BLASTX nr result
ID: Coptis24_contig00012855
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00012855
(2607 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277930.1| PREDICTED: putative DNA-binding protein ESCA... 268 5e-69
emb|CBI31637.3| unnamed protein product [Vitis vinifera] 268 5e-69
emb|CAN75757.1| hypothetical protein VITISV_028561 [Vitis vinifera] 268 7e-69
ref|XP_003538420.1| PREDICTED: putative DNA-binding protein ESCA... 229 3e-57
gb|ADY38789.1| DNA-binding protein [Coffea arabica] 228 8e-57
>ref|XP_002277930.1| PREDICTED: putative DNA-binding protein ESCAROLA-like [Vitis
vinifera]
Length = 327
Score = 268 bits (685), Expect = 5e-69
Identities = 137/201 (68%), Positives = 154/201 (76%)
Frame = -2
Query: 941 GSKNKPKPPIIITRESPNALRSHVLEISSGNDIAESIATFARRRQQGVSILSGNGVVTNV 762
GSKNKPKPPI+IT+ESPNALRSHVLEISSG+DIAESIA FA+RR +GVS+LS +G+V NV
Sbjct: 118 GSKNKPKPPIVITKESPNALRSHVLEISSGSDIAESIANFAQRRHRGVSVLSASGIVNNV 177
Query: 761 TLRQPASPGAVVTLHGRFEILSLSGAFLPAPSPPSATGLTVYXXXXXXXXXXXXXXXXXX 582
TLRQPA+PG V+TL GRFEILSLSGAFLPAPSPP ATGLTVY
Sbjct: 178 TLRQPAAPGGVITLQGRFEILSLSGAFLPAPSPPGATGLTVYLAGGQGQVVGGSVVGALM 237
Query: 581 XXXXVMVIAATFTNATYERLPVXXXXXXXXXXXXXXXGVNSGTIGVSAPQSHGLADPSSM 402
V+VIAATF+NAT+ERLP+ GVNSGT G SAPQSHGL DPSSM
Sbjct: 238 ASGPVIVIAATFSNATFERLPLEDEPANEGIQMPQTSGVNSGTGGTSAPQSHGLVDPSSM 297
Query: 401 PMYSLPPNLLPNGQMPHDVYW 339
P+Y+LPPNLLPNGQMPHDV+W
Sbjct: 298 PIYNLPPNLLPNGQMPHDVFW 318
Score = 72.8 bits (177), Expect = 4e-10
Identities = 33/49 (67%), Positives = 38/49 (77%)
Frame = -1
Query: 1341 MANRWWTGNVGMGGGDPVSSSPSLHLRNPDDEHGSLGRLGPRREQELMD 1195
M +RWW GNV M DP+SS+PSLHLRN +D+ G L RLGPRREQE MD
Sbjct: 1 MTHRWWAGNVAMR--DPMSSAPSLHLRNTEDDQGGLNRLGPRREQEFMD 47
>emb|CBI31637.3| unnamed protein product [Vitis vinifera]
Length = 300
Score = 268 bits (685), Expect = 5e-69
Identities = 137/201 (68%), Positives = 154/201 (76%)
Frame = -2
Query: 941 GSKNKPKPPIIITRESPNALRSHVLEISSGNDIAESIATFARRRQQGVSILSGNGVVTNV 762
GSKNKPKPPI+IT+ESPNALRSHVLEISSG+DIAESIA FA+RR +GVS+LS +G+V NV
Sbjct: 91 GSKNKPKPPIVITKESPNALRSHVLEISSGSDIAESIANFAQRRHRGVSVLSASGIVNNV 150
Query: 761 TLRQPASPGAVVTLHGRFEILSLSGAFLPAPSPPSATGLTVYXXXXXXXXXXXXXXXXXX 582
TLRQPA+PG V+TL GRFEILSLSGAFLPAPSPP ATGLTVY
Sbjct: 151 TLRQPAAPGGVITLQGRFEILSLSGAFLPAPSPPGATGLTVYLAGGQGQVVGGSVVGALM 210
Query: 581 XXXXVMVIAATFTNATYERLPVXXXXXXXXXXXXXXXGVNSGTIGVSAPQSHGLADPSSM 402
V+VIAATF+NAT+ERLP+ GVNSGT G SAPQSHGL DPSSM
Sbjct: 211 ASGPVIVIAATFSNATFERLPLEDEPANEGIQMPQTSGVNSGTGGTSAPQSHGLVDPSSM 270
Query: 401 PMYSLPPNLLPNGQMPHDVYW 339
P+Y+LPPNLLPNGQMPHDV+W
Sbjct: 271 PIYNLPPNLLPNGQMPHDVFW 291
Score = 72.8 bits (177), Expect = 4e-10
Identities = 33/49 (67%), Positives = 38/49 (77%)
Frame = -1
Query: 1341 MANRWWTGNVGMGGGDPVSSSPSLHLRNPDDEHGSLGRLGPRREQELMD 1195
