BLASTX nr result

ID: Coptis24_contig00012920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012920
         (2499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16861.3| unnamed protein product [Vitis vinifera]              587   e-165
ref|XP_002283177.1| PREDICTED: translation initiation factor eIF...   587   e-165
ref|XP_002329318.1| predicted protein [Populus trichocarpa] gi|2...   568   e-159
ref|XP_002521202.1| translation initiation factor 2b, delta subu...   565   e-158
ref|XP_003554977.1| PREDICTED: translation initiation factor eIF...   565   e-158

>emb|CBI16861.3| unnamed protein product [Vitis vinifera]
          Length = 492

 Score =  587 bits (1512), Expect = e-165
 Identities = 294/354 (83%), Positives = 318/354 (89%)
 Frame = -3

Query: 1453 VELFRHLPQYEHGTQLPNLESKFFQLDPMHPAVYKVGLQYLTGDVCGGNARCIAMLQAFK 1274
            VELFRHLPQYE GT LP+LESKFF LDPMHPAVYKVGLQYL GDV GGNARCIAMLQAF+
Sbjct: 139  VELFRHLPQYERGTLLPDLESKFFLLDPMHPAVYKVGLQYLAGDVSGGNARCIAMLQAFQ 198

Query: 1273 EAITDYSTPPEKALVRDLTAKISSYVSFMNECRPLSISMGNAIRFLKNRIAKLPLNLSEP 1094
            EAI DYSTPPEK LVRDLTA++SSYVSF+ ECRPLSISMGNAIRFLK+RIAKLPL+LSE 
Sbjct: 199  EAIKDYSTPPEKTLVRDLTARLSSYVSFLIECRPLSISMGNAIRFLKSRIAKLPLSLSES 258

Query: 1093 EAKAILQSDIDRFINEKIVLADKVIVEHAVTKIRDGDVLLTHGASSVVEMILVYAHDIGK 914
            EAKA LQSDI+RFINEKIVLADKVIV HAVTKIRDGDVLLT+G+SS VEMIL+YAH++GK
Sbjct: 259  EAKASLQSDINRFINEKIVLADKVIVRHAVTKIRDGDVLLTYGSSSAVEMILLYAHELGK 318

Query: 913  QFRVVVVDSRPXXXXXXXXXXXXXXXLSCTYTHINAISYIMHEVTRVFLGASSVLCNGTV 734
            QFRVVVVDSRP               LSCTYTHINA+SYIMHEVTRVFLGASSVL NGTV
Sbjct: 319  QFRVVVVDSRPKLEGQLLLRRLVGKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTV 378

Query: 733  YSRVGSACVSMVASAFRVPVLICCEAYKFHERVQLDSICSNELGDPDTISKVPGREDVNH 554
            YSRVG+ACVSMVA AFRVPVL+CCEAYKF+ERVQLDSICSNELGDPD ISKVPGRE++N+
Sbjct: 379  YSRVGTACVSMVAHAFRVPVLVCCEAYKFYERVQLDSICSNELGDPDAISKVPGREEINY 438

Query: 553  LENWSDSETLQLLNLTYDVTPSDYVSMIITDYGMVPPTSVPVIVREYMREPLWM 392
            L++W+ SE LQLLNL YD TPSDYVSMIITDYGMVPPTSVPVIVREY RE LW+
Sbjct: 439  LDDWAKSENLQLLNLIYDATPSDYVSMIITDYGMVPPTSVPVIVREYRREHLWI 492



 Score = 70.1 bits (170), Expect = 3e-09
 Identities = 44/103 (42%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
 Frame = -2

Query: 1940 VETKNDRPTSSKPLKEKTSXXXXXXXXXXXXXXXXXXXXEGGRHTGAIASGGPA---HAK 1770
            +E +N++P SS+ LKEKTS                    E  +    IA+ G A   +AK
Sbjct: 14   IEVQNEQPASSRSLKEKTSKAERRALQEAQRAAKAAAKAEVSK--APIAASGVATSVNAK 71

Query: 1769 TTKVVNNPPQKKDAPPTVVPEKKGSDRPPEKDRKKDIPPPRMQ 1641
              KV     QKKD+      EKKG DRPPEKDRKKD+P PRMQ
Sbjct: 72   PAKVSKLSSQKKDSASVTASEKKGVDRPPEKDRKKDVPHPRMQ 114


