Frame = -2

Query: 528  SQIGMVTQEPALLSLSIRDNIAYGR-SAMPDQIEEAAKTMHAHTFISSFEKGYETQVGRA 352
            S +G+V Q+P + S +IR+NI Y R +A   +++EAA+  +AH FISS   GY+T VG  
Sbjct: 1230 SHMGLVPQDPVIFSTTIRENIIYARHNATESEMKEAARIANAHHFISSLPHGYDTHVGMR 1289

Query: 351  GLALTEEQKIKLSVARAVLSNASILLLDEVTGSLDFEAEGAVQEALDILRLG-RSTIIIA 175
            G+ LT  QK ++++AR VL NA ILLLDE + +++ E+   VQEALD L +G ++TI+IA
Sbjct: 1290 GVDLTPGQKQRIAIARVVLKNAPILLLDEASSAIESESSRVVQEALDTLIMGNKTTILIA 1349

Query: 174  RRLSLIRNAN 145
             R +++++ +
Sbjct: 1350 HRAAMMKHVD 1359



 Score = 31.2 bits (69), Expect(2) = 8e-26
 Identities = 10/30 (33%), Positives = 23/30 (76%)
 Frame = -3

Query: 152  MLTMEEGQLVEMGTHEELLAIDGLYAELLR 63
            ++ +  G++VE G+H+ L+ ++GLY +L++
Sbjct: 1361 IVVLNGGRIVEQGSHDSLVQLNGLYVKLMQ 1390


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