BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012896
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001784798.1| predicted protein [Physcomitrella patens sub...    67   2e-09
ref|XP_002972199.1| hypothetical protein SELMODRAFT_96367 [Selag...    66   3e-09
ref|NP_568900.1| transcription elongation factor B, polypeptide ...    65   4e-09
ref|XP_004145280.1| PREDICTED: transcription elongation factor B...    63   2e-08
emb|CBI16050.3| unnamed protein product [Vitis vinifera]               63   2e-08

>ref|XP_001784798.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162663632|gb|EDQ50386.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 99

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 29/32 (90%), Positives = 32/32 (100%)
 Frame = +1

Query: 1   WSLQFTSGKETEFHIEPELTLELMMAANYLHT 96
           WSLQF+SGKETEFHIEPE+TL+LMMAANYLHT
Sbjct: 68  WSLQFSSGKETEFHIEPEITLDLMMAANYLHT 99


>ref|XP_002972199.1| hypothetical protein SELMODRAFT_96367 [Selaginella moellendorffii]
           gi|302791489|ref|XP_002977511.1| hypothetical protein
           SELMODRAFT_106838 [Selaginella moellendorffii]
           gi|300154881|gb|EFJ21515.1| hypothetical protein
           SELMODRAFT_106838 [Selaginella moellendorffii]
           gi|300160498|gb|EFJ27116.1| hypothetical protein
           SELMODRAFT_96367 [Selaginella moellendorffii]
          Length = 99

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = +1

Query: 1   WSLQFTSGKETEFHIEPELTLELMMAANYLHT 96
           WSLQF SGKETEFHIEPE+TLEL+MAANYLHT
Sbjct: 68  WSLQFASGKETEFHIEPEMTLELLMAANYLHT 99


>ref|NP_568900.1| transcription elongation factor B, polypeptide 1 [Arabidopsis
           thaliana] gi|297790272|ref|XP_002863037.1| SKP1 family
           protein [Arabidopsis lyrata subsp. lyrata]
           gi|297793455|ref|XP_002864612.1| SKP1 family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|9759236|dbj|BAB09760.1| unnamed protein product
           [Arabidopsis thaliana] gi|15028385|gb|AAK76669.1|
           putative elongin protein [Arabidopsis thaliana]
           gi|20465563|gb|AAM20264.1| unknown protein [Arabidopsis
           thaliana] gi|297308839|gb|EFH39296.1| SKP1 family
           protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310447|gb|EFH40871.1| SKP1 family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|332009765|gb|AED97148.1| transcription elongation
           factor B, polypeptide 1 [Arabidopsis thaliana]
          Length = 96

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 29/32 (90%), Positives = 31/32 (96%)
 Frame = +1

Query: 1   WSLQFTSGKETEFHIEPELTLELMMAANYLHT 96
           WSLQ++ GKETEFHIEPELTLELMMAANYLHT
Sbjct: 65  WSLQYSRGKETEFHIEPELTLELMMAANYLHT 96


>ref|XP_004145280.1| PREDICTED: transcription elongation factor B polypeptide 1-like
           [Cucumis sativus] gi|449474021|ref|XP_004154051.1|
           PREDICTED: transcription elongation factor B polypeptide
           1-like [Cucumis sativus]
           gi|449508510|ref|XP_004163332.1| PREDICTED:
           transcription elongation factor B polypeptide 1-like
           [Cucumis sativus]
          Length = 98

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/32 (90%), Positives = 30/32 (93%)
 Frame = +1

Query: 1   WSLQFTSGKETEFHIEPELTLELMMAANYLHT 96
           W+LQF SGKETEF IEPELTLELMMAANYLHT
Sbjct: 67  WNLQFASGKETEFPIEPELTLELMMAANYLHT 98


>emb|CBI16050.3| unnamed protein product [Vitis vinifera]
          Length = 74

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/32 (90%), Positives = 30/32 (93%)
 Frame = +1

Query: 1   WSLQFTSGKETEFHIEPELTLELMMAANYLHT 96
           WSLQF SGK+TEF IEPELTLELMMAANYLHT
Sbjct: 43  WSLQFASGKDTEFPIEPELTLELMMAANYLHT 74