BLASTX nr result

ID: Coptis24_contig00012845 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012845
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513606.1| multidrug resistance-associated protein 1, 3...   144   6e-33
ref|XP_002331826.1| multidrug resistance protein ABC transporter...   138   5e-31
ref|XP_002267650.2| PREDICTED: ABC transporter C family member 1...   136   2e-30
emb|CBI22551.3| unnamed protein product [Vitis vinifera]              136   2e-30
emb|CAN76203.1| hypothetical protein VITISV_018996 [Vitis vinifera]   136   2e-30

>ref|XP_002513606.1| multidrug resistance-associated protein 1, 3 (mrp1, 3),
            abc-transoprter, putative [Ricinus communis]
            gi|223547514|gb|EEF49009.1| multidrug
            resistance-associated protein 1, 3 (mrp1, 3),
            abc-transoprter, putative [Ricinus communis]
          Length = 1481

 Score =  144 bits (364), Expect = 6e-33
 Identities = 71/84 (84%), Positives = 77/84 (91%)
 Frame = +2

Query: 2    AQNLDLIDTNASPFFHNFAANEWLIGRLEILSATVISSSALAMVLLPPGTFSPGFIGMAF 181
            A+NLDLIDTNASPFFH+FAANEWLI RLE LSATV++S+AL MVLLPPGTFS GFIGMA 
Sbjct: 1117 AKNLDLIDTNASPFFHSFAANEWLIQRLETLSATVLASAALCMVLLPPGTFSSGFIGMAL 1176

Query: 182  SYSLSLNMSLVFSIQNHCTLANYI 253
            SY LSLNMSLVFSIQN CT+ANYI
Sbjct: 1177 SYGLSLNMSLVFSIQNQCTIANYI 1200


>ref|XP_002331826.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222875064|gb|EEF12195.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1423

 Score =  138 bits (347), Expect = 5e-31
 Identities = 68/84 (80%), Positives = 75/84 (89%)
 Frame = +2

Query: 2    AQNLDLIDTNASPFFHNFAANEWLIGRLEILSATVISSSALAMVLLPPGTFSPGFIGMAF 181
            A+ L+LID NASPFFH+FAANEWLI RLEI SATV++S+AL MVLLPPGTF+ GFIGMA 
Sbjct: 1060 AKTLNLIDINASPFFHSFAANEWLIQRLEIFSATVLASAALCMVLLPPGTFNSGFIGMAL 1119

Query: 182  SYSLSLNMSLVFSIQNHCTLANYI 253
            SY LSLNMSLVFSIQN CTLANYI
Sbjct: 1120 SYGLSLNMSLVFSIQNQCTLANYI 1143


>ref|XP_002267650.2| PREDICTED: ABC transporter C family member 10-like [Vitis vinifera]
          Length = 1532

 Score =  136 bits (342), Expect = 2e-30
 Identities = 66/83 (79%), Positives = 73/83 (87%)
 Frame = +2

Query: 5    QNLDLIDTNASPFFHNFAANEWLIGRLEILSATVISSSALAMVLLPPGTFSPGFIGMAFS 184
            +N+D IDTNASPFFH+FAANEWLI RLE LSA V+SSSAL M+LLPPGTF+ GFIGMA S
Sbjct: 1169 KNMDFIDTNASPFFHSFAANEWLIQRLEALSAMVLSSSALCMILLPPGTFTAGFIGMAMS 1228

Query: 185  YSLSLNMSLVFSIQNHCTLANYI 253
            Y LSLN+SLVFSIQN C LANYI
Sbjct: 1229 YGLSLNVSLVFSIQNQCILANYI 1251


>emb|CBI22551.3| unnamed protein product [Vitis vinifera]
          Length = 1395

 Score =  136 bits (342), Expect = 2e-30
 Identities = 66/83 (79%), Positives = 73/83 (87%)
 Frame = +2

Query: 5    QNLDLIDTNASPFFHNFAANEWLIGRLEILSATVISSSALAMVLLPPGTFSPGFIGMAFS 184
            +N+D IDTNASPFFH+FAANEWLI RLE LSA V+SSSAL M+LLPPGTF+ GFIGMA S
Sbjct: 1032 KNMDFIDTNASPFFHSFAANEWLIQRLEALSAMVLSSSALCMILLPPGTFTAGFIGMAMS 1091

Query: 185  YSLSLNMSLVFSIQNHCTLANYI 253
            Y LSLN+SLVFSIQN C LANYI
Sbjct: 1092 YGLSLNVSLVFSIQNQCILANYI 1114


>emb|CAN76203.1| hypothetical protein VITISV_018996 [Vitis vinifera]
          Length = 1480

 Score =  136 bits (342), Expect = 2e-30
 Identities = 66/83 (79%), Positives = 73/83 (87%)
 Frame = +2

Query: 5    QNLDLIDTNASPFFHNFAANEWLIGRLEILSATVISSSALAMVLLPPGTFSPGFIGMAFS 184
            +N+D IDTNASPFFH+FAANEWLI RLE LSA V+SSSAL M+LLPPGTF+ GFIGMA S
Sbjct: 1117 KNMDFIDTNASPFFHSFAANEWLIQRLEALSAMVLSSSALCMILLPPGTFTAGFIGMAMS 1176

Query: 185  YSLSLNMSLVFSIQNHCTLANYI 253
            Y LSLN+SLVFSIQN C LANYI
Sbjct: 1177 YGLSLNVSLVFSIQNQCILANYI 1199


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