BLASTX nr result

ID: Coptis24_contig00012870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012870
         (1279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36259.3| unnamed protein product [Vitis vinifera]              446   e-123
ref|XP_002324285.1| predicted protein [Populus trichocarpa] gi|2...   439   e-121
ref|XP_002285335.1| PREDICTED: acyl-protein thioesterase 2 [Viti...   439   e-121
ref|XP_002308652.1| predicted protein [Populus trichocarpa] gi|2...   436   e-120
ref|XP_002285009.1| PREDICTED: acyl-protein thioesterase 2 isofo...   429   e-117

>emb|CBI36259.3| unnamed protein product [Vitis vinifera]
          Length = 292

 Score =  446 bits (1148), Expect = e-123
 Identities = 207/272 (76%), Positives = 237/272 (87%), Gaps = 1/272 (0%)
 Frame = -2

Query: 1101 IAIGGCVSSVLKPFKMSFNSPTMGSGSRNSGRA-EFGRTHVVRPKGKHQATIVWLHGLGD 925
            I IGG  +++ +   MS+++ +MGSGSR + R  EFGRTHVVRPKGKHQATIVWLHGLGD
Sbjct: 21   ITIGGLFTALARSVTMSYSNHSMGSGSRTARRTFEFGRTHVVRPKGKHQATIVWLHGLGD 80

Query: 924  NGSSWSQLLESLPLPNIKWICPTAPTRPVAVFGGFPCTAWFDVGDLSEEGPDDVDGLDVS 745
            NGSSWSQLLE+LPLPNIKWICPTAPTRPVAV GGFPCTAWFDVG+LS++GPDD+DGLD S
Sbjct: 81   NGSSWSQLLENLPLPNIKWICPTAPTRPVAVLGGFPCTAWFDVGELSDDGPDDLDGLDAS 140

Query: 744  AAHVANLLSTEPADIKLGIGGFSMGAATALYSATCFTQGKYGNGNRYPVNLSVVVGLSGW 565
            AAH+ANLLSTEPAD+KLG+GGFSMGAATALYSATC+ Q KYGN + YPVNL  VVGLSGW
Sbjct: 141  AAHIANLLSTEPADVKLGVGGFSMGAATALYSATCYAQAKYGNNSPYPVNLKAVVGLSGW 200

Query: 564  LPCSRSLRNKIEGSHEATRRATSFPLLLCHGRGDDVVQYTHGEKSAQVLSATGFRNLTFR 385
            LP SRSLRNKIEGSHEA RRA S P++LCHG  DDVV Y +GE+SA  LS+ GFR LTF+
Sbjct: 201  LPGSRSLRNKIEGSHEAARRAASLPIMLCHGMNDDVVAYNYGERSAHCLSSAGFRYLTFK 260

Query: 384  TYNGLGHYTIPQEMDEVCTWLNSRMGLEGWHS 289
             Y+GLGHYT+P+EMDEVCTWL +R+GLEG HS
Sbjct: 261  AYDGLGHYTVPKEMDEVCTWLTARLGLEGCHS 292


>ref|XP_002324285.1| predicted protein [Populus trichocarpa] gi|222865719|gb|EEF02850.1|
            predicted protein [Populus trichocarpa]
          Length = 257

 Score =  439 bits (1129), Expect = e-121
 Identities = 202/254 (79%), Positives = 229/254 (90%), Gaps = 1/254 (0%)
 Frame = -2

Query: 1056 MSFNSPTMGSGSRNSGRA-EFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLP 880
            MS+N+  +GSGSRN+ R  EFGRTHVVRPKGKHQATIVWLHGLGD GSSWSQLLE+LPLP
Sbjct: 1    MSYNTSAVGSGSRNTTRTFEFGRTHVVRPKGKHQATIVWLHGLGDKGSSWSQLLETLPLP 60

Query: 879  NIKWICPTAPTRPVAVFGGFPCTAWFDVGDLSEEGPDDVDGLDVSAAHVANLLSTEPADI 700
            NIKWICPTAPTRPVA+FGGFPCTAWFDVGD+SE+ PDD++GL+ SA HVANLLSTEPADI
Sbjct: 61   NIKWICPTAPTRPVAIFGGFPCTAWFDVGDISEDAPDDLEGLEASATHVANLLSTEPADI 120