>ref|XP_002283177.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like
            [Vitis vinifera]
          Length = 650

 Score =  587 bits (1512), Expect = e-165
 Identities = 294/354 (83%), Positives = 318/354 (89%)
 Frame = -3

Query: 1453 VELFRHLPQYEHGTQLPNLESKFFQLDPMHPAVYKVGLQYLTGDVCGGNARCIAMLQAFK 1274
            VELFRHLPQYE GT LP+LESKFF LDPMHPAVYKVGLQYL GDV GGNARCIAMLQAF+
Sbjct: 297  VELFRHLPQYERGTLLPDLESKFFLLDPMHPAVYKVGLQYLAGDVSGGNARCIAMLQAFQ 356

Query: 1273 EAITDYSTPPEKALVRDLTAKISSYVSFMNECRPLSISMGNAIRFLKNRIAKLPLNLSEP 1094
            EAI DYSTPPEK LVRDLTA++SSYVSF+ ECRPLSISMGNAIRFLK+RIAKLPL+LSE 
Sbjct: 357  EAIKDYSTPPEKTLVRDLTARLSSYVSFLIECRPLSISMGNAIRFLKSRIAKLPLSLSES 416

Query: 1093 EAKAILQSDIDRFINEKIVLADKVIVEHAVTKIRDGDVLLTHGASSVVEMILVYAHDIGK 914
            EAKA LQSDI+RFINEKIVLADKVIV HAVTKIRDGDVLLT+G+SS VEMIL+YAH++GK
Sbjct: 417  EAKASLQSDINRFINEKIVLADKVIVRHAVTKIRDGDVLLTYGSSSAVEMILLYAHELGK 476

Query: 913  QFRVVVVDSRPXXXXXXXXXXXXXXXLSCTYTHINAISYIMHEVTRVFLGASSVLCNGTV 734
            QFRVVVVDSRP               LSCTYTHINA+SYIMHEVTRVFLGASSVL NGTV
Sbjct: 477  QFRVVVVDSRPKLEGQLLLRRLVGKGLSCTYTHINAVSYIMHEVTRVFLGASSVLSNGTV 536

Query: 733  YSRVGSACVSMVASAFRVPVLICCEAYKFHERVQLDSICSNELGDPDTISKVPGREDVNH 554
            YSRVG+ACVSMVA AFRVPVL+CCEAYKF+ERVQLDSICSNELGDPD ISKVPGRE++N+
Sbjct: 537  YSRVGTACVSMVAHAFRVPVLVCCEAYKFYERVQLDSICSNELGDPDAISKVPGREEINY 596

Query: 553  LENWSDSETLQLLNLTYDVTPSDYVSMIITDYGMVPPTSVPVIVREYMREPLWM 392
            L++W+ SE LQLLNL YD TPSDYVSMIITDYGMVPPTSVPVIVREY RE LW+
Sbjct: 597  LDDWAKSENLQLLNLIYDATPSDYVSMIITDYGMVPPTSVPVIVREYRREHLWI 650



 Score = 72.8 bits (177), Expect = 4e-10
 Identities = 50/126 (39%), Positives = 63/126 (50%), Gaps = 10/126 (7%)
 Frame = -2

Query: 1988 ASFTTVSAVKM-------ADKGLVETKNDRPTSSKPLKEKTSXXXXXXXXXXXXXXXXXX 1830
            ++ TTVS V M       +    +E +N++P SS+ LKEKTS                  
Sbjct: 149  SNLTTVSVVNMPPGISVKSGGASIEVQNEQPASSRSLKEKTSKAERRALQEAQRAAKAAA 208

Query: 1829 XXEGGRHTGAIASGGPA---HAKTTKVVNNPPQKKDAPPTVVPEKKGSDRPPEKDRKKDI 1659
              E  +    IA+ G A   +AK  KV     QKKD+      EKKG DRPPEKDRKKD+
Sbjct: 209  KAEVSK--APIAASGVATSVNAKPAKVSKLSSQKKDSASVTASEKKGVDRPPEKDRKKDV 266

