BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012890
         (1268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274201.1| PREDICTED: protein SMG9 [Vitis vinifera] gi|...   435   e-119
ref|XP_002328983.1| predicted protein [Populus trichocarpa] gi|2...   405   e-110
ref|XP_004147641.1| PREDICTED: protein SMG9-like [Cucumis sativus]    404   e-110
ref|XP_004160636.1| PREDICTED: LOW QUALITY PROTEIN: protein SMG9...   403   e-110
ref|XP_002520025.1| conserved hypothetical protein [Ricinus comm...   399   e-109

>ref|XP_002274201.1| PREDICTED: protein SMG9 [Vitis vinifera] gi|297737327|emb|CBI26528.3|
            unnamed protein product [Vitis vinifera]
          Length = 419

 Score =  435 bits (1119), Expect = e-119
 Identities = 215/338 (63%), Positives = 267/338 (78%)
 Frame = +3

Query: 117  HIDKILPYLTENSDFKVIGVIGTPGSGKSTIMNQLYGFHDAASSSAGMLPPFATQSEETK 296
            H D+ LP+LT+N+DF V+GVIG PG GKSTIMN+LYGF     SS GMLPPFA QSE+ +
Sbjct: 78   HTDRFLPFLTDNTDFTVVGVIGPPGVGKSTIMNELYGFD---GSSPGMLPPFAIQSEDIR 134

Query: 297  TVARHCTAGIELRISTERLILLDTQPVFSPSVLAEMMRPDGSSTISLLNGEVLPADLAHE 476
             +ARHCT GIE RIS ERLILLDTQPVFSPSVLAEMMRPDGSSTIS+L GE L ++LAHE
Sbjct: 135  AMARHCTVGIEPRISAERLILLDTQPVFSPSVLAEMMRPDGSSTISVLGGESLSSELAHE 194

Query: 477  LIGIQLGVFLASVCHVLLVVTEGVYDTDMWHLMLTADLLKHGIPDPSSLTPSHSQGTNLG 656
            L+GIQLGV LAS+CH+LLV+++GV+D +MW LMLT DLLKHGIPD SSLTPSHSQ +NLG
Sbjct: 195  LMGIQLGVLLASICHILLVISDGVHDINMWRLMLTVDLLKHGIPDLSSLTPSHSQNSNLG 254

Query: 657  TEKELNDVLRRNGEDYLASPVFVHTKLQDQETAPHKILQLRKTLAQYFCLSSFMGLNHGS 836
            ++KE  D +   GE+YLA+P+FVHTKL+DQ+  P   + LRK LAQ+F  S+F+    G+
Sbjct: 255  SDKEGKDKVLEGGEEYLAAPIFVHTKLRDQDITPRNFVHLRKALAQFFSSSTFVKEKCGN 314

Query: 837  IPKEQIFSVKTHNINTEDLDSREVNLVLLPYRNQDEPQAAQYESFDTMLGKLRDQVLSMN 1016
              KE + S    N+ + DLDS   NL L+P +++ +   AQYES+ +ML KLRDQVLSMN
Sbjct: 315  TTKEHLVSSVPPNMPSTDLDSTLPNLFLVPCKSKVDSPRAQYESYTSMLWKLRDQVLSMN 374

Query: 1017 CHSFAKSVSEREWLRNSTRIWESVKNSPVFSEYIRTLQ 1130
            C SFA+++SER+WLRNS +IWE VKNSP+ +EY +TLQ
Sbjct: 375  CPSFARTISERDWLRNSAKIWELVKNSPIIAEYCKTLQ 412


>ref|XP_002328983.1| predicted protein [Populus trichocarpa] gi|222839217|gb|EEE77568.1|
            predicted protein [Populus trichocarpa]
          Length = 408

 Score =  405 bits (1040), Expect = e-110
 Identities = 206/338 (60%), Positives = 258/338 (76%)
 Frame = +3

Query: 117  HIDKILPYLTENSDFKVIGVIGTPGSGKSTIMNQLYGFHDAASSSAGMLPPFATQSEETK 296
            HID+ LP+LTEN+DF V+G+IG PG GKSTI+N+LYGF     +S GMLPPF  QSE+ +
Sbjct: 68   HIDRFLPFLTENTDFTVVGIIGPPGVGKSTILNELYGFD---GTSPGMLPPFTVQSEDNR 124

Query: 297  TVARHCTAGIELRISTERLILLDTQPVFSPSVLAEMMRPDGSSTISLLNGEVLPADLAHE 476
             +ARHC+ GIE RIS ERLILLDTQPVFSPSVLAEMMRPDGSSTIS+L+GE L  +LAHE
Sbjct: 125  AMARHCSVGIEPRISAERLILLDTQPVFSPSVLAEMMRPDGSSTISVLSGENLSTELAHE 184

