BLASTX nr result

ID: Coptis24_contig00012802 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012802
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269925.1| PREDICTED: mitochondrial intermembrane space...   174   9e-42
ref|XP_002316429.1| predicted protein [Populus trichocarpa] gi|1...   169   2e-40
ref|XP_004163217.1| PREDICTED: mitochondrial intermembrane space...   160   1e-37
ref|XP_004150196.1| PREDICTED: mitochondrial intermembrane space...   157   1e-36
ref|XP_002513150.1| Intermembrane space import and assembly prot...   152   2e-35

>ref|XP_002269925.1| PREDICTED: mitochondrial intermembrane space import and assembly
           protein 40 [Vitis vinifera] gi|147853097|emb|CAN78563.1|
           hypothetical protein VITISV_010402 [Vitis vinifera]
           gi|297742718|emb|CBI35352.3| unnamed protein product
           [Vitis vinifera]
          Length = 141

 Score =  174 bits (440), Expect = 9e-42
 Identities = 85/126 (67%), Positives = 99/126 (78%), Gaps = 1/126 (0%)
 Frame = -2

Query: 377 SSE*SKQKAQQPHSMEALIAEATAFGDSETESLDAKIEKALECPCVAPLRSGPCGTPFID 198
           SS  +  +++   S++ALIAEA AFGD E ESLDAK +KALECPC+A LRSGPCGT F +
Sbjct: 9   SSAPNNSQSRPSDSLDALIAEAAAFGDDENESLDAKAQKALECPCIAHLRSGPCGTQFSE 68

Query: 197 AFRCFLKSTAEEKGSDCVHPFVGLQNCIKLNPDAFSKDVA-DSVESKKEEKKTGEYKISP 21
           AF CFLKS+AEEKGSDCVHPFV LQNCIK NP+AFSKD+  D  E KKEE+ T EYKI P
Sbjct: 69  AFVCFLKSSAEEKGSDCVHPFVALQNCIKANPNAFSKDILDDDDEVKKEEEPTQEYKIIP 128

Query: 20  PTWSTE 3
           P W+ E
Sbjct: 129 PIWAAE 134


>ref|XP_002316429.1| predicted protein [Populus trichocarpa] gi|118481972|gb|ABK92917.1|
           unknown [Populus trichocarpa]
           gi|222865469|gb|EEF02600.1| predicted protein [Populus
           trichocarpa]
          Length = 145

 Score =  169 bits (428), Expect = 2e-40
 Identities = 78/120 (65%), Positives = 94/120 (78%), Gaps = 5/120 (4%)
 Frame = -2

Query: 347 QPH-----SMEALIAEATAFGDSETESLDAKIEKALECPCVAPLRSGPCGTPFIDAFRCF 183
           +PH     SME+L+AEA A+G+ E ESL+AK +KALECPC+A LR+GPCG  F ++F CF
Sbjct: 18  EPHFSSSPSMESLLAEAVAYGNDENESLEAKAQKALECPCIADLRNGPCGVQFSESFLCF 77

Query: 182 LKSTAEEKGSDCVHPFVGLQNCIKLNPDAFSKDVADSVESKKEEKKTGEYKISPPTWSTE 3
           LKST+EEKGSDCVHPFV LQNCIK NP+AFSKD+ +  E KKEE+   EYKI PP WS E
Sbjct: 78  LKSTSEEKGSDCVHPFVALQNCIKANPNAFSKDILEEAEEKKEEEPAQEYKIIPPIWSRE 137


>ref|XP_004163217.1| PREDICTED: mitochondrial intermembrane space import and assembly
           protein 40-like [Cucumis sativus]
          Length = 159

 Score =  160 bits (404), Expect = 1e-37
 Identities = 77/122 (63%), Positives = 90/122 (73%), Gaps = 8/122 (6%)
 Frame = -2

Query: 344 PHSMEALIAEATAFGDSETESLDAKIEKALECPCVAPLRSGPCGTPFIDAFRCFLKSTAE 165
           P SME+LIAEA A+G+   ESLDAK  +ALECPC+A LR GPCG  F DAF CF KSTAE
Sbjct: 30  PPSMESLIAEAEAYGNETNESLDAKANRALECPCIADLRKGPCGIQFSDAFLCFFKSTAE 89

Query: 164 EKGSDCVHPFVGLQNCIKLNPDAFSKDVADSVESKKE--------EKKTGEYKISPPTWS 9
           EKGSDCVHPFV LQ+CIK NP+AFSKDV D  E +KE        E+ T +Y++ PP+WS
Sbjct: 90  EKGSDCVHPFVALQSCIKANPNAFSKDVLDEDEEEKEMEKEKVKTEEPTQDYRVIPPSWS 149

Query: 8   TE 3
            E
Sbjct: 150 RE 151


>ref|XP_004150196.1| PREDICTED: mitochondrial intermembrane space import and assembly
           protein 40-like [Cucumis sativus]
          Length = 159

 Score =  157 bits (396), Expect = 1e-36
 Identities = 76/122 (62%), Positives = 89/122 (72%), Gaps = 8/122 (6%)
 Frame = -2

Query: 344 PHSMEALIAEATAFGDSETESLDAKIEKALECPCVAPLRSGPCGTPFIDAFRCFLKSTAE 165
           P SME+LIAEA A+G+   ESLDAK  +ALECPC+A LR G CG  F DAF CF KSTAE
Sbjct: 30  PPSMESLIAEAEAYGNETNESLDAKANRALECPCIADLRKGSCGIQFSDAFLCFFKSTAE 89

Query: 164 EKGSDCVHPFVGLQNCIKLNPDAFSKDVADSVESKKE--------EKKTGEYKISPPTWS 9
           EKGSDCVHPFV LQ+CIK NP+AFSKDV D  E +KE        E+ T +Y++ PP+WS
Sbjct: 90  EKGSDCVHPFVALQSCIKANPNAFSKDVLDEDEEEKEMEKEKVKTEEPTQDYRVVPPSWS 149

Query: 8   TE 3
            E
Sbjct: 150 RE 151


>ref|XP_002513150.1| Intermembrane space import and assembly protein 40, mitochondrial
           precursor, putative [Ricinus communis]
           gi|223548161|gb|EEF49653.1| Intermembrane space import
           and assembly protein 40, mitochondrial precursor,
           putative [Ricinus communis]
          Length = 135

 Score =  152 bits (385), Expect = 2e-35
 Identities = 71/110 (64%), Positives = 87/110 (79%)
 Frame = -2

Query: 338 SMEALIAEATAFGDSETESLDAKIEKALECPCVAPLRSGPCGTPFIDAFRCFLKSTAEEK 159
           S+E+LIAEA A+G+ E ESLDAK +KALECPC+A LR G CG  F +AF CFLKSTAEEK
Sbjct: 24  SVESLIAEAAAYGNDENESLDAKAQKALECPCIADLRKGSCGIQFSEAFVCFLKSTAEEK 83

Query: 158 GSDCVHPFVGLQNCIKLNPDAFSKDVADSVESKKEEKKTGEYKISPPTWS 9
           GSDCVHPFV LQ+C+K NP+AFS D+ +  E +KEE +  +YK+ PP WS
Sbjct: 84  GSDCVHPFVALQDCLKANPEAFSNDILEQ-EVEKEEVEAKDYKMFPPAWS 132


Top