BLASTX nr result

ID: Coptis24_contig00012811 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012811
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266816.1| PREDICTED: ABC transporter I family member 1...   143   2e-32
emb|CAN70271.1| hypothetical protein VITISV_010974 [Vitis vinifera]   140   1e-31
ref|XP_002522043.1| phosphate abc transporter, putative [Ricinus...   139   2e-31
ref|XP_002325227.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31
ref|XP_002888648.1| ATNAP3 [Arabidopsis lyrata subsp. lyrata] gi...   138   4e-31

>ref|XP_002266816.1| PREDICTED: ABC transporter I family member 17 [Vitis vinifera]
           gi|297735429|emb|CBI17869.3| unnamed protein product
           [Vitis vinifera]
          Length = 268

 Score =  143 bits (360), Expect = 2e-32
 Identities = 77/119 (64%), Positives = 91/119 (76%), Gaps = 3/119 (2%)
 Frame = -3

Query: 350 SLTTMDTNSDSSQDHLIVAMEELDP---KLKFRVCDLNKVSDAGVTILRGVSVDIPKGMI 180
           S TT   +S  + + LI+ +EE +    K KFRV +L KVS++G  ILRG+ VD+PKG I
Sbjct: 3   SATTPFLDSSPAVEPLILQVEEEEDGERKPKFRVRNLIKVSESGEAILRGIDVDVPKGAI 62

Query: 179 IGVIGPSGSGKSTLLRALNRLWEPPLDTVFFDGKDICDLDVLKLRRKVGMLFQLPVLFE 3
           +GVIGPSGSGKSTLLR LNRLWEPP  TV+ DG DI +LDVL LRRKVGMLFQLPVLFE
Sbjct: 63  VGVIGPSGSGKSTLLRVLNRLWEPPSGTVYLDGTDIRELDVLGLRRKVGMLFQLPVLFE 121


>emb|CAN70271.1| hypothetical protein VITISV_010974 [Vitis vinifera]
          Length = 251

 Score =  140 bits (353), Expect = 1e-31
 Identities = 71/102 (69%), Positives = 82/102 (80%)
 Frame = -3

Query: 308 HLIVAMEELDPKLKFRVCDLNKVSDAGVTILRGVSVDIPKGMIIGVIGPSGSGKSTLLRA 129
           H +   E+ + K KFRV +L KVS++G  ILRG+ VD+PKG I+GVIGPSGSGKSTLLR 
Sbjct: 3   HHVEEEEDGERKPKFRVRNLIKVSESGEAILRGIDVDVPKGAIVGVIGPSGSGKSTLLRV 62

Query: 128 LNRLWEPPLDTVFFDGKDICDLDVLKLRRKVGMLFQLPVLFE 3
           LNRLWEPP  TV+ DG DI +LDVL LRRKVGMLFQLPVLFE
Sbjct: 63  LNRLWEPPSGTVYLDGTDIRELDVLGLRRKVGMLFQLPVLFE 104


>ref|XP_002522043.1| phosphate abc transporter, putative [Ricinus communis]
           gi|223538642|gb|EEF40243.1| phosphate abc transporter,
           putative [Ricinus communis]
          Length = 276

 Score =  139 bits (351), Expect = 2e-31
 Identities = 69/122 (56%), Positives = 90/122 (73%), Gaps = 6/122 (4%)
 Frame = -3

Query: 350 SLTTMDTNSDSSQDHLIV------AMEELDPKLKFRVCDLNKVSDAGVTILRGVSVDIPK 189
           SL+ +   +D + +HL+       A +  D + KFR+ +L + +D G  IL GV++D+PK
Sbjct: 8   SLSRVSAANDGTLEHLLTVTDIESATDNDDNQYKFRIRNLTRETDGGAKILNGVNLDVPK 67

Query: 188 GMIIGVIGPSGSGKSTLLRALNRLWEPPLDTVFFDGKDICDLDVLKLRRKVGMLFQLPVL 9
           G+I+G++GPSGSGKST LR+LNRLWEPP  TVF DG DI DLDVL LRRKVGMLFQ+PVL
Sbjct: 68  GVIVGIVGPSGSGKSTFLRSLNRLWEPPPGTVFLDGCDIRDLDVLSLRRKVGMLFQIPVL 127

Query: 8   FE 3
           FE
Sbjct: 128 FE 129


>ref|XP_002325227.1| predicted protein [Populus trichocarpa] gi|222866661|gb|EEF03792.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score =  139 bits (351), Expect = 2e-31
 Identities = 67/89 (75%), Positives = 77/89 (86%)
 Frame = -3

Query: 269 KFRVCDLNKVSDAGVTILRGVSVDIPKGMIIGVIGPSGSGKSTLLRALNRLWEPPLDTVF 90
           KFR+ +L KVSDAGV IL G+++DIPKGMI+G+IGPSGSGKST+LRALNRLWEPP  TVF
Sbjct: 37  KFRIRNLTKVSDAGVPILNGINMDIPKGMIVGIIGPSGSGKSTVLRALNRLWEPPSGTVF 96

Query: 89  FDGKDICDLDVLKLRRKVGMLFQLPVLFE 3
            DG D+ DLDVL  RRKVGMLFQLP LF+
Sbjct: 97  LDGHDVKDLDVLGHRRKVGMLFQLPALFD 125


>ref|XP_002888648.1| ATNAP3 [Arabidopsis lyrata subsp. lyrata]
           gi|297334489|gb|EFH64907.1| ATNAP3 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 262

 Score =  138 bits (348), Expect = 4e-31
 Identities = 70/109 (64%), Positives = 88/109 (80%), Gaps = 1/109 (0%)
 Frame = -3

Query: 326 SDSSQDHLI-VAMEELDPKLKFRVCDLNKVSDAGVTILRGVSVDIPKGMIIGVIGPSGSG 150
           SD  ++HL+ V +   +PK+  RV DL +V+D G  IL+GV+VDIPKG+I+GVIGPSGSG
Sbjct: 9   SDGLREHLVDVGVSGSEPKI--RVHDLTRVADDGSRILKGVTVDIPKGLIVGVIGPSGSG 66

Query: 149 KSTLLRALNRLWEPPLDTVFFDGKDICDLDVLKLRRKVGMLFQLPVLFE 3
           KST LR+LNRLWEPP  TVF DG+DI  +DV+ LRR+VGMLFQLPVLF+
Sbjct: 67  KSTFLRSLNRLWEPPESTVFLDGEDITKVDVIALRRRVGMLFQLPVLFQ 115


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