Query: 1658 PPPRMQ 1641
            P PRMQ
Sbjct: 267  PHPRMQ 272


>ref|XP_002329318.1| predicted protein [Populus trichocarpa] gi|222870772|gb|EEF07903.1|
            predicted protein [Populus trichocarpa]
          Length = 634

 Score =  568 bits (1463), Expect = e-159
 Identities = 282/354 (79%), Positives = 308/354 (87%)
 Frame = -3

Query: 1453 VELFRHLPQYEHGTQLPNLESKFFQLDPMHPAVYKVGLQYLTGDVCGGNARCIAMLQAFK 1274
            VELFRHLPQYE  TQL  LESKFF+LDPMHPAVYKVGLQYL+GDVCGGNARCIAMLQAF+
Sbjct: 281  VELFRHLPQYERRTQLTELESKFFELDPMHPAVYKVGLQYLSGDVCGGNARCIAMLQAFQ 340

Query: 1273 EAITDYSTPPEKALVRDLTAKISSYVSFMNECRPLSISMGNAIRFLKNRIAKLPLNLSEP 1094
            EAI DYSTP EK L RDLTAKI SY+SF+ ECRPLSISMGNAIRFLKNRIAKLPL LSE 
Sbjct: 341  EAIKDYSTPSEKTLARDLTAKIGSYLSFLIECRPLSISMGNAIRFLKNRIAKLPLTLSEA 400

Query: 1093 EAKAILQSDIDRFINEKIVLADKVIVEHAVTKIRDGDVLLTHGASSVVEMILVYAHDIGK 914
            E KA L SDIDRFINEKI+LADKVIV+HAVTKI DGDVLLT+G+ S VEM+L++AH++GK
Sbjct: 401  EVKATLHSDIDRFINEKIILADKVIVKHAVTKISDGDVLLTYGSPSAVEMVLLHAHELGK 460

Query: 913  QFRVVVVDSRPXXXXXXXXXXXXXXXLSCTYTHINAISYIMHEVTRVFLGASSVLCNGTV 734
            QFRVVVVDSRP               + CTYTH+NAISYIMHEVTRVFLGASSVL NGTV
Sbjct: 461  QFRVVVVDSRPKLEGQLLLHRLVGKGIDCTYTHVNAISYIMHEVTRVFLGASSVLSNGTV 520

Query: 733  YSRVGSACVSMVASAFRVPVLICCEAYKFHERVQLDSICSNELGDPDTISKVPGREDVNH 554
            YSRVG+ACV+MVA AFRVPVL+CCEAYKFHERVQLDS+CSNELGDPD ISKV GRED+N 
Sbjct: 521  YSRVGTACVAMVAHAFRVPVLVCCEAYKFHERVQLDSLCSNELGDPDVISKVRGREDINL 580

Query: 553  LENWSDSETLQLLNLTYDVTPSDYVSMIITDYGMVPPTSVPVIVREYMREPLWM 392
            L+  +DSE LQLLNL YD TPSDY+SMIITDYGMVPPTSVPVIVR+Y RE LW+
Sbjct: 581  LDGSTDSENLQLLNLIYDATPSDYISMIITDYGMVPPTSVPVIVRDYQREHLWI 634



 Score = 90.5 bits (223), Expect = 2e-15
 Identities = 57/128 (44%), Positives = 70/128 (54%), Gaps = 5/128 (3%)
 Frame = -2

Query: 2009 SGSNYPVASFTTVSAVKMA--DKG---LVETKNDRPTSSKPLKEKTSXXXXXXXXXXXXX 1845
            + S+ P +  TTVS V     +KG    VE +ND+ + SK LKEKT+             
Sbjct: 130  AASSVPASGLTTVSVVNNLPIEKGGGVAVEMQNDQSSRSKSLKEKTTKAERRALQEAQRA 189

Query: 1844 XXXXXXXEGGRHTGAIASGGPAHAKTTKVVNNPPQKKDAPPTVVPEKKGSDRPPEKDRKK 1665
                   EGG+ T A ASG  A AK+ K V  P QK D+    V EKKG DRPPEKDRKK
Sbjct: 190  AKAAAKAEGGK-TPAAASGAAASAKSAKSVKPPSQKNDSATVAVSEKKGGDRPPEKDRKK 248

