BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012922
         (551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325015.1| predicted protein [Populus trichocarpa] gi|2...   189   3e-46
emb|CBI28025.3| unnamed protein product [Vitis vinifera]              183   1e-44
ref|XP_002280643.1| PREDICTED: E3 ubiquitin-protein ligase ATL42...   183   1e-44
ref|XP_002281341.2| PREDICTED: E3 ubiquitin-protein ligase ATL42...   178   4e-43
emb|CAN66948.1| hypothetical protein VITISV_020095 [Vitis vinifera]   178   6e-43

>ref|XP_002325015.1| predicted protein [Populus trichocarpa] gi|222866449|gb|EEF03580.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score =  189 bits (479), Expect = 3e-46
 Identities = 94/140 (67%), Positives = 110/140 (78%)
 Frame = -2

Query: 421 QAPPPLIADDKSPRMTASSFRPSVAVVVGVLSIMFSLTFLLLIYAKFCHNTAPDLLHRHN 242
           QA    I  ++  +   S+FRPS+AVV+G+L ++FSLTF+LLIYAKFCH         H 
Sbjct: 19  QAQNTFIQGNEPSQDAVSNFRPSLAVVIGILFLIFSLTFILLIYAKFCHRGGLV----HG 74

Query: 241 FNQHPTGLVRSTSRFSGIDKTVIESLPFFRFSSLKGSREGLECAVCLSKFEEIETLRLLP 62
            +++   L RS SRFSGIDKTVIESLPFFRF+SLKGSREGLECAVCLSKFE+IE LRLLP
Sbjct: 75  GSENGPALTRSVSRFSGIDKTVIESLPFFRFTSLKGSREGLECAVCLSKFEDIEILRLLP 134

Query: 61  KCKHAFHVNCVDQWLENHSS 2
           KCKHAFH+NCVDQWLE HSS
Sbjct: 135 KCKHAFHINCVDQWLEKHSS 154


>emb|CBI28025.3| unnamed protein product [Vitis vinifera]
          Length = 413

 Score =  183 bits (465), Expect = 1e-44
 Identities = 90/142 (63%), Positives = 113/142 (79%)
 Frame = -2

Query: 427 QSQAPPPLIADDKSPRMTASSFRPSVAVVVGVLSIMFSLTFLLLIYAKFCHNTAPDLLHR 248
           +SQA P    ++ S +   ++F+PS+AVV+G+L++MF LTF+LL+YAK CH  +      
Sbjct: 66  ESQAAPG--QENFSSQDAVTAFKPSLAVVIGILAVMFLLTFILLVYAKLCHRAS------ 117

Query: 247 HNFNQHPTGLVRSTSRFSGIDKTVIESLPFFRFSSLKGSREGLECAVCLSKFEEIETLRL 68
           ++  ++  GL RS SRFSGIDKTVIESLPFFRF SLKGS+EGLECAVCLSKFE+IE LRL
Sbjct: 118 NSDRENQQGLTRSESRFSGIDKTVIESLPFFRFCSLKGSKEGLECAVCLSKFEDIEILRL 177

Query: 67  LPKCKHAFHVNCVDQWLENHSS 2
           LPKCKHAFH++CVDQWLE HSS
Sbjct: 178 LPKCKHAFHIDCVDQWLEKHSS 199


>ref|XP_002280643.1| PREDICTED: E3 ubiquitin-protein ligase ATL42 [Vitis vinifera]
          Length = 423

 Score =  183 bits (465), Expect = 1e-44
 Identities = 90/142 (63%), Positives = 113/142 (79%)
 Frame = -2

Query: 427 QSQAPPPLIADDKSPRMTASSFRPSVAVVVGVLSIMFSLTFLLLIYAKFCHNTAPDLLHR 248
           +SQA P    ++ S +   ++F+PS+AVV+G+L++MF LTF+LL+YAK CH  +      
Sbjct: 20  ESQAAPG--QENFSSQDAVTAFKPSLAVVIGILAVMFLLTFILLVYAKLCHRAS------ 71

Query: 247 HNFNQHPTGLVRSTSRFSGIDKTVIESLPFFRFSSLKGSREGLECAVCLSKFEEIETLRL 68
           ++  ++  GL RS SRFSGIDKTVIESLPFFRF SLKGS+EGLECAVCLSKFE+IE LRL
Sbjct: 72  NSDRENQQGLTRSESRFSGIDKTVIESLPFFRFCSLKGSKEGLECAVCLSKFEDIEILRL 131

Query: 67  LPKCKHAFHVNCVDQWLENHSS 2
           LPKCKHAFH++CVDQWLE HSS
Sbjct: 132 LPKCKHAFHIDCVDQWLEKHSS 153


>ref|XP_002281341.2| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Vitis vinifera]
          Length = 413

 Score =  178 bits (452), Expect = 4e-43
 Identities = 87/120 (72%), Positives = 96/120 (80%)
 Frame = -2

Query: 361 RPSVAVVVGVLSIMFSLTFLLLIYAKFCHNTAPDLLHRHNFNQHPTGLVRSTSRFSGIDK 182
           +P + VVVGVLSIMF LTFLLL YAKFCH   PD     N  Q+  GL R   R SGIDK
Sbjct: 34  QPHLMVVVGVLSIMFCLTFLLLAYAKFCHVAVPDFSDFDNHQQNLHGLDRERLRSSGIDK 93

Query: 181 TVIESLPFFRFSSLKGSREGLECAVCLSKFEEIETLRLLPKCKHAFHVNCVDQWLENHSS 2
            V+ESLPFFRFSSLKGS+EGLECAVCLSKFEEIE LRLLP C+HAFH+NC+DQWLE+HSS
Sbjct: 94  RVMESLPFFRFSSLKGSKEGLECAVCLSKFEEIEVLRLLPNCRHAFHINCIDQWLESHSS 153


>emb|CAN66948.1| hypothetical protein VITISV_020095 [Vitis vinifera]
          Length = 915

 Score =  178 bits (451), Expect = 6e-43
 Identities = 95/163 (58%), Positives = 110/163 (67%)
 Frame = -2

Query: 490 PMNQLVXXXXXXXXXXFKIEAQSQAPPPLIADDKSPRMTASSFRPSVAVVVGVLSIMFSL 311
           PMNQL            +++AQ  +     +D   P       +P + VVVGVLSIMF L
Sbjct: 502 PMNQL-GLVIRVLLFFHRVKAQDTSD----SDHSGPHF----LQPHLMVVVGVLSIMFCL 552

Query: 310 TFLLLIYAKFCHNTAPDLLHRHNFNQHPTGLVRSTSRFSGIDKTVIESLPFFRFSSLKGS 131
           TFLLL YAKFCH   PD     N  Q+  G+ R   R SGIDK V+ESLPFFRFSSLKGS
Sbjct: 553 TFLLLAYAKFCHVAVPDFSDFDNHQQNLHGIDRERLRSSGIDKRVMESLPFFRFSSLKGS 612

Query: 130 REGLECAVCLSKFEEIETLRLLPKCKHAFHVNCVDQWLENHSS 2
           +EGLECAVCLSKFEEIE LRLLP C+HAFH+NC+DQWLE+HSS
Sbjct: 613 KEGLECAVCLSKFEEIEVLRLLPNCRHAFHINCIDQWLESHSS 655