BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012822
         (691 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514664.1| activating signal cointegrator 1 complex sub...   213   4e-53
ref|XP_002284129.1| PREDICTED: activating signal cointegrator 1 ...   199   6e-49
ref|XP_003598950.1| Activating signal cointegrator 1 complex sub...   196   3e-48
emb|CAN79622.1| hypothetical protein VITISV_035896 [Vitis vinifera]   196   5e-48
ref|NP_200922.2| U5 small nuclear ribonucleoprotein helicase [Ar...   194   2e-47

>ref|XP_002514664.1| activating signal cointegrator 1 complex subunit 3, helc1, putative
           [Ricinus communis] gi|223546268|gb|EEF47770.1|
           activating signal cointegrator 1 complex subunit 3,
           helc1, putative [Ricinus communis]
          Length = 2100

 Score =  213 bits (541), Expect = 4e-53
 Identities = 116/210 (55%), Positives = 149/210 (70%), Gaps = 3/210 (1%)
 Frame = +2

Query: 71  MLVQLPRLTNSLRNHFDVDQAYLQRKLFLQN-HNSQRPVTNSLDDSELARKIVHRWEEAS 247
           ML+QLPRLTNSLR  FD+DQAYLQRK+ LQN H   R   NSL++SELARKIV RWEEAS
Sbjct: 1   MLMQLPRLTNSLREPFDIDQAYLQRKIILQNYHLKPRNNANSLNESELARKIVDRWEEAS 60

Query: 248 SEVRKSYKQFLGAVVELIDNDVPSEELHEVAKTVYDSFHDLGEGED--VKRSIADKKREL 421
           +EVR++YKQF+GAVVEL+D +VPSEE  EVA T Y  F   G GE+  V+ +  + K EL
Sbjct: 61  TEVRQAYKQFIGAVVELVDGEVPSEEFREVALTAYRLFAGPGPGEEDIVRSNFLNNKSEL 120

Query: 422 QKHLGYTFSDVNIQKAASLAQRLFMLQPNDYEASVASETEVGSIANNGSEFGSELVFNVP 601
           QK +G+ FSD  +QK A+LAQRL+ LQP +  A++  E+ V    ++  EFG++LVF  P
Sbjct: 121 QKIIGHAFSDAKLQKVATLAQRLYNLQPTNSGAALVPESHVNGTGDD-IEFGADLVFQAP 179

Query: 602 ARFVADVPMDDGLFLEDESCVTSTSLNEQW 691
           ARF+ D+ ++DG  L DE+   S S  E W
Sbjct: 180 ARFLVDITLEDGELLGDETAGPS-SFREGW 208


>ref|XP_002284129.1| PREDICTED: activating signal cointegrator 1 complex subunit 3
           [Vitis vinifera] gi|297733882|emb|CBI15129.3| unnamed
           protein product [Vitis vinifera]
          Length = 2093

 Score =  199 bits (505), Expect = 6e-49
 Identities = 112/207 (54%), Positives = 140/207 (67%)
 Frame = +2

Query: 71  MLVQLPRLTNSLRNHFDVDQAYLQRKLFLQNHNSQRPVTNSLDDSELARKIVHRWEEASS 250
           MLVQLPRLTNSLR+ FDVD AYLQRKL LQNHN  R   NS+++SELARKIVH W+EAS 
Sbjct: 1   MLVQLPRLTNSLRDPFDVDHAYLQRKLILQNHNP-RSDANSVEESELARKIVHGWDEASI 59

Query: 251 EVRKSYKQFLGAVVELIDNDVPSEELHEVAKTVYDSFHDLGEGEDVKRSIADKKRELQKH 430
           EV ++YK F+ AVVELID +V SE   EVA  VY+ F    +  +    IA+KK ELQK 
Sbjct: 60  EVCQAYKHFIAAVVELIDGEVASEYFREVALLVYNLFTGPRDEYEDDTRIAEKKLELQKL 119

Query: 431 LGYTFSDVNIQKAASLAQRLFMLQPNDYEASVASETEVGSIANNGSEFGSELVFNVPARF 610
           LGY  SD N+QK ASLAQRLF LQPN+    +  E +V   +++  EFG+ L F  P+RF
Sbjct: 120 LGYVVSDANLQKVASLAQRLFNLQPNNLVTGLVHERQVHG-SSDDVEFGANLAFQAPSRF 178

Query: 611 VADVPMDDGLFLEDESCVTSTSLNEQW 691
           + D  ++D  FL +ES   S    ++W
Sbjct: 179 LVDASLEDEEFLGEESAPPSAG-RDRW 204


>ref|XP_003598950.1| Activating signal cointegrator 1 complex subunit [Medicago
           truncatula] gi|355487998|gb|AES69201.1| Activating
           signal cointegrator 1 complex subunit [Medicago
           truncatula]
          Length = 1465

 Score =  196 bits (499), Expect = 3e-48
 Identities = 104/208 (50%), Positives = 147/208 (70%), Gaps = 1/208 (0%)
 Frame = +2