Query: 1664 DIPPPRMQ 1641
            ++P PRMQ
Sbjct: 249  EVPQPRMQ 256


>ref|XP_002521202.1| translation initiation factor 2b, delta subunit, putative [Ricinus
            communis] gi|223539567|gb|EEF41154.1| translation
            initiation factor 2b, delta subunit, putative [Ricinus
            communis]
          Length = 638

 Score =  565 bits (1456), Expect = e-158
 Identities = 281/354 (79%), Positives = 310/354 (87%)
 Frame = -3

Query: 1453 VELFRHLPQYEHGTQLPNLESKFFQLDPMHPAVYKVGLQYLTGDVCGGNARCIAMLQAFK 1274
            VELFRHLPQYEHGTQLP+LESKFFQLDPMHPAVYKVGLQYL+GDVCGGNARCIAMLQAF+
Sbjct: 285  VELFRHLPQYEHGTQLPDLESKFFQLDPMHPAVYKVGLQYLSGDVCGGNARCIAMLQAFQ 344

Query: 1273 EAITDYSTPPEKALVRDLTAKISSYVSFMNECRPLSISMGNAIRFLKNRIAKLPLNLSEP 1094
            E I DYSTPPEK LVRDLTAKI SYVSF+ ECRPLSISMGNAIRFLKNRIAKLPL LSE 
Sbjct: 345  EVINDYSTPPEKTLVRDLTAKIGSYVSFLIECRPLSISMGNAIRFLKNRIAKLPLTLSEA 404

Query: 1093 EAKAILQSDIDRFINEKIVLADKVIVEHAVTKIRDGDVLLTHGASSVVEMILVYAHDIGK 914
            EAKA L +DID FI EKI++ADKVIV+HAVTKIRDGDVLLT+G+SS VEMIL++AH++GK
Sbjct: 405  EAKATLHADIDCFIYEKIIVADKVIVKHAVTKIRDGDVLLTYGSSSAVEMILLHAHELGK 464

Query: 913  QFRVVVVDSRPXXXXXXXXXXXXXXXLSCTYTHINAISYIMHEVTRVFLGASSVLCNGTV 734
            QF+VVVVDSRP               +SCTYTHINA+SYIMHEVT+V LGASSVL NGTV
Sbjct: 465  QFQVVVVDSRPKLEGQLLLRRLLGKGISCTYTHINAVSYIMHEVTQVVLGASSVLSNGTV 524

Query: 733  YSRVGSACVSMVASAFRVPVLICCEAYKFHERVQLDSICSNELGDPDTISKVPGREDVNH 554
            YSRVG+ACV+M+A AF VPVL+CCEAYKFHERVQLDSICSNELGDPD ISKV GR+++N 
Sbjct: 525  YSRVGTACVAMMAHAFHVPVLVCCEAYKFHERVQLDSICSNELGDPDAISKVHGRDEINF 584

Query: 553  LENWSDSETLQLLNLTYDVTPSDYVSMIITDYGMVPPTSVPVIVREYMREPLWM 392
            L   + SE +QLLNL YD TPS+YVSMIITDYGMVPPTSVPVIVREY RE  W+
Sbjct: 585  LGGCATSENMQLLNLIYDATPSEYVSMIITDYGMVPPTSVPVIVREYRREHWWI 638



 Score = 68.2 bits (165), Expect = 1e-08
 Identities = 49/130 (37%), Positives = 59/130 (45%), Gaps = 7/130 (5%)
 Frame = -2

Query: 2009 SGSNYPVASFTTVSAVKMADKGLVE-------TKNDRPTSSKPLKEKTSXXXXXXXXXXX 1851
            + S+ P +  TTVS       GL E        +N   ++ K LKEKT+           
Sbjct: 139  TSSSVPGSGLTTVSVFVNLPPGLDEKAGISTDVQNSNRSNLKRLKEKTTKAERRALQEAQ 198

Query: 1850 XXXXXXXXXEGGRHTGAIASGGPAHAKTTKVVNNPPQKKDAPPTVVPEKKGSDRPPEKDR 1671
                     EG     AI    PA+AK  K    P QK D  PT   EKKG + PPEKDR
Sbjct: 199  QAAKAAAKAEGA----AI----PANAKLAKSAKVPSQKNDNAPTAASEKKGGEHPPEKDR 250

