BLASTX nr result

ID: Coptis24_contig00012809 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012809
         (770 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267795.1| PREDICTED: putative disease resistance prote...   115   1e-23
ref|XP_003632842.1| PREDICTED: putative disease resistance prote...   110   3e-22
ref|XP_002518080.1| leucine-rich repeat-containing protein, puta...   109   6e-22
ref|XP_002268266.2| PREDICTED: putative disease resistance prote...   108   1e-21
ref|XP_002268589.2| PREDICTED: putative disease resistance prote...   106   5e-21

>ref|XP_002267795.1| PREDICTED: putative disease resistance protein RGA3-like [Vitis
           vinifera]
          Length = 928

 Score =  115 bits (288), Expect = 1e-23
 Identities = 70/174 (40%), Positives = 97/174 (55%), Gaps = 2/174 (1%)
 Frame = +2

Query: 251 MADALVFAVMEQLTSXXXXXXXXXXXXXXXXXQEIGKLSSALTMLQAVLDDXXXXXXXXX 430
           MADALV  V+E+L S                  E+  L S L  ++AVL D         
Sbjct: 1   MADALVSIVLERLASVLEQQIRQQVTLVVGVESEVDNLKSTLQSIRAVLGDAEKRQFTEE 60

Query: 431 XXXLWLEKLKDVVYDADDVLDEWNTRTIISQIHGVDDDAVNGGI-RNKVLSYLFSPCFRF 607
              +WLE+LKD+ Y  DDV+D W+T  +  QI      A N GI + K+ S L SPC  F
Sbjct: 61  LVKVWLERLKDISYQMDDVVDGWSTALLKLQIA-----AENPGIPKPKISSCLPSPCVCF 115

Query: 608 KDVGFRHDIGIKIKQVRERLNVIAEEKNQYNLIARQSSVRP-RQLTSSVIDVSK 766
           K V  RHDI ++IK ++++LN IA E+NQ+N ++     +P R++TSSVIDVS+
Sbjct: 116 KQVSLRHDIALQIKDIKKQLNAIANERNQFNFVSSSIIQQPHRRITSSVIDVSQ 169


>ref|XP_003632842.1| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 1006

 Score =  110 bits (276), Expect = 3e-22
 Identities = 70/173 (40%), Positives = 99/173 (57%), Gaps = 1/173 (0%)
 Frame = +2

Query: 251 MADALVFAVMEQLTSXXXXXXXXXXXXXXXXXQEIGKLSSALTMLQAVLDDXXXXXXXXX 430
           MADALV  V+E+L S                  E+  L+S L  ++AVL D         
Sbjct: 1   MADALVSIVLERLASVLEQQVTLVVGVG----SEVDNLNSTLQSIRAVLADAEKRQFSEE 56

Query: 431 XXXLWLEKLKDVVYDADDVLDEWNTRTIISQIHGVDDDAVNGGIRNKVLSYLFSPCFRFK 610
              +WLE+LKD+ Y  DDV+D WNT  +  QI G ++  +    + K+ S L SPC  FK
Sbjct: 57  LVKVWLERLKDISYQMDDVVDGWNTALLKLQI-GAENPCIP---KLKISSCLPSPCVCFK 112

Query: 611 DVGFRHDIGIKIKQVRERLNVIAEEKNQYNLIARQSSVRP-RQLTSSVIDVSK 766
            V  R DIGIKIK +R++L+ IA E+NQ+N ++  +  +P R++TSSVIDVS+
Sbjct: 113 QVLLRCDIGIKIKDIRKQLDAIANERNQFNFVSSSTIQQPHRRMTSSVIDVSQ 165


>ref|XP_002518080.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
           gi|223542676|gb|EEF44213.1| leucine-rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 940

 Score =  109 bits (273), Expect = 6e-22
 Identities = 66/174 (37%), Positives = 94/174 (54%), Gaps = 1/174 (0%)
 Frame = +2

