BLASTX nr result

ID: Coptis24_contig00012938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012938
         (1069 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285119.1| PREDICTED: uncharacterized protein LOC100264...   357   2e-96
ref|XP_004146055.1| PREDICTED: uncharacterized protein LOC101214...   333   4e-89
emb|CBI20269.3| unnamed protein product [Vitis vinifera]              322   8e-86
ref|XP_002329077.1| predicted protein [Populus trichocarpa] gi|2...   316   5e-84
ref|XP_002533081.1| conserved hypothetical protein [Ricinus comm...   313   5e-83

>ref|XP_002285119.1| PREDICTED: uncharacterized protein LOC100264152 isoform 1 [Vitis
            vinifera]
          Length = 408

 Score =  357 bits (917), Expect = 2e-96
 Identities = 185/299 (61%), Positives = 214/299 (71%), Gaps = 4/299 (1%)
 Frame = -2

Query: 1008 IPSEWTDQFNSGIQTIAVIQAGHGLLQLGSCQIIPEDLHFVLRMRHTFESLGYQSGFYLS 829
            +P EWTDQF SGIQTIAVIQAGHGLLQLGSC+IIPEDLHFVLRMRHTFESLGYQSGFYLS
Sbjct: 140  LPPEWTDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLS 199

Query: 828  QLFXXXXXXXXXXT-PLKQSIGPSRPPAPIFNWSQRPLPSSTSVIGSPNFHSSARLGLPQ 652
            QLF          + P KQS  PSRPP PIFNW QR LPS+TS++ SPNF +SARLG P 
Sbjct: 200  QLFSSTRNTSSSSSLPSKQSTIPSRPPPPIFNWGQRSLPSATSMLASPNFQNSARLGFPH 259

Query: 651  GKDEAHLFLHPISNDAQMSDMIADHDADIKWPNGLSFFNALTARTDEAKLLFGSESLGNK 472
             KDE H+FL P S++ ++ D++ADH+ DIKWPNGLSF+NALT R+D+AKLLF  E LGNK
Sbjct: 260  TKDETHMFLLPHSSETRIEDIMADHENDIKWPNGLSFYNALTGRSDDAKLLFSPEGLGNK 319

Query: 471  PSQQNHPLGLGGDNSTLAMNYCGNPEESKSISETSNTLXXXXXXXXXXXXXXXNDYLSLE 292
            P Q +HPL L G N         NP    + +E                      +LSL+
Sbjct: 320  PDQNHHPLILEGKNP--------NPHSDSNPNE----------------------FLSLD 349

Query: 291  SHTNNVRKMENKFKRSFTLPARMASSS---TLDHHQHQPVDYSSTEGGIYSDIMETFLE 124
            SH   VRKMENKFKRSFTLPARMASSS   +LDHHQH PV+Y ++E G+Y D+METFLE
Sbjct: 350  SHPETVRKMENKFKRSFTLPARMASSSSSTSLDHHQHHPVEYRNSEAGMYPDVMETFLE 408


>ref|XP_004146055.1| PREDICTED: uncharacterized protein LOC101214651 [Cucumis sativus]
            gi|449522484|ref|XP_004168256.1| PREDICTED:
            uncharacterized LOC101214651 [Cucumis sativus]
          Length = 418

 Score =  333 bits (854), Expect = 4e-89
 Identities = 177/300 (59%), Positives = 210/300 (70%), Gaps = 5/300 (1%)
 Frame = -2

Query: 1008 IPSEWTDQFNSGIQTIAVIQAGHGLLQLGSCQIIPEDLHFVLRMRHTFESLGYQSGFYLS 829
            +P EWTDQF+SGIQTIAVIQAGHGLLQLGSC+IIPEDLHFVLRMRHTFESLGYQSGFYL+
Sbjct: 140  LPPEWTDQFDSGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLT 199

Query: 828  QLFXXXXXXXXXXTPLKQSIGPSRPPAPIFNWSQRPLPSS-TSVIGSPNFHSSARLGLPQ 652
            QLF             KQS  P  PP  + NW+QRP+PS+ TS++ SPNFHSS RLG PQ
Sbjct: 200  QLFSSNRNPSSSPMASKQSAIPIHPPPNLLNWAQRPIPSAPTSLLPSPNFHSSNRLGFPQ 259

