BLASTX nr result

ID: Coptis24_contig00012801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012801
         (474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280640.2| PREDICTED: cellulose synthase-like protein G...   188   3e-46
emb|CBI26389.3| unnamed protein product [Vitis vinifera]              188   3e-46
emb|CAN70913.1| hypothetical protein VITISV_002996 [Vitis vinifera]   185   3e-45
ref|XP_002280696.2| PREDICTED: cellulose synthase-like protein G...   184   6e-45
ref|XP_002280659.2| PREDICTED: cellulose synthase A catalytic su...   183   1e-44

>ref|XP_002280640.2| PREDICTED: cellulose synthase-like protein G2-like [Vitis vinifera]
          Length = 678

 Score =  188 bits (478), Expect = 3e-46
 Identities = 92/159 (57%), Positives = 115/159 (72%), Gaps = 2/159 (1%)
 Frame = +3

Query: 3   ETKLPLHVSQRQQPQTTIYRFNTLVHSIALIALLCYRFSSLLHGQFNE--FMAIVSWIII 176
           E  LP H+   Q+    I+RF+ L+HS ALIAL+ YR S LL           I+ W+++
Sbjct: 2   EGSLPRHLCHVQKSSAIIHRFHALIHSTALIALIYYRASFLLQNNDTRSGHTPIIPWLLV 61

Query: 177 SFSELLHSFLWVLGQAVRWRPITRHVFAERLPRDSELPAIDVFICTADPTKEPTVGVMNT 356
              EL+ SF+W+L QA RWRP+TR VF ERLP D +LP+IDVFICT DP KEPT+ VMNT
Sbjct: 62  FAGELVLSFIWLLEQAFRWRPVTRAVFPERLPEDKQLPSIDVFICTVDPKKEPTLEVMNT 121

Query: 357 VISAMCLDYPPDKLFVYLSDDGGAPITLYGMKEAYSFAK 473
           VISAM LDYPP+KL VY+SDDGG+ +TLYGMKEA+ FA+
Sbjct: 122 VISAMALDYPPEKLHVYVSDDGGSSLTLYGMKEAWEFAR 160


>emb|CBI26389.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  188 bits (478), Expect = 3e-46
 Identities = 92/159 (57%), Positives = 115/159 (72%), Gaps = 2/159 (1%)
 Frame = +3

Query: 3   ETKLPLHVSQRQQPQTTIYRFNTLVHSIALIALLCYRFSSLLHGQFNE--FMAIVSWIII 176
           E  LP H+   Q+    I+RF+ L+HS ALIAL+ YR S LL           I+ W+++
Sbjct: 51  EGSLPRHLCHVQKSSAIIHRFHALIHSTALIALIYYRASFLLQNNDTRSGHTPIIPWLLV 110

Query: 177 SFSELLHSFLWVLGQAVRWRPITRHVFAERLPRDSELPAIDVFICTADPTKEPTVGVMNT 356
              EL+ SF+W+L QA RWRP+TR VF ERLP D +LP+IDVFICT DP KEPT+ VMNT
Sbjct: 111 FAGELVLSFIWLLEQAFRWRPVTRAVFPERLPEDKQLPSIDVFICTVDPKKEPTLEVMNT 170

Query: 357 VISAMCLDYPPDKLFVYLSDDGGAPITLYGMKEAYSFAK 473
           VISAM LDYPP+KL VY+SDDGG+ +TLYGMKEA+ FA+
Sbjct: 171 VISAMALDYPPEKLHVYVSDDGGSSLTLYGMKEAWEFAR 209


>emb|CAN70913.1| hypothetical protein VITISV_002996 [Vitis vinifera]
          Length = 643

 Score =  185 bits (470), Expect = 3e-45
 Identities = 91/159 (57%), Positives = 113/159 (71%), Gaps = 2/159 (1%)
 Frame = +3

Query: 3   ETKLPLHVSQRQQPQTTIYRFNTLVHSIALIALLCYRFSSLLHGQFNE--FMAIVSWIII 176
           E  LP H+   Q+    I RF+ L+HS ALIAL+ YR S LL           I+ W+++
Sbjct: 2   EGSLPRHLCHVQKSSAIINRFHALIHSTALIALIYYRASFLLQNNDTRSGHTPIIPWLLV 61