Query: 251 MADALVFAVMEQLTSXXXXXXXXXXXXXXXXXQEIGKLSSALTMLQAVLDDXXXXXXXXX 430
           MADALV  V++QLTS                 +E+ KL++ALT ++AVL+D         
Sbjct: 1   MADALVSVVLQQLTSILQAEIQQEARLLFGGPEEVQKLTTALTAIRAVLNDAEKKQVKES 60

Query: 431 XXXLWLEKLKDVVYDADDVLDEWNTRTIISQIHGVDDDAVNGGIRNKVLSYLFSPCFRFK 610
              +WLE LK + YD DD+LDEWNT+    +I  +  D      +    S   SP F F 
Sbjct: 61  SVQVWLEGLKAISYDLDDLLDEWNTKIYRPKIERIRKDKSLFSKKMVCFSPYLSPLFCFN 120

Query: 611 DVGFRHDIGIKIKQVRERLNVIAEEKNQYNLIARQSSVRPRQL-TSSVIDVSKV 769
                HD+GIK+K ++ERL++IA EK +Y+      S  P +L T+ +IDVS+V
Sbjct: 121 QTVVHHDMGIKMKGIKERLDLIAIEKERYHFSLEGRSEEPERLETTPLIDVSEV 174


>ref|XP_002268266.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 932

 Score =  108 bits (271), Expect = 1e-21
 Identities = 63/173 (36%), Positives = 96/173 (55%)
 Frame = +2

Query: 251 MADALVFAVMEQLTSXXXXXXXXXXXXXXXXXQEIGKLSSALTMLQAVLDDXXXXXXXXX 430
           MA AL+  V+ +L S                  EI  L+  L  ++ VL+D         
Sbjct: 1   MAHALLSIVLTRLASVVEQQIRDELTLVLGVEAEIQSLTDTLRSVRDVLEDAERRQVKEK 60

Query: 431 XXXLWLEKLKDVVYDADDVLDEWNTRTIISQIHGVDDDAVNGGIRNKVLSYLFSPCFRFK 610
               WLE+LKD+ Y  DDVLDEW+T  +  Q+ G ++ +++   +NKV S + SPCF FK
Sbjct: 61  SVQGWLERLKDMAYQMDDVLDEWSTAILQLQMEGAENASMS---KNKVSSCIPSPCFCFK 117

Query: 611 DVGFRHDIGIKIKQVRERLNVIAEEKNQYNLIARQSSVRPRQLTSSVIDVSKV 769
            V  R DI +KIK ++++L+VIA E+ ++N I+  +    R +T+S IDVS+V
Sbjct: 118 QVASRRDIALKIKDLKQQLDVIASERTRFNFISSGTQEPQRLITTSAIDVSEV 170


>ref|XP_002268589.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 922

 Score =  106 bits (265), Expect = 5e-21
 Identities = 60/173 (34%), Positives = 95/173 (54%)
 Frame = +2

Query: 251 MADALVFAVMEQLTSXXXXXXXXXXXXXXXXXQEIGKLSSALTMLQAVLDDXXXXXXXXX 430
           MADAL+  V+E+L S                  EI  L+  L  ++ VL+D         
Sbjct: 1   MADALLSIVLERLASVVEQQIRDELTLVLGVEAEIQSLTDTLRSVRDVLEDAERRQVKEK 60

Query: 431 XXXLWLEKLKDVVYDADDVLDEWNTRTIISQIHGVDDDAVNGGIRNKVLSYLFSPCFRFK 610
               WLE+LKD+ Y  DDV+DEW+T  +  QI G +  +++   + KV S + SPCF  K
Sbjct: 61  AVQGWLERLKDMAYQMDDVVDEWSTAILQLQIKGAESASMS---KKKVSSCIPSPCFCLK 117

Query: 611 DVGFRHDIGIKIKQVRERLNVIAEEKNQYNLIARQSSVRPRQLTSSVIDVSKV 769
            V  R DI +K+K ++++L+VIA +++Q+N I+  S    R +T+S +D+ +V
Sbjct: 118 QVASRRDIALKVKSIKQQLDVIASQRSQFNFISSLSEEPQRFITTSQLDIPEV 170


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