BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012805
         (664 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]   135   9e-30
emb|CBI32919.3| unnamed protein product [Vitis vinifera]              128   9e-28
ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...   120   2e-25
ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thalia...   111   1e-22
ref|NP_567422.1| F-box/LRR-repeat protein [Arabidopsis thaliana]...   111   1e-22

>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score =  135 bits (339), Expect = 9e-30
 Identities = 83/198 (41%), Positives = 114/198 (57%), Gaps = 2/198 (1%)
 Frame = -2

Query: 597 GQNSGEHEDRINRLPDTMLTYIISFLPTKNAVGTSVLAKRWKNLWASVPVLDFDDTLIL- 421
           G    E  D I+ LPD +L +I+SFLPTK AVGTS+L+KRW+ LWASVP+LDFDD L L 
Sbjct: 2   GSEYEESRDIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLN 61

Query: 420 -XXXXXXXXXXXKFMNFVDRVLHLHDLPNIQKFSLKCLDTRDASRIDSWITTALKHRVEE 244
                        F NFVD VL   ++  I+KF L   D  +   + SWI  AL+ RV+E
Sbjct: 62  PSTLVELEERIIMFQNFVDGVLRHSEVSCIKKFRLGYRD-NNLDSVYSWICIALERRVQE 120

Query: 243 IFLNLKLDNACLLPSSFFICESLKTLKITGDFYEDVDYIYKIPSCIRWSSLKFLNLDSLR 64
           + L+L +D    LP  FFIC++L  +K++   + D      IP+ +   SLK L+L S+ 
Sbjct: 121 LDLHLLIDWRVELPPMFFICKTLVVVKLSCALFLD------IPTTVWLPSLKALHLKSVE 174

Query: 63  LFSDRSTHQVSLCCPILE 10
              D S  ++   CP+LE
Sbjct: 175 YSDDDSIQKLLSGCPVLE 192


>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score =  128 bits (322), Expect = 9e-28
 Identities = 70/144 (48%), Positives = 90/144 (62%), Gaps = 2/144 (1%)
 Frame = -2

Query: 585 GEHEDRINRLPDTMLTYIISFLPTKNAVGTSVLAKRWKNLWASVPVLDFDDTLIL--XXX 412
           G+  DRI+ LPD +L +IISFLPTK AVGTSVL+KRW+ LWAS+P LDFDD L+L     
Sbjct: 6   GKSRDRISNLPDAVLCHIISFLPTKFAVGTSVLSKRWRYLWASIPNLDFDDDLLLDRDKP 65

Query: 411 XXXXXXXXKFMNFVDRVLHLHDLPNIQKFSLKCLDTRDASRIDSWITTALKHRVEEIFLN 232
                    F NFVD+VL    +  I+KF LKC D    S ++SWI TAL+  V+E+ L 
Sbjct: 66  IGDSERSICFKNFVDKVLLHGSISCIRKFRLKCSDHELDSAVNSWICTALERNVQELDLY 125

Query: 231 LKLDNACLLPSSFFICESLKTLKI 160
              +    LP  FF C++L  LK+
Sbjct: 126 FDTEYPIELPPKFFFCKTLVVLKL 149


>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score =  120 bits (301), Expect = 2e-25
 Identities = 76/206 (36%), Positives = 110/206 (53%), Gaps = 1/206 (0%)
 Frame = -2

Query: 648 MDASSSVPTSKKRKLGEGQNSGEHEDRINRLPDTMLTYIISFLPTKNAVGTSVLAKRWKN 469
           M A S    +K++KL   + +   E  I  LPD +L +I+SFL T+ AV TS+L+K+W +
Sbjct: 1   MKAKSLTRKTKRKKLKAEKETDSGEKSIGNLPDALLEHILSFLSTEAAVRTSILSKKWLH 60

Query: 468 LWASVPVLDFDDTLILXXXXXXXXXXXKFMNFVDRVLHLHDLPNIQKFSLKCLDTRDASR 289
           LW S   L F                  FM+FVDRVL L    NI +F L C    D SR
Sbjct: 61  LWKSTTNLTF--------FGLKSPKRKLFMDFVDRVLALRGPSNIVQFYLSCEVKDDPSR 112