Query: 177 SFSELLHSFLWVLGQAVRWRPITRHVFAERLPRDSELPAIDVFICTADPTKEPTVGVMNT 356
              EL+ SF+W+L QA RWRP+TR VF ERLP D +LP+ID FICT DP KEPT+ VMNT
Sbjct: 62  FAGELVLSFIWLLDQAFRWRPVTRAVFPERLPEDKQLPSIDXFICTVDPKKEPTLEVMNT 121

Query: 357 VISAMCLDYPPDKLFVYLSDDGGAPITLYGMKEAYSFAK 473
           VISAM LDYPP+KL VY+SDDGG+ +TLYGMKEA+ FA+
Sbjct: 122 VISAMALDYPPEKLHVYVSDDGGSSLTLYGMKEAWEFAR 160


>ref|XP_002280696.2| PREDICTED: cellulose synthase-like protein G2-like [Vitis vinifera]
          Length = 733

 Score =  184 bits (467), Expect = 6e-45
 Identities = 90/158 (56%), Positives = 116/158 (73%), Gaps = 1/158 (0%)
 Frame = +3

Query: 3   ETKLPLHVSQRQQPQTTIYRFNTLVHSIALIALLCYRFSSLLHGQFNEFMAIVS-WIIIS 179
           ++ LPL +   ++    I R+ TL+HS AL+AL+ YR S L     N      S W+++ 
Sbjct: 2   DSSLPLQLCYVRKSTAIINRWYTLIHSTALMALVYYRASFLFQNPENRAHTPTSPWLLVF 61

Query: 180 FSELLHSFLWVLGQAVRWRPITRHVFAERLPRDSELPAIDVFICTADPTKEPTVGVMNTV 359
             EL+ SF+W+LGQA RWRP+TR +F ERLP D  LPAIDVFICTADP +EPT GVMNTV
Sbjct: 62  AGELILSFIWLLGQAYRWRPVTRTLFPERLPEDKHLPAIDVFICTADPKREPTFGVMNTV 121

Query: 360 ISAMCLDYPPDKLFVYLSDDGGAPITLYGMKEAYSFAK 473
           ISAM LDYPP++L VY+SDDGG+ +TLYGMKEA++FA+
Sbjct: 122 ISAMALDYPPERLHVYVSDDGGSSLTLYGMKEAWAFAR 159


>ref|XP_002280659.2| PREDICTED: cellulose synthase A catalytic subunit 4
           [UDP-forming]-like, partial [Vitis vinifera]
          Length = 550

 Score =  183 bits (465), Expect = 1e-44
 Identities = 91/159 (57%), Positives = 113/159 (71%), Gaps = 2/159 (1%)
 Frame = +3

Query: 3   ETKLPLHVSQRQQPQTTIYRFNTLVHSIALIALLCYRFSSLLHGQ--FNEFMAIVSWIII 176
           E  LP H+   Q+    I RF+ L+HS ALIAL+ YR S LL      +    I+ W+++
Sbjct: 2   EGSLPRHLCHVQKSSAIINRFHALIHSTALIALIYYRASFLLQNTDTISGHTPIIPWLLV 61

Query: 177 SFSELLHSFLWVLGQAVRWRPITRHVFAERLPRDSELPAIDVFICTADPTKEPTVGVMNT 356
              EL+ SF+W+L QA RWRP+TR VF ERLP D +LP IDVFICT DP KEPT+ VMNT
Sbjct: 62  FAGELVLSFIWLLEQAFRWRPVTRSVFPERLPEDKQLPPIDVFICTVDPKKEPTLEVMNT 121

Query: 357 VISAMCLDYPPDKLFVYLSDDGGAPITLYGMKEAYSFAK 473
           VISAM LDY P+KL VY+SDDGG+ +TLYGMKEA+ FA+
Sbjct: 122 VISAMALDYRPEKLHVYVSDDGGSSLTLYGMKEAWEFAR 160


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