Query: 699  KLGIGGFSMGAATALYSATCFTQGKYGNGNRYPVNLSVVVGLSGWLPCSRSLRNKIEGSH 520
            KLG+GGFSMGAATALYSATC   G+YGNGN+YP+NL+ VVGLSGWLPCSR+LR++IE S 
Sbjct: 121  KLGVGGFSMGAATALYSATCHVLGQYGNGNQYPINLTAVVGLSGWLPCSRTLRSRIERSD 180

Query: 519  EATRRATSFPLLLCHGRGDDVVQYTHGEKSAQVLSATGFRNLTFRTYNGLGHYTIPQEMD 340
            EA RRA S P+LLCHG GDDVV + HGEKSAQ LS+ GFRNLTFR+YNGLGHYTIP+EMD
Sbjct: 181  EAARRAASLPILLCHGSGDDVVAHKHGEKSAQALSSAGFRNLTFRSYNGLGHYTIPEEMD 240

Query: 339  EVCTWLNSRMGLEG 298
            EVC WL +R+GL+G
Sbjct: 241  EVCHWLTTRLGLDG 254


>ref|XP_002285335.1| PREDICTED: acyl-protein thioesterase 2 [Vitis vinifera]
          Length = 257

 Score =  439 bits (1129), Expect = e-121
 Identities = 203/257 (78%), Positives = 229/257 (89%), Gaps = 1/257 (0%)
 Frame = -2

Query: 1056 MSFNSPTMGSGSRNSGRA-EFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLP 880
            MS+++ +MGSGSR + R  EFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLE+LPLP
Sbjct: 1    MSYSNHSMGSGSRTARRTFEFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLENLPLP 60

Query: 879  NIKWICPTAPTRPVAVFGGFPCTAWFDVGDLSEEGPDDVDGLDVSAAHVANLLSTEPADI 700
            NIKWICPTAPTRPVAV GGFPCTAWFDVG+LS++GPDD+DGLD SAAH+ANLLSTEPAD+
Sbjct: 61   NIKWICPTAPTRPVAVLGGFPCTAWFDVGELSDDGPDDLDGLDASAAHIANLLSTEPADV 120

Query: 699  KLGIGGFSMGAATALYSATCFTQGKYGNGNRYPVNLSVVVGLSGWLPCSRSLRNKIEGSH 520
            KLG+GGFSMGAATALYSATC+ Q KYGN + YPVNL  VVGLSGWLP SRSLRNKIEGSH
Sbjct: 121  KLGVGGFSMGAATALYSATCYAQAKYGNNSPYPVNLKAVVGLSGWLPGSRSLRNKIEGSH 180

Query: 519  EATRRATSFPLLLCHGRGDDVVQYTHGEKSAQVLSATGFRNLTFRTYNGLGHYTIPQEMD 340
            EA RRA S P++LCHG  DDVV Y +GE+SA  LS+ GFR LTF+ Y+GLGHYT+P+EMD
Sbjct: 181  EAARRAASLPIMLCHGMNDDVVAYNYGERSAHCLSSAGFRYLTFKAYDGLGHYTVPKEMD 240

Query: 339  EVCTWLNSRMGLEGWHS 289
            EVCTWL +R+GLEG HS
Sbjct: 241  EVCTWLTARLGLEGCHS 257


>ref|XP_002308652.1| predicted protein [Populus trichocarpa] gi|222854628|gb|EEE92175.1|
            predicted protein [Populus trichocarpa]
          Length = 257

 Score =  436 bits (1120), Expect = e-120
 Identities = 203/254 (79%), Positives = 225/254 (88%), Gaps = 1/254 (0%)
 Frame = -2

Query: 1056 MSFNSPTMGSGSRNSGRA-EFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLP 880
            MS+N+   GSGSRN+ R  EFGRTHVVRPKGKHQATIVWLHGLGD GSSWSQLLE+LPLP
Sbjct: 1    MSYNTSAAGSGSRNTTRTFEFGRTHVVRPKGKHQATIVWLHGLGDKGSSWSQLLETLPLP 60