Query: 651  GKDEAHLFLHPISNDAQMSDMIADHDADIKWPNGLSFFNALTARTDEAKLLFGSESLGNK 472
             KDE H+FL P S++A+M D++ DH+ DIKWPNGLS FNALT R D+AKLLF  ESLG K
Sbjct: 260  SKDETHMFLLPHSSEARMEDVMGDHENDIKWPNGLSLFNALTGRADDAKLLFNPESLGTK 319

Query: 471  PSQQNHPLGLGGDNSTLAMNYCGNPEESKSISETSNTLXXXXXXXXXXXXXXXNDYLSLE 292
            P Q + PL L   N+        NP    +     N                 N++LSL+
Sbjct: 320  PDQSHIPLILEPKNA--------NPNSDPATMHNMN-------------GGNSNEFLSLD 358

Query: 291  SHTNNVRKMENKFKRSFTLPARMASSS---TLDHHQHQPVDY-SSTEGGIYSDIMETFLE 124
            S + + RKMENKFKRSFTLPARMASSS   +LDHH HQ V+Y +S + G+YSD+MET+LE
Sbjct: 359  SQSESARKMENKFKRSFTLPARMASSSSSTSLDHHPHQSVEYRNSEQAGMYSDVMETYLE 418


>emb|CBI20269.3| unnamed protein product [Vitis vinifera]
          Length = 376

 Score =  322 bits (826), Expect = 8e-86
 Identities = 173/299 (57%), Positives = 201/299 (67%), Gaps = 4/299 (1%)
 Frame = -2

Query: 1008 IPSEWTDQFNSGIQTIAVIQAGHGLLQLGSCQIIPEDLHFVLRMRHTFESLGYQSGFYLS 829
            +P EWTDQF SGIQTIAVIQAGHGLLQLGSC+IIPEDLHFVLRMRHTFESLGYQSGFYLS
Sbjct: 125  LPPEWTDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLS 184

Query: 828  QLFXXXXXXXXXXT-PLKQSIGPSRPPAPIFNWSQRPLPSSTSVIGSPNFHSSARLGLPQ 652
            QLF          + P KQS  PSRPP PIFNW QR LPS+TS++ SPNF +SARLG P 
Sbjct: 185  QLFSSTRNTSSSSSLPSKQSTIPSRPPPPIFNWGQRSLPSATSMLASPNFQNSARLGFPH 244

Query: 651  GKDEAHLFLHPISNDAQMSDMIADHDADIKWPNGLSFFNALTARTDEAKLLFGSESLGNK 472
             KDE H+FL P S++ ++ D++ADH+ DIKWPNGLSF+NALT R                
Sbjct: 245  TKDETHMFLLPHSSETRIEDIMADHENDIKWPNGLSFYNALTGR---------------- 288

Query: 471  PSQQNHPLGLGGDNSTLAMNYCGNPEESKSISETSNTLXXXXXXXXXXXXXXXNDYLSLE 292
             +Q +HPL L G N         NP    + +E                      +LSL+
Sbjct: 289  -NQNHHPLILEGKNP--------NPHSDSNPNE----------------------FLSLD 317

Query: 291  SHTNNVRKMENKFKRSFTLPARMASSS---TLDHHQHQPVDYSSTEGGIYSDIMETFLE 124
            SH   VRKMENKFKRSFTLPARMASSS   +LDHHQH PV+Y ++E G+Y D+METFLE
Sbjct: 318  SHPETVRKMENKFKRSFTLPARMASSSSSTSLDHHQHHPVEYRNSEAGMYPDVMETFLE 376


>ref|XP_002329077.1| predicted protein [Populus trichocarpa] gi|222869746|gb|EEF06877.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score =  316 bits (810), Expect = 5e-84
 Identities = 169/300 (56%), Positives = 198/300 (66%), Gaps = 5/300 (1%)
 Frame = -2

