BLASTX nr result

ID: Coptis24_contig00012827 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012827
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264591.1| PREDICTED: uncharacterized membrane protein ...   174   7e-42
ref|XP_002264502.1| PREDICTED: uncharacterized membrane protein ...   174   7e-42
ref|XP_002518432.1| conserved hypothetical protein [Ricinus comm...   170   1e-40
ref|XP_003549667.1| PREDICTED: uncharacterized membrane protein ...   167   6e-40
ref|XP_002321139.1| predicted protein [Populus trichocarpa] gi|2...   165   3e-39

>ref|XP_002264591.1| PREDICTED: uncharacterized membrane protein C24H6.13 isoform 2
           [Vitis vinifera]
          Length = 766

 Score =  174 bits (441), Expect = 7e-42
 Identities = 85/120 (70%), Positives = 98/120 (81%), Gaps = 1/120 (0%)
 Frame = +2

Query: 2   LLSTKQAAQSTPFLIVLPVLTIWFHRFCKSRFEPAFVRYPLKEAMMKDTLERTRERNLNL 181
           LLSTKQAAQSTPFLI LP+LTI FH +CK RFEPAF+RYPL+EA MKDTLER RE +LNL
Sbjct: 638 LLSTKQAAQSTPFLIALPILTISFHYYCKGRFEPAFIRYPLQEAKMKDTLERAREPHLNL 697

Query: 182 KEYLQNAYLHPVFKSGEDEDSDRVSAEW-GQSSLVPTKRQSRMNTLLPGRFSGSSSPLLP 358
           K YLQ AY+HPVFKS ED++ + +  +W   + LVPTKRQSR NT LP +FSGSSSP LP
Sbjct: 698 KGYLQTAYIHPVFKSAEDDEEEEIHGKWEHDAELVPTKRQSRRNTPLPSKFSGSSSPSLP 757


>ref|XP_002264502.1| PREDICTED: uncharacterized membrane protein C24H6.13 isoform 1 [Vitis
            vinifera] gi|302144095|emb|CBI23200.3| unnamed protein
            product [Vitis vinifera]
          Length = 771

 Score =  174 bits (441), Expect = 7e-42
 Identities = 85/120 (70%), Positives = 98/120 (81%), Gaps = 1/120 (0%)
 Frame = +2

Query: 2    LLSTKQAAQSTPFLIVLPVLTIWFHRFCKSRFEPAFVRYPLKEAMMKDTLERTRERNLNL 181
            LLSTKQAAQSTPFLI LP+LTI FH +CK RFEPAF+RYPL+EA MKDTLER RE +LNL
Sbjct: 643  LLSTKQAAQSTPFLIALPILTISFHYYCKGRFEPAFIRYPLQEAKMKDTLERAREPHLNL 702

Query: 182  KEYLQNAYLHPVFKSGEDEDSDRVSAEW-GQSSLVPTKRQSRMNTLLPGRFSGSSSPLLP 358
            K YLQ AY+HPVFKS ED++ + +  +W   + LVPTKRQSR NT LP +FSGSSSP LP
Sbjct: 703  KGYLQTAYIHPVFKSAEDDEEEEIHGKWEHDAELVPTKRQSRRNTPLPSKFSGSSSPSLP 762


>ref|XP_002518432.1| conserved hypothetical protein [Ricinus communis]
            gi|223542277|gb|EEF43819.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 773

 Score =  170 bits (431), Expect = 1e-40
 Identities = 87/122 (71%), Positives = 102/122 (83%), Gaps = 4/122 (3%)
 Frame = +2

Query: 2    LLSTKQAAQSTPFLIVLPVLTIWFHRFCKSRFEPAFVRYPLKEAMMKDTLERTRERNLNL 181
            LLSTK+AAQSTPFLIVLPVLTIWFHRFCK R+EPAFV+YPL+EAMMKDTLER RE NLNL
Sbjct: 643  LLSTKRAAQSTPFLIVLPVLTIWFHRFCKGRYEPAFVKYPLQEAMMKDTLERAREPNLNL 702

Query: 182  KEYLQNAYLHPVFKS---GEDEDSDRVSAEW-GQSSLVPTKRQSRMNTLLPGRFSGSSSP 349
            K +LQNAY HPVFK+    +D+++D +S +   +S LVPTKRQSR NT +P R SG+SSP
Sbjct: 703  KPFLQNAYRHPVFKNDDGDDDDENDDISEKLETESVLVPTKRQSRRNTPVPSRISGASSP 762

Query: 350  LL 355
             L
Sbjct: 763  SL 764


>ref|XP_003549667.1| PREDICTED: uncharacterized membrane protein C2G11.09 [Glycine max]
          Length = 775

 Score =  167 bits (424), Expect = 6e-40
 Identities = 87/123 (70%), Positives = 98/123 (79%), Gaps = 4/123 (3%)
 Frame = +2

Query: 2    LLSTKQAAQSTPFLIVLPVLTIWFHRFCKSRFEPAFVRYPLKEAMMKDTLERTRERNLNL 181
            LL+TK+AA STPFLIVLPVLTIWFH +CK RFEPAFVRYPL+EAMMKDTLER  + N NL
Sbjct: 643  LLTTKKAASSTPFLIVLPVLTIWFHIYCKGRFEPAFVRYPLQEAMMKDTLERATDPNFNL 702

Query: 182  KEYLQNAYLHPVFKSG---EDEDSDRVSAEWGQSSL-VPTKRQSRMNTLLPGRFSGSSSP 349
            K YLQNAY+HPVFK+    EDED + +S +    SL VPTKRQSR NT LP R SG+SSP
Sbjct: 703  KAYLQNAYVHPVFKASLFDEDEDEEVMSLKLETESLTVPTKRQSRRNTPLPSRISGASSP 762

Query: 350  LLP 358
             LP
Sbjct: 763  SLP 765


>ref|XP_002321139.1| predicted protein [Populus trichocarpa] gi|222861912|gb|EEE99454.1|
           predicted protein [Populus trichocarpa]
          Length = 768

 Score =  165 bits (418), Expect = 3e-39
 Identities = 82/114 (71%), Positives = 91/114 (79%), Gaps = 1/114 (0%)
 Frame = +2

Query: 2   LLSTKQAAQSTPFLIVLPVLTIWFHRFCKSRFEPAFVRYPLKEAMMKDTLERTRERNLNL 181
           LLSTK+AAQSTP LI LP+LTIWFH FCK R+EPAFVRYPL+EAMMKDTLER RE NLNL
Sbjct: 641 LLSTKEAAQSTPLLITLPILTIWFHLFCKGRYEPAFVRYPLQEAMMKDTLERAREPNLNL 700

Query: 182 KEYLQNAYLHPVFKSGEDEDSDRVSAEW-GQSSLVPTKRQSRMNTLLPGRFSGS 340
           K +LQNAY HPVFK  +D DSD    E+  +  LVPTKRQSR NT LP + SGS
Sbjct: 701 KSFLQNAYSHPVFKGEDDSDSDEAPEEFEKEPDLVPTKRQSRRNTPLPSKHSGS 754


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