Query: 288 IDSWITTALKHRVEEIFLNLK-LDNACLLPSSFFICESLKTLKITGDFYEDVDYIYKIPS 112
           + +WI+ A+   V++++L L+  + + +LP   F CE+L  L+I      ++ YI K+PS
Sbjct: 113 VGTWISAAVNRNVKDLYLELRDFEASFVLPHCLFNCETLTELEI------NMPYILKLPS 166

Query: 111 CIRWSSLKFLNLDSLRLFSDRSTHQV 34
            I  S LK LNL  +    D ST Q+
Sbjct: 167 SISLSCLKILNLYEVIFTDDHSTQQL 192


>ref|NP_001190724.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|332657973|gb|AEE83373.1| F-box/LRR-repeat protein
           [Arabidopsis thaliana]
          Length = 443

 Score =  111 bits (278), Expect = 1e-22
 Identities = 72/190 (37%), Positives = 103/190 (54%), Gaps = 2/190 (1%)
 Frame = -2

Query: 573 DRINRLPDTMLTYIISFLPTKNAVGTSVLAKRWKNLWASVPVLDFDDTLILXXXXXXXXX 394
           D I+ LPD + ++I+SFLPTK A  TSVL+K+W+ L+A VP LD DD++ L         
Sbjct: 8   DVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPENETEIS 67

Query: 393 XXKFMNFVDRVLHLHDLPNIQKFSLKCLDTRDASRIDSWITTALKHRVEEIFLNLKLDNA 214
              FM+FVDRVL L     + KFSLK  D  D  RI  WI   L+  V ++ L+L L++ 
Sbjct: 68  TS-FMDFVDRVLALQGNSPLHKFSLKIGDGIDPVRIIPWINNVLERGVSDLDLHLNLESE 126

Query: 213 CLLPSSFFICESLKTLKITGDFYEDVDYIYKIPSCIRWSSLKFLNLDSLRLFSDRSTHQV 34
            LLPS  ++C++L  LK+    Y  +D        +    LK L +++   F +      
Sbjct: 127 FLLPSQVYLCKTLVWLKLRFGLYPTIDV-----EDVHLPKLKTLYIEATH-FEEHGVGLT 180

Query: 33  SLC--CPILE 10
            L   CP+LE
Sbjct: 181 KLLSGCPMLE 190


>ref|NP_567422.1| F-box/LRR-repeat protein [Arabidopsis thaliana]
           gi|75245750|sp|Q8L7H1.1|FBL75_ARATH RecName:
           Full=F-box/LRR-repeat protein At4g14103
           gi|22136642|gb|AAM91640.1| unknown protein [Arabidopsis
           thaliana] gi|332657972|gb|AEE83372.1| F-box/LRR-repeat
           protein [Arabidopsis thaliana]
          Length = 381

 Score =  111 bits (278), Expect = 1e-22
 Identities = 72/190 (37%), Positives = 103/190 (54%), Gaps = 2/190 (1%)
 Frame = -2

Query: 573 DRINRLPDTMLTYIISFLPTKNAVGTSVLAKRWKNLWASVPVLDFDDTLILXXXXXXXXX 394
           D I+ LPD + ++I+SFLPTK A  TSVL+K+W+ L+A VP LD DD++ L         
Sbjct: 8   DVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPENETEIS 67

Query: 393 XXKFMNFVDRVLHLHDLPNIQKFSLKCLDTRDASRIDSWITTALKHRVEEIFLNLKLDNA 214
              FM+FVDRVL L     + KFSLK  D  D  RI  WI   L+  V ++ L+L L++ 
Sbjct: 68  TS-FMDFVDRVLALQGNSPLHKFSLKIGDGIDPVRIIPWINNVLERGVSDLDLHLNLESE 126

Query: 213 CLLPSSFFICESLKTLKITGDFYEDVDYIYKIPSCIRWSSLKFLNLDSLRLFSDRSTHQV 34
            LLPS  ++C++L  LK+    Y  +D        +    LK L +++   F +      
Sbjct: 127 FLLPSQVYLCKTLVWLKLRFGLYPTIDV-----EDVHLPKLKTLYIEATH-FEEHGVGLT 180

Query: 33  SLC--CPILE 10
            L   CP+LE
Sbjct: 181 KLLSGCPMLE 190