Query: 1008 IPSEWTDQFNSGIQTIAVIQAGHGLLQLGSCQIIPEDLHFVLRMRHTFESLGYQSGFYLS 829
            +PSEWTDQF SGIQTIAVIQAGHGLLQLGSC+IIPEDLHFVLRMRHTFESLGYQSGFYLS
Sbjct: 140  LPSEWTDQFESGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLS 199

Query: 828  QLF-XXXXXXXXXXTPLKQSIGPSRPPAPIFNWSQRPLPSST-SVIGSPNFHS-SARLGL 658
            QLF            P KQS  P+R   P+FNW QRPLPS+  S++ S NF + +ARLG 
Sbjct: 200  QLFSSTRNTSSSSSIPTKQSAIPTRSTQPLFNWGQRPLPSAAPSLLSSQNFQNPAARLGF 259

Query: 657  PQGKDEAHLFLHPISNDAQMSDMIADHDADIKWPNGLSFFNALTARTDEAKLLFGSESLG 478
            PQ KDE H+F+ P S++ +M +M+ +H+ DIKWPNGLSFFNALT R D+AKLLF  ESLG
Sbjct: 260  PQAKDEPHMFILPHSSETRMEEMMGEHENDIKWPNGLSFFNALTGRADDAKLLFNPESLG 319

Query: 477  NKPSQQNHPLGLGGDNSTLAMNYCGNPEESKSISETSNTLXXXXXXXXXXXXXXXNDYLS 298
            NK  + +HP  L G N                                            
Sbjct: 320  NKGDRNHHPHILEGKN-------------------------------------------- 335

Query: 297  LESHTNNVRKMENKFKRSFTLPARMASSS--TLDHHQHQPVDYSSTEGGIYSDIMETFLE 124
               H ++ RKMENKFKRSFTLPARM SSS  ++DHHQH PV+Y + E G+YSD+METFLE
Sbjct: 336  --CHPDSARKMENKFKRSFTLPARMTSSSSTSVDHHQHHPVEYRNPESGVYSDVMETFLE 393


>ref|XP_002533081.1| conserved hypothetical protein [Ricinus communis]
           gi|223527120|gb|EEF29296.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 349

 Score =  313 bits (802), Expect = 5e-83
 Identities = 166/285 (58%), Positives = 200/285 (70%), Gaps = 4/285 (1%)
 Frame = -2

Query: 966 TIAVIQAGHGLLQLGSCQIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFXXXXXXXXXXT 787
           TIAVIQAGHGLLQLGSC+IIPEDLHFVLRMRHTFESLGYQSGFYLSQLF          +
Sbjct: 87  TIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNTSSSSS 146

Query: 786 -PLKQSIGPSRPPAPIFNWSQRPLPSSTSVIGSPNFHSSARLGLPQGKDEAHLFLHPISN 610
            P KQS  P+RPP  +FNW QRPLPS+ S++ SPNF   ARLG PQ KDE H+F+ P + 
Sbjct: 147 IPSKQSAIPTRPPPALFNWGQRPLPSAASMLASPNF-PGARLGFPQAKDEPHMFILPHAA 205

Query: 609 DAQMSDMIADHDADIKWPNGLSFFNALTARTDEAKLLFGSESLGNKPSQQNHPLGLGGDN 430
           + +M +M+ +H+ DIKWPNGLSFFNALT RTD+AKLLF  ESLGNK  Q +HP+ L G N
Sbjct: 206 ENRMEEMMGEHENDIKWPNGLSFFNALTGRTDDAKLLFNPESLGNKADQNHHPIILEGKN 265

Query: 429 STLAMNYCGNPEESKSISETSNTLXXXXXXXXXXXXXXXNDYLSLESHTNNVRKMENKFK 250
                    NP+ S                         N++LSL+SH ++ RKMENKFK
Sbjct: 266 PN------ANPDPSN---------------MHNAGGANPNEFLSLDSHPDSARKMENKFK 304

Query: 249 RSFTLPARMA---SSSTLDHHQHQPVDYSSTEGGIYSDIMETFLE 124
           RSFTLPARMA   SS+++DHHQ QPV+  ++E G+YSD+METFL+
Sbjct: 305 RSFTLPARMATSSSSTSVDHHQQQPVELRNSEAGMYSDVMETFLD 349


Top