Query: 879  NIKWICPTAPTRPVAVFGGFPCTAWFDVGDLSEEGPDDVDGLDVSAAHVANLLSTEPADI 700
            NIKWICPTAPTRPVA+FGGFPCTAW D GD+SE+ PDD++GLD SAAHVANLLSTEPADI
Sbjct: 61   NIKWICPTAPTRPVAIFGGFPCTAWSDAGDISEDAPDDLEGLDASAAHVANLLSTEPADI 120

Query: 699  KLGIGGFSMGAATALYSATCFTQGKYGNGNRYPVNLSVVVGLSGWLPCSRSLRNKIEGSH 520
            KLG+GGFSMGAATALYSATC   G+YGNGN YPVNLS +VGLSGWLPCSR+LRN++E S 
Sbjct: 121  KLGVGGFSMGAATALYSATCHIFGQYGNGNLYPVNLSAIVGLSGWLPCSRTLRNRMERSD 180

Query: 519  EATRRATSFPLLLCHGRGDDVVQYTHGEKSAQVLSATGFRNLTFRTYNGLGHYTIPQEMD 340
            EA RRA S P+LLCHG GDDVV + HGEKSAQ LS+ GFRNLTFR+YNGLGHYTIP+EMD
Sbjct: 181  EAARRAASLPILLCHGSGDDVVAHKHGEKSAQALSSAGFRNLTFRSYNGLGHYTIPEEMD 240

Query: 339  EVCTWLNSRMGLEG 298
             VC WL +R+GLEG
Sbjct: 241  GVCNWLTTRIGLEG 254


>ref|XP_002285009.1| PREDICTED: acyl-protein thioesterase 2 isoform 1 [Vitis vinifera]
            gi|296082006|emb|CBI21011.3| unnamed protein product
            [Vitis vinifera]
          Length = 257

 Score =  429 bits (1102), Expect = e-117
 Identities = 201/257 (78%), Positives = 224/257 (87%), Gaps = 1/257 (0%)
 Frame = -2

Query: 1056 MSFNSPTMGSGSRNSGRA-EFGRTHVVRPKGKHQATIVWLHGLGDNGSSWSQLLESLPLP 880
            MSFNS TMGSGSR + R  EFGRTHVVRPKGKHQATIVWLHGLGD GSSWSQ+LE+LPLP
Sbjct: 1    MSFNSSTMGSGSRTTRRTFEFGRTHVVRPKGKHQATIVWLHGLGDKGSSWSQILETLPLP 60

Query: 879  NIKWICPTAPTRPVAVFGGFPCTAWFDVGDLSEEGPDDVDGLDVSAAHVANLLSTEPADI 700
            NIKWICPTAPTRPVA+ GGFPCTAWFDVG++SE+ PDD++GLD SAAHVANLLSTEPA+I
Sbjct: 61   NIKWICPTAPTRPVALLGGFPCTAWFDVGEISEDAPDDLEGLDASAAHVANLLSTEPANI 120

Query: 699  KLGIGGFSMGAATALYSATCFTQGKYGNGNRYPVNLSVVVGLSGWLPCSRSLRNKIEGSH 520
            KLG+GGFSMGAA A+YSATC   G+YGNGN Y V LS +VGLSGWLPCSR+L N++E SH
Sbjct: 121  KLGVGGFSMGAAVAVYSATCRVLGQYGNGNPYQVTLSAIVGLSGWLPCSRTLMNQMERSH 180

Query: 519  EATRRATSFPLLLCHGRGDDVVQYTHGEKSAQVLSATGFRNLTFRTYNGLGHYTIPQEMD 340
            EA RRA + P+LLCHG GDDVV Y HGEKSAQ LSA GFRNLTFRTYNGLGHYTIP+E D
Sbjct: 181  EAARRAATLPILLCHGIGDDVVAYKHGEKSAQTLSAAGFRNLTFRTYNGLGHYTIPEETD 240

Query: 339  EVCTWLNSRMGLEGWHS 289
            EVC WL +R+ L+G  S
Sbjct: 241  EVCNWLTARLMLDGSRS 257


Top