Query: 477  LIGIQLGVFLASVCHVLLVVTEGVYDTDMWHLMLTADLLKHGIPDPSSLTPSHSQGTNLG 656
            L  IQLGV LAS+CHVLLVV++GVYD  M HLMLT DLLKHGIPDPSSL  ++ Q +N G
Sbjct: 185  LTAIQLGVLLASICHVLLVVSDGVYDDSMRHLMLTVDLLKHGIPDPSSLNSAYLQSSNAG 244

Query: 657  TEKELNDVLRRNGEDYLASPVFVHTKLQDQETAPHKILQLRKTLAQYFCLSSFMGLNHGS 836
            TEKE  D +    E+Y+A+P+FVHTKLQD++  P   ++LRK LAQYF  SSF+    GS
Sbjct: 245  TEKENKDKV-SEAEEYMATPLFVHTKLQDKDFTPCNFVELRKELAQYFSSSSFIKEKGGS 303

Query: 837  IPKEQIFSVKTHNINTEDLDSREVNLVLLPYRNQDEPQAAQYESFDTMLGKLRDQVLSMN 1016
            + KEQI      N +  D DS+ +NL ++P +++D+   AQY+S+ + L KLRDQVLSMN
Sbjct: 304  MEKEQISYSVPSNSHDNDPDSKSINLFVIPLKDKDDSLKAQYKSYISALWKLRDQVLSMN 363

Query: 1017 CHSFAKSVSEREWLRNSTRIWESVKNSPVFSEYIRTLQ 1130
              SFA++VSER+WL+NS +IWE VK S + +EY + LQ
Sbjct: 364  GLSFARTVSERDWLKNSAKIWELVKGSAIIAEYGQALQ 401


>ref|XP_004147641.1| PREDICTED: protein SMG9-like [Cucumis sativus]
          Length = 412

 Score =  404 bits (1037), Expect = e-110
 Identities = 196/338 (57%), Positives = 257/338 (76%)
 Frame = +3

Query: 117  HIDKILPYLTENSDFKVIGVIGTPGSGKSTIMNQLYGFHDAASSSAGMLPPFATQSEETK 296
            HID+ LP+LTEN++FKV+G+IG PG GKSTIMN++YG+     SS GMLPPF   SE+ +
Sbjct: 72   HIDRFLPFLTENTEFKVVGIIGPPGVGKSTIMNEIYGYD---GSSPGMLPPFPILSEDVR 128

Query: 297  TVARHCTAGIELRISTERLILLDTQPVFSPSVLAEMMRPDGSSTISLLNGEVLPADLAHE 476
             +ARHCT GIE RIS+ER+ILLDTQPVFSPSVLAE+MRPDGSST+S++NGE   A+LAHE
Sbjct: 129  AMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTVSVINGESPSAELAHE 188

Query: 477  LIGIQLGVFLASVCHVLLVVTEGVYDTDMWHLMLTADLLKHGIPDPSSLTPSHSQGTNLG 656
            L+ IQLG+ LAS+C+++LV++EGV+D +MWHLMLT DLLKHG+PDPSS   SH+Q +N+ 
Sbjct: 189  LMSIQLGILLASICNIVLVISEGVHDLNMWHLMLTVDLLKHGLPDPSSPISSHAQNSNVA 248

Query: 657  TEKELNDVLRRNGEDYLASPVFVHTKLQDQETAPHKILQLRKTLAQYFCLSSFMGLNHGS 836
            +EKE  +      E+Y+A+P+FVH K+QD++  P  ILQL++  A YF  SSFMG     
Sbjct: 249  SEKEYKE-KTSTSEEYMATPIFVHAKVQDRDLVPQNILQLKRAFAYYFKTSSFMGDKFEK 307

Query: 837  IPKEQIFSVKTHNINTEDLDSREVNLVLLPYRNQDEPQAAQYESFDTMLGKLRDQVLSMN 1016
            +  EQ+ S    +    D+D  +  L+L+P RN+D+    QYESF+  L KLRDQVLSMN
Sbjct: 308  VHSEQLLSSVVPDTRNLDVDGEDRRLLLIPNRNKDDSTRGQYESFNLALWKLRDQVLSMN 367

Query: 1017 CHSFAKSVSEREWLRNSTRIWESVKNSPVFSEYIRTLQ 1130
              SF ++VSER+WL+NS +IWESVK+SP+  EY RTLQ
Sbjct: 368  GASFPRTVSERDWLKNSVKIWESVKSSPIVMEYARTLQ 405


>ref|XP_004160636.1| PREDICTED: LOW QUALITY PROTEIN: protein SMG9-like [Cucumis sativus]
          Length = 411

 Score =  403 bits (1036), Expect = e-110
 Identities = 196/338 (57%), Positives = 256/338 (75%)
 Frame = +3

Query: 117  HIDKILPYLTENSDFKVIGVIGTPGSGKSTIMNQLYGFHDAASSSAGMLPPFATQSEETK 296
            HID+ LP+LTEN++FKV+G+IG PG GKSTIMN++YG+     SS GMLPPF   SE+ +
Sbjct: 72   HIDRFLPFLTENTEFKVVGIIGPPGVGKSTIMNEIYGYD---GSSPGMLPPFPILSEDVR 128

