BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012825
         (729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270774.2| PREDICTED: glycyl-tRNA synthetase 2, chlorop...   379   e-103
ref|XP_002511579.1| Glycyl-tRNA synthetase 2, chloroplast/mitoch...   369   e-100
ref|XP_003520424.1| PREDICTED: glycyl-tRNA synthetase 2, chlorop...   366   2e-99
gb|ABK96073.1| unknown [Populus trichocarpa]                          362   4e-98
ref|XP_002327033.1| predicted protein [Populus trichocarpa] gi|2...   360   2e-97

>ref|XP_002270774.2| PREDICTED: glycyl-tRNA synthetase 2, chloroplastic/mitochondrial-like
            [Vitis vinifera] gi|297734621|emb|CBI16672.3| unnamed
            protein product [Vitis vinifera]
          Length = 1071

 Score =  379 bits (974), Expect = e-103
 Identities = 188/242 (77%), Positives = 218/242 (90%)
 Frame = +2

Query: 2    GNEAVLRARYEDAKFFYEMDLRKNFYDFRSHLKGVLFHEKLGTMLDKMTRVQNTVTKLSL 181
            GNEAVLRARYEDAKFFYEMD RK F +FRS L+G+LFHEKLGTMLDKM RVQN V +LSL
Sbjct: 699  GNEAVLRARYEDAKFFYEMDTRKKFSEFRSQLEGILFHEKLGTMLDKMIRVQNMVAELSL 758

Query: 182  AFGLNKDQLQVVQGAAMLAMADLSTAVVTEFTSLSGIMARHYALKDGYSEQIAEALFEIM 361
            A  +N+D+LQ++Q AA LAM+DL+TAVVTEFTSLSGIMARHYAL+DGYSEQIAEALFEI 
Sbjct: 759  ALQVNEDKLQIIQDAASLAMSDLATAVVTEFTSLSGIMARHYALRDGYSEQIAEALFEIT 818

Query: 362  LPRFSGDILPKTDPGIVLAIADRLDTLVGLFGVGCQPTSTNDPLGLRRISYGLVQILVEN 541
            LPR SGDI+PKTD GIVLA+ADRLD+LVGLFG GCQP+STNDP GLRRISYGLVQ+LVE 
Sbjct: 819  LPRNSGDIVPKTDVGIVLAVADRLDSLVGLFGAGCQPSSTNDPFGLRRISYGLVQVLVEK 878

Query: 542  DKNLDIRSSLEVAAEVQPIQVDHTVVDNVHQFVTRRLEQYLVDKGISPEVVRSILLERSN 721
            DKNLD+R +L++AA VQPI ++  ++D+VHQFVTRRLEQ+LVD+ ISPEVVRSIL ER+N
Sbjct: 879  DKNLDLRHALQLAAAVQPITIEANIIDDVHQFVTRRLEQFLVDREISPEVVRSILTERAN 938

Query: 722  FP 727
            +P
Sbjct: 939  WP 940


>ref|XP_002511579.1| Glycyl-tRNA synthetase 2, chloroplast/mitochondrial precursor,
            putative [Ricinus communis] gi|223548759|gb|EEF50248.1|
            Glycyl-tRNA synthetase 2, chloroplast/mitochondrial
            precursor, putative [Ricinus communis]
          Length = 1069

 Score =  369 bits (948), Expect = e-100
 Identities = 181/242 (74%), Positives = 212/242 (87%)
 Frame = +2

Query: 2    GNEAVLRARYEDAKFFYEMDLRKNFYDFRSHLKGVLFHEKLGTMLDKMTRVQNTVTKLSL 181
            GNEAVLRARYEDAKFFYEMD RK F +FRS LKG+LFHEKLGTMLDKMTR++N VTKLS 
Sbjct: 697  GNEAVLRARYEDAKFFYEMDTRKKFSEFRSQLKGILFHEKLGTMLDKMTRIENMVTKLSA 756