M +RWW GNV M DP+SS+PSLHLRN +D+ G L RLGPRREQE MD
Sbjct: 1 MTHRWWAGNVAMR--DPMSSAPSLHLRNTEDDQGGLNRLGPRREQEFMD 47
>emb|CAN75757.1| hypothetical protein VITISV_028561 [Vitis vinifera]
Length = 293
Score = 268 bits (684), Expect = 7e-69
Identities = 136/201 (67%), Positives = 154/201 (76%)
Frame = -2
Query: 941 GSKNKPKPPIIITRESPNALRSHVLEISSGNDIAESIATFARRRQQGVSILSGNGVVTNV 762
GSKNKPKPPI+IT+ESPNALRSHVLEISSG+DIAESIA FA+RR +GVS+LS +G+V NV
Sbjct: 84 GSKNKPKPPIVITKESPNALRSHVLEISSGSDIAESIANFAQRRHRGVSVLSASGIVNNV 143
Query: 761 TLRQPASPGAVVTLHGRFEILSLSGAFLPAPSPPSATGLTVYXXXXXXXXXXXXXXXXXX 582
TLRQPA+PG V+TL GRFEILSLSGAFLPAPSPP ATGLTVY
Sbjct: 144 TLRQPAAPGGVITLQGRFEILSLSGAFLPAPSPPGATGLTVYLAGGQGQVVGGSVVGALM 203
Query: 581 XXXXVMVIAATFTNATYERLPVXXXXXXXXXXXXXXXGVNSGTIGVSAPQSHGLADPSSM 402
V+VIAATF+NAT+ERLP+ GVNSGT G SAPQSHGL DPSSM
Sbjct: 204 ASGPVIVIAATFSNATFERLPLEDEPANEGIQMPQTSGVNSGTGGTSAPQSHGLVDPSSM 263
Query: 401 PMYSLPPNLLPNGQMPHDVYW 339
P+Y++PPNLLPNGQMPHDV+W
Sbjct: 264 PIYNJPPNLLPNGQMPHDVFW 284
>ref|XP_003538420.1| PREDICTED: putative DNA-binding protein ESCAROLA-like [Glycine max]
Length = 289
Score = 229 bits (584), Expect = 3e-57
Identities = 124/202 (61%), Positives = 139/202 (68%), Gaps = 1/202 (0%)
Frame = -2
Query: 941 GSKNKPKPPIIITRESPNALRSHVLEISSGNDIAESIATFARRRQQGVSILSGNGVVTNV 762
GSKNKPKPPI+IT+ESPNALRSHVLEI+SG+D+AESIA FA RR +GVS+LSG+G+V NV
Sbjct: 84 GSKNKPKPPIVITKESPNALRSHVLEITSGSDVAESIAAFANRRHRGVSVLSGSGIVANV 143
Query: 761 TLRQPASPGAVVTLHGRFEILSLSGAFLPAPSPPSATGLTVYXXXXXXXXXXXXXXXXXX 582
TLRQPA+P V+TLHGRFEILSLSGAFLP+PSPP ATGLTVY
Sbjct: 144 TLRQPAAPAGVITLHGRFEILSLSGAFLPSPSPPGATGLTVYLAGGQGQVVGGTVAGSLV 203
Query: 581 XXXXVMVIAATFTNATYERLPVXXXXXXXXXXXXXXXGVNSGTIGVSAPQSHGLADPSSM 402
VMVIAATF NATYERLP+ V QS GL + SM
Sbjct: 204 ASGPVMVIAATFANATYERLPL------EDEQGEEGMQVQQQQQQQQQQQSQGLGEQVSM 257
Query: 401 PMYSLPPNLLPNGQ-MPHDVYW 339
PMY+LPPNLL NGQ MPHDV W
Sbjct: 258 PMYNLPPNLLHNGQNMPHDVLW 279
>gb|ADY38789.1| DNA-binding protein [Coffea arabica]
Length = 289
Score = 228 bits (580), Expect = 8e-57
Identities = 119/202 (58%), Positives = 144/202 (71%), Gaps = 2/202 (0%)
Frame = -2
Query: 941 GSKNKPKPPIIITRESPNALRSHVLEISSGNDIAESIATFARRRQQGVSILSGNGVVTNV 762
GSKNKPKPPI +TR+SPNALRSHV+E+++G+DIAESIA FARRRQ+GV +LS +G VTNV
Sbjct: 79 GSKNKPKPPIFVTRDSPNALRSHVMEVANGSDIAESIAQFARRRQRGVCVLSASGTVTNV 138
Query: 761 TLRQPASPGAVVTLHGRFEILSLSGAFLPAPSPPSATGLTVYXXXXXXXXXXXXXXXXXX 582
TLRQP++PGAV+ LHGRFEILSL+GAFLP P+PP ATGLT+Y
Sbjct: 139 TLRQPSAPGAVMALHGRFEILSLTGAFLPGPAPPGATGLTIYLAGGQGQVVGGSVVGSLV 198
Query: 581 XXXXVMVIAATFTNATYERLPVXXXXXXXXXXXXXXXGVNSGTIGV-SAPQSHGLADPSS 405
VMVIA+TF+NATYERLP+ G S +G APQ GL DPSS
Sbjct: 199 ASGPVMVIASTFSNATYERLPIEEDEEGGGAAQGQLGGNGSPPLGSGGAPQQGGLGDPSS 258
Query: 404 MPMYSLPPNLLPN-GQMPHDVY 342
MP+YSLPPNL+PN GQ+ H+ +
Sbjct: 259 MPVYSLPPNLMPNGGQLNHEAF 280