Query: 297  TVARHCTAGIELRISTERLILLDTQPVFSPSVLAEMMRPDGSSTISLLNGEVLPADLAHE 476
             +ARHCT GIE RIS+ER+ILLDTQPVFSPSVLAE+MRPDGSST+S++NGE   A+LAHE
Sbjct: 129  AMARHCTLGIEPRISSERIILLDTQPVFSPSVLAEIMRPDGSSTVSVINGESPSAELAHE 188

Query: 477  LIGIQLGVFLASVCHVLLVVTEGVYDTDMWHLMLTADLLKHGIPDPSSLTPSHSQGTNLG 656
            L+ IQLG+ LAS+C+++LV++EGV+D +MWHLMLT DLLKHG+PDPSS   SH+Q +N+ 
Sbjct: 189  LMSIQLGILLASICNIVLVISEGVHDLNMWHLMLTVDLLKHGLPDPSSPISSHAQNSNVA 248

Query: 657  TEKELNDVLRRNGEDYLASPVFVHTKLQDQETAPHKILQLRKTLAQYFCLSSFMGLNHGS 836
            +EKE         E+Y+A+P+FVH K+QD++  P  ILQL++  A YF  SSFMG     
Sbjct: 249  SEKEYKKT--STSEEYMATPIFVHAKVQDRDLVPQNILQLKRAFAYYFKTSSFMGDKFEK 306

Query: 837  IPKEQIFSVKTHNINTEDLDSREVNLVLLPYRNQDEPQAAQYESFDTMLGKLRDQVLSMN 1016
            +  EQ+ S    +    D+D  +  L+L+P RN+D+    QYESF+  L KLRDQVLSMN
Sbjct: 307  VHSEQLLSSVVPDTRNLDVDGEDRRLLLIPNRNKDDSTRGQYESFNLALWKLRDQVLSMN 366

Query: 1017 CHSFAKSVSEREWLRNSTRIWESVKNSPVFSEYIRTLQ 1130
              SF ++VSER+WL+NS +IWESVK+SP+  EY RTLQ
Sbjct: 367  GASFPRTVSERDWLKNSVKIWESVKSSPIVMEYARTLQ 404


>ref|XP_002520025.1| conserved hypothetical protein [Ricinus communis]
            gi|223540789|gb|EEF42349.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 380

 Score =  399 bits (1026), Expect = e-109
 Identities = 201/331 (60%), Positives = 254/331 (76%)
 Frame = +3

Query: 138  YLTENSDFKVIGVIGTPGSGKSTIMNQLYGFHDAASSSAGMLPPFATQSEETKTVARHCT 317
            +LTEN+DF V+GVIG PG GKSTIMN+LYGF    ++S GMLPPF TQSE+ + +ARH +
Sbjct: 5    FLTENTDFTVVGVIGPPGVGKSTIMNELYGFD---ATSPGMLPPFTTQSEDNRAMARHSS 61

Query: 318  AGIELRISTERLILLDTQPVFSPSVLAEMMRPDGSSTISLLNGEVLPADLAHELIGIQLG 497
             GIE R+S +RLILLDTQPVFS S+LAEMMRPDGSSTIS+L+GE L A+LAHEL+GIQLG
Sbjct: 62   VGIEPRVSADRLILLDTQPVFSSSILAEMMRPDGSSTISVLSGENLSAELAHELMGIQLG 121

Query: 498  VFLASVCHVLLVVTEGVYDTDMWHLMLTADLLKHGIPDPSSLTPSHSQGTNLGTEKELND 677
            V LAS+CH++LVV++GV+D  MW LMLT DLLKHGIPDPSSLT SH   +N+G EKE  D
Sbjct: 122  VLLASICHIVLVVSDGVHDDCMWQLMLTVDLLKHGIPDPSSLTSSHLHSSNVGPEKENKD 181

Query: 678  VLRRNGEDYLASPVFVHTKLQDQETAPHKILQLRKTLAQYFCLSSFMGLNHGSIPKEQIF 857
                + E+Y+A+P FVHTK Q Q   P  ++QLRK LAQYF  SSFM    G++ KE + 
Sbjct: 182  -KSFDSEEYMATPAFVHTKFQGQNFTPLNLMQLRKALAQYFSSSSFMREKCGNLGKENLI 240

Query: 858  SVKTHNINTEDLDSREVNLVLLPYRNQDEPQAAQYESFDTMLGKLRDQVLSMNCHSFAKS 1037
            S       + DL S  ++L+L+P +N+D+   AQ+ES+ + L KLRD+VLSMNC SFA++
Sbjct: 241  SSTVSTTKSNDLHSTPLSLILIPSKNKDDMPRAQHESYISALWKLRDEVLSMNCPSFART 300

Query: 1038 VSEREWLRNSTRIWESVKNSPVFSEYIRTLQ 1130
            VSER+WL+NS +IWE VKNS + +EY RTLQ
Sbjct: 301  VSERDWLKNSAKIWELVKNSSIIAEYSRTLQ 331