BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012889
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274201.1| PREDICTED: protein SMG9 [Vitis vinifera] gi|...    60   1e-07
ref|XP_002328983.1| predicted protein [Populus trichocarpa] gi|2...    57   1e-06

>ref|XP_002274201.1| PREDICTED: protein SMG9 [Vitis vinifera]
           gi|297737327|emb|CBI26528.3| unnamed protein product
           [Vitis vinifera]
          Length = 419

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/69 (42%), Positives = 46/69 (66%)
 Frame = +3

Query: 255 RLQDQETAPHKKIQLRKTIAQYFSSTSFMGLNHGSVSKEHISSVKTPNINTEDLDSREVN 434
           +L+DQ+  P   + LRK +AQ+FSS++F+    G+ +KEH+ S   PN+ + DLDS   N
Sbjct: 280 KLRDQDITPRNFVHLRKALAQFFSSSTFVKEKCGNTTKEHLVSSVPPNMPSTDLDSTLPN 339

Query: 435 LVLLPQESR 461
           L L+P +S+
Sbjct: 340 LFLVPCKSK 348


>ref|XP_002328983.1| predicted protein [Populus trichocarpa] gi|222839217|gb|EEE77568.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/69 (40%), Positives = 44/69 (63%)
 Frame = +3

Query: 255 RLQDQETAPHKKIQLRKTIAQYFSSTSFMGLNHGSVSKEHISSVKTPNINTEDLDSREVN 434
           +LQD++  P   ++LRK +AQYFSS+SF+    GS+ KE IS     N +  D DS+ +N
Sbjct: 269 KLQDKDFTPCNFVELRKELAQYFSSSSFIKEKGGSMEKEQISYSVPSNSHDNDPDSKSIN 328

Query: 435 LVLLPQESR 461
           L ++P + +
Sbjct: 329 LFVIPLKDK 337