Query: 1670 KKDIPPPRMQ 1641
            KKD+P PRMQ
Sbjct: 251  KKDVPQPRMQ 260


>ref|XP_003554977.1| PREDICTED: translation initiation factor eIF-2B subunit delta-like
            [Glycine max]
          Length = 660

 Score =  565 bits (1455), Expect = e-158
 Identities = 279/354 (78%), Positives = 312/354 (88%)
 Frame = -3

Query: 1453 VELFRHLPQYEHGTQLPNLESKFFQLDPMHPAVYKVGLQYLTGDVCGGNARCIAMLQAFK 1274
            VELFRHLPQYEHG+QLP+LE+KFF L P+HP+VYKVGLQYLTGD+ GGNARCIAMLQAF+
Sbjct: 307  VELFRHLPQYEHGSQLPDLEAKFFHLSPVHPSVYKVGLQYLTGDIAGGNARCIAMLQAFQ 366

Query: 1273 EAITDYSTPPEKALVRDLTAKISSYVSFMNECRPLSISMGNAIRFLKNRIAKLPLNLSEP 1094
            EAI DY  P EK LVRDLTAKISSYVSF+ ECRPLSISMGNAIRFLK+ IAKLPL LSE 
Sbjct: 367  EAIKDYKVPHEKTLVRDLTAKISSYVSFLIECRPLSISMGNAIRFLKSHIAKLPLTLSES 426

Query: 1093 EAKAILQSDIDRFINEKIVLADKVIVEHAVTKIRDGDVLLTHGASSVVEMILVYAHDIGK 914
            EAKA LQSDI+RFI+EKI+LA+KVIV+HAVTKIRDGDVLLT+G+SS VEMIL++AH++GK
Sbjct: 427  EAKASLQSDIERFISEKIILANKVIVKHAVTKIRDGDVLLTYGSSSAVEMILLHAHELGK 486

Query: 913  QFRVVVVDSRPXXXXXXXXXXXXXXXLSCTYTHINAISYIMHEVTRVFLGASSVLCNGTV 734
            QFRVVVVDSRP               LSCTYTHINA+SYIMHEVTRVFLGAS+VL NGTV
Sbjct: 487  QFRVVVVDSRPKLRGQLLLRRLVEKGLSCTYTHINAVSYIMHEVTRVFLGASAVLSNGTV 546

Query: 733  YSRVGSACVSMVASAFRVPVLICCEAYKFHERVQLDSICSNELGDPDTISKVPGREDVNH 554
            YSRVG+ACV+MVA AFRVPV++CCEAYKFHERVQLDSICSNELG+PD IS V GREDV H
Sbjct: 547  YSRVGTACVAMVAHAFRVPVIVCCEAYKFHERVQLDSICSNELGNPDVISNVLGREDVKH 606

Query: 553  LENWSDSETLQLLNLTYDVTPSDYVSMIITDYGMVPPTSVPVIVREYMREPLWM 392
            L+ W++ E LQLLNL YD TPSDYVSMI+TDYGMVPPTSVPVIVREY RE +W+
Sbjct: 607  LDGWANIENLQLLNLVYDATPSDYVSMIVTDYGMVPPTSVPVIVREYGREQVWI 660



 Score = 62.0 bits (149), Expect = 7e-07
 Identities = 48/130 (36%), Positives = 57/130 (43%), Gaps = 12/130 (9%)
 Frame = -2

Query: 1994 PVASFTTVSAVKMA------DKG------LVETKNDRPTSSKPLKEKTSXXXXXXXXXXX 1851
            P +  TTVS V  +      +KG       VE K D+P SSK  K K S           
Sbjct: 158  PASELTTVSVVNDSLGIPEKEKGNKAGGSAVEVK-DQPNSSKQQKPKLSKAERRALQESQ 216

Query: 1850 XXXXXXXXXEGGRHTGAIASGGPAHAKTTKVVNNPPQKKDAPPTVVPEKKGSDRPPEKDR 1671
                     EG + +G +A+     AK  K    P QK D       EKKG + PPEKDR
Sbjct: 217  RAAKAAAKGEGSKASGTVATMNAKPAKAVK----PAQKVDNAAVAASEKKGGEIPPEKDR 272

Query: 1670 KKDIPPPRMQ 1641
            KKD P PRMQ
Sbjct: 273  KKDAPQPRMQ 282


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