Query: 71  MLVQLPRLTNSLRNHFDVDQAYLQRKLFLQNHNSQRPVTNSLDDSELARKIVHRWEEASS 250
           ML+Q+PRLTNSLR+ FD+D+AYL RK  LQN N+ R V +SLD+SELARKIV+ WEEASS
Sbjct: 1   MLIQIPRLTNSLRDPFDIDEAYLHRKTVLQNRNT-RNVASSLDESELARKIVYGWEEASS 59

Query: 251 EVRKSYKQFLGAVVELIDNDVPSEELHEVAKTVYDSF-HDLGEGEDVKRSIADKKRELQK 427
           EVR++YKQF+GAVV L+D ++ SE+ HEVA TVY  F   + E + + R I DKK ELQ 
Sbjct: 60  EVRQAYKQFIGAVVGLVDGEMRSEDFHEVALTVYRLFSRPIDEEDSINRIIYDKKLELQN 119

Query: 428 HLGYTFSDVNIQKAASLAQRLFMLQPNDYEASVASETEVGSIANNGSEFGSELVFNVPAR 607
            +G+  +D  +++ A++AQ+L  LQPN+  ++V+ E +       G EFG +LVF  PAR
Sbjct: 120 LVGHAIADAKLREVAAIAQKLLNLQPNNTNSAVSLERD--HDVKEGMEFGDDLVFQAPAR 177

Query: 608 FVADVPMDDGLFLEDESCVTSTSLNEQW 691
           F+ DV +DDG  ++ ++ V+     E++
Sbjct: 178 FLIDVSLDDGDIMDFKNTVSLGFQKEEY 205


>emb|CAN79622.1| hypothetical protein VITISV_035896 [Vitis vinifera]
          Length = 735

 Score =  196 bits (497), Expect = 5e-48
 Identities = 111/207 (53%), Positives = 139/207 (67%)
 Frame = +2

Query: 71  MLVQLPRLTNSLRNHFDVDQAYLQRKLFLQNHNSQRPVTNSLDDSELARKIVHRWEEASS 250
           MLVQL RLTNSLR+ FDVD AYLQRKL LQNHN  R   NS+++SELARKIVH W+EAS 
Sbjct: 1   MLVQLXRLTNSLRDPFDVDHAYLQRKLILQNHNP-RSDANSVEESELARKIVHGWDEASI 59

Query: 251 EVRKSYKQFLGAVVELIDNDVPSEELHEVAKTVYDSFHDLGEGEDVKRSIADKKRELQKH 430
           EV ++YK F+ AVVELID +V SE   EVA  VY+ F    +  +    IA+KK ELQK 
Sbjct: 60  EVCQAYKHFIAAVVELIDGEVASEYFREVALLVYNLFTGPRDEYEDDTRIAEKKLELQKL 119

Query: 431 LGYTFSDVNIQKAASLAQRLFMLQPNDYEASVASETEVGSIANNGSEFGSELVFNVPARF 610
           LGY  SD N+QK ASLAQRLF LQPN+    +  E +V   +++  EFG+ L F  P+RF
Sbjct: 120 LGYVVSDANLQKVASLAQRLFNLQPNNLVTGLVHERQVHG-SSDDVEFGANLAFQAPSRF 178

Query: 611 VADVPMDDGLFLEDESCVTSTSLNEQW 691
           + D  ++D  FL +ES   S    ++W
Sbjct: 179 LVDASLEDEEFLGEESAPPSAG-RDRW 204


>ref|NP_200922.2| U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana]
           gi|332010042|gb|AED97425.1| U5 small nuclear
           ribonucleoprotein helicase [Arabidopsis thaliana]
          Length = 2146

 Score =  194 bits (492), Expect = 2e-47
 Identities = 105/211 (49%), Positives = 141/211 (66%), Gaps = 4/211 (1%)
 Frame = +2

Query: 71  MLVQLPRLTNSLRNHFDVDQAYLQRKLFLQNHNSQRPVTNSLDDSELARKIVHRWEEASS 250
           MLVQLPRLT+SLR  FD+DQAYL+RK  LQ  N  R   N LD+S+LA++IVH+WE AS 
Sbjct: 72  MLVQLPRLTSSLREPFDIDQAYLRRKTILQTLNKPRSSGNRLDESDLAKRIVHQWEGASL 131

Query: 251 EVRKSYKQFLGAVVELIDNDVPSEELHEVAKTVYDSFHDLGEGEDV----KRSIADKKRE 418
           EVR++YKQF+GAVVELID +VPS+E  EVA + Y  F++  E +D       SI+ KK E
Sbjct: 132 EVRQAYKQFIGAVVELIDREVPSDEFREVAFSAYRLFNNPVEEDDSDINDNISISGKKLE 191

Query: 419 LQKHLGYTFSDVNIQKAASLAQRLFMLQPNDYEASVASETEVGSIANNGSEFGSELVFNV 598
           LQ  +G+  SD N++  AS AQ L+ +QP     + A E       N G+EFG++LVFN+
Sbjct: 192 LQNLVGHAVSDANVKNVASFAQALYSIQPTHQSETYADE------VNGGAEFGADLVFNL 245

Query: 599 PARFVADVPMDDGLFLEDESCVTSTSLNEQW 691
           PARF+ +  +D+  F++ ES    TS +E W
Sbjct: 246 PARFLVEASLDETGFVDVESNDAHTSFSEGW 276