Query: 182  AFGLNKDQLQVVQGAAMLAMADLSTAVVTEFTSLSGIMARHYALKDGYSEQIAEALFEIM 361
              G+ +D LQ VQ AA LAM+DL+TAVVTEFTSLSGIMARHYAL+DGYSEQ+AEAL +I 
Sbjct: 757  LLGIREDLLQTVQDAASLAMSDLATAVVTEFTSLSGIMARHYALRDGYSEQVAEALLDIT 816

Query: 362  LPRFSGDILPKTDPGIVLAIADRLDTLVGLFGVGCQPTSTNDPLGLRRISYGLVQILVEN 541
            LPRFSGD+LPKTD GI+LA+ADRLD+L+GLF  GCQP+STNDP GLRRISYGLVQILVE 
Sbjct: 817  LPRFSGDVLPKTDVGILLAVADRLDSLIGLFAAGCQPSSTNDPFGLRRISYGLVQILVEK 876

Query: 542  DKNLDIRSSLEVAAEVQPIQVDHTVVDNVHQFVTRRLEQYLVDKGISPEVVRSILLERSN 721
            ++NLD+  +L +AA+VQPI+VD  ++D+ +QFVTRRLEQYLVDK ISPE+VRS+L ER+ 
Sbjct: 877  ERNLDLAHALRLAADVQPIKVDAHLIDDAYQFVTRRLEQYLVDKEISPEIVRSVLAERAT 936

Query: 722  FP 727
             P
Sbjct: 937  LP 938


>ref|XP_003520424.1| PREDICTED: glycyl-tRNA synthetase 2, chloroplastic/mitochondrial-like
            [Glycine max]
          Length = 1074

 Score =  366 bits (940), Expect = 2e-99
 Identities = 182/242 (75%), Positives = 212/242 (87%)
 Frame = +2

Query: 2    GNEAVLRARYEDAKFFYEMDLRKNFYDFRSHLKGVLFHEKLGTMLDKMTRVQNTVTKLSL 181
            GNEAVLRARYEDAKFFYEMD RK F +FR  LK +LFHEKLGTMLDKMTRV+N VTKLS 
Sbjct: 702  GNEAVLRARYEDAKFFYEMDTRKRFSEFRKQLKNILFHEKLGTMLDKMTRVENMVTKLSC 761

Query: 182  AFGLNKDQLQVVQGAAMLAMADLSTAVVTEFTSLSGIMARHYALKDGYSEQIAEALFEIM 361
               +N+D  Q+++ A+ LAM+DL+TAVVTEFTSLSGIM RHYAL+DGYSEQIAEAL EI 
Sbjct: 762  LLDINEDVQQIIRDASSLAMSDLATAVVTEFTSLSGIMGRHYALRDGYSEQIAEALLEIT 821

Query: 362  LPRFSGDILPKTDPGIVLAIADRLDTLVGLFGVGCQPTSTNDPLGLRRISYGLVQILVEN 541
            LPRFSGDILPK+D GIVLAIADRLD+L+GLF  GCQP+STNDP GLRRISYGLVQ+LVE 
Sbjct: 822  LPRFSGDILPKSDAGIVLAIADRLDSLLGLFTAGCQPSSTNDPFGLRRISYGLVQLLVEK 881

Query: 542  DKNLDIRSSLEVAAEVQPIQVDHTVVDNVHQFVTRRLEQYLVDKGISPEVVRSILLERSN 721
            +KNLD + +LE+AA+VQ I+VD  V+D+VHQFVTRRLEQ+LVDKG++ E VRSIL+ER+N
Sbjct: 882  NKNLDFKKALELAADVQSIKVDPHVIDDVHQFVTRRLEQFLVDKGVNAEFVRSILVERAN 941

Query: 722  FP 727
            FP
Sbjct: 942  FP 943


>gb|ABK96073.1| unknown [Populus trichocarpa]
          Length = 512

 Score =  362 bits (929), Expect = 4e-98
 Identities = 178/242 (73%), Positives = 213/242 (88%)
 Frame = +2

Query: 2   GNEAVLRARYEDAKFFYEMDLRKNFYDFRSHLKGVLFHEKLGTMLDKMTRVQNTVTKLSL 181
           GNEAVLRARYEDAKFFYEMD RK F +FR+ L G+LFHEKLGTMLDKM RV+N +TKL++
Sbjct: 140 GNEAVLRARYEDAKFFYEMDTRKKFSEFRNQLDGILFHEKLGTMLDKMMRVENVITKLTV 199

Query: 182 AFGLNKDQLQVVQGAAMLAMADLSTAVVTEFTSLSGIMARHYALKDGYSEQIAEALFEIM 361
             G+N+D +QVVQ AA LAM+DL+TAVVTEFT+LSGIMARHYAL++GYS QIAEAL EI 
Sbjct: 200 ELGVNEDVIQVVQDAASLAMSDLATAVVTEFTALSGIMARHYALREGYSAQIAEALLEIT 259

Query: 362 LPRFSGDILPKTDPGIVLAIADRLDTLVGLFGVGCQPTSTNDPLGLRRISYGLVQILVEN 541
           LPRFSGD++PKTD GIVLAIADRLD+LVGLF  GCQP+S NDP GLRRISYGLVQILV+N
Sbjct: 260 LPRFSGDMVPKTDAGIVLAIADRLDSLVGLFAAGCQPSSANDPFGLRRISYGLVQILVDN 319

Query: 542 DKNLDIRSSLEVAAEVQPIQVDHTVVDNVHQFVTRRLEQYLVDKGISPEVVRSILLERSN 721
           DKNLD+  +L +AA+VQPI+ D +++++VH FVTRRLEQ+LVDKGI PE+VRS+L ER++
Sbjct: 320 DKNLDLVRALRLAADVQPIKADVSMINDVHLFVTRRLEQFLVDKGIRPEIVRSVLAERAS 379

Query: 722 FP 727
            P
Sbjct: 380 SP 381


>ref|XP_002327033.1| predicted protein [Populus trichocarpa] gi|222835348|gb|EEE73783.1|
           predicted protein [Populus trichocarpa]
          Length = 512

 Score =  360 bits (923), Expect = 2e-97
 Identities = 177/242 (73%), Positives = 212/242 (87%)
 Frame = +2

Query: 2   GNEAVLRARYEDAKFFYEMDLRKNFYDFRSHLKGVLFHEKLGTMLDKMTRVQNTVTKLSL 181
           GNEAVLRARYEDAKFFYEMD RK F +FR+ L G+LFHEKLGTMLDKM RV+N +TKL++
Sbjct: 140 GNEAVLRARYEDAKFFYEMDTRKKFSEFRNQLNGILFHEKLGTMLDKMMRVENMITKLTV 199

Query: 182 AFGLNKDQLQVVQGAAMLAMADLSTAVVTEFTSLSGIMARHYALKDGYSEQIAEALFEIM 361
             G+N+D +QVVQ AA LAM+DL+TAVVTEFT+LSGIMARHYAL++GYS QIAEAL EI 
Sbjct: 200 ELGVNEDVIQVVQDAASLAMSDLATAVVTEFTALSGIMARHYALREGYSAQIAEALLEIT 259

Query: 362 LPRFSGDILPKTDPGIVLAIADRLDTLVGLFGVGCQPTSTNDPLGLRRISYGLVQILVEN 541
           LPRFSGD++PKTD GIVLAIADRLD+LVGLF  GCQP+S NDP GLRRISY LVQILV+N
Sbjct: 260 LPRFSGDMVPKTDAGIVLAIADRLDSLVGLFAAGCQPSSANDPFGLRRISYALVQILVDN 319

Query: 542 DKNLDIRSSLEVAAEVQPIQVDHTVVDNVHQFVTRRLEQYLVDKGISPEVVRSILLERSN 721
           DKNLD+  +L +AA+VQPI+ D +++++VH FVTRRLEQ+LVDKGI PE+VRS+L ER++
Sbjct: 320 DKNLDLVRALRLAADVQPIKADVSMINDVHLFVTRRLEQFLVDKGIRPEIVRSVLAERAS 379

Query: 722 FP 727
            P
Sbjct: 380 SP 381