BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012785
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    75   4e-12
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    75   7e-12
ref|XP_002278304.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    68   9e-10
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    67   2e-09
ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycin...    66   3e-09

>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 49/136 (36%), Positives = 70/136 (51%), Gaps = 22/136 (16%)
 Frame = -2

Query: 490 SMPTTSLVASSNKFVSSRDSFYLVATSSDLLKVTRTL----------LDDFHATQHFLVQ 341
           S P  S++    +F    D  YLV +  +LL VTR L              + T  F V 
Sbjct: 236 SSPRVSIIEMPQQF--GGDLQYLVESGEELLLVTRYLDLTYDVEPDQTSLIYRTTRFQVC 293

Query: 340 KLDFAGTKWLEVESLSNCALFVGVNVSFSVVASDFPGCKENCIYF--------FTG---- 197
           +LD    +W  V SL + ALF+G N+S S+ + DFPGCK NCIY+        + G    
Sbjct: 294 RLDLKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGE 353

Query: 196 EDKGVFNLQDGTIQTI 149
           +D G+FNL+DG+I+ +
Sbjct: 354 QDLGIFNLEDGSIEPL 369


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 49/136 (36%), Positives = 70/136 (51%), Gaps = 22/136 (16%)
 Frame = -2

Query: 490 SMPTTSLVASSNKFVSSRDSFYLVATSSDLLKVTRTL----------LDDFHATQHFLVQ 341
           S P  S++    +F    D  YLV +  +LL VTR L              + T  F V 
Sbjct: 236 SSPRVSIIEMPQQF--GGDLQYLVESGEELLLVTRYLDLTYDVEXDQTSLIYRTTRFQVC 293

Query: 340 KLDFAGTKWLEVESLSNCALFVGVNVSFSVVASDFPGCKENCIYF--------FTG---- 197
           +LD    +W  V SL + ALF+G N+S S+ + DFPGCK NCIY+        + G    
Sbjct: 294 RLDSKAPRWEVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGE 353

Query: 196 EDKGVFNLQDGTIQTI 149
           +D G+FNL+DG+I+ +
Sbjct: 354 QDLGIFNLEDGSIEPL 369


>ref|XP_002278304.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 394

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 49/127 (38%), Positives = 63/127 (49%), Gaps = 16/127 (12%)
 Frame = -2

Query: 490 SMPTTSLVASSNKFVSSRDSFYLVATSSDLLKVTRTLLDDFHATQ----HFLVQKLDFAG 323
           S P  SL+A S   V   D   LV ++ +LL V        H        F V KLD  G
Sbjct: 225 SPPVLSLIADS---VFGGDKKSLVESNGELLMVDTYFGQGIHRRMKRAVRFKVFKLDQIG 281

Query: 322 TKWLEVESLSNCALFVGVNVSFSVVASDFPGCKENCIY----FFTGEDKG--------VF 179
             W+EVESL N  LF+G   +FS VAS+F GC+ NCIY    FF    +G        +F
Sbjct: 282 HMWVEVESLGNRILFLGEKSTFSAVASEFCGCEGNCIYYTNTFFCPNGQGDNAYTAIDIF 341

Query: 178 NLQDGTI 158
           NL++G +
Sbjct: 342 NLENGNM 348


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 43/120 (35%), Positives = 61/120 (50%), Gaps = 24/120 (20%)
 Frame = -2

Query: 436 DSFYLVATSSDLLKVTRTLLDDF------------HATQHFLVQKLDFAGTKWLEVESLS 293
           D  YLV +  +LL VTR L  ++            + T  F V +LD+ G +WL + +L 
Sbjct: 255 DMQYLVNSGDELLLVTRYLDLEYEFDHPDMEPHLIYRTIRFEVFRLDWNGPQWLRMSTLG 314

Query: 292 NCALFVGVNVSFSVVASDFPGCKENCIYF------------FTGEDKGVFNLQDGTIQTI 149
           + ALF+G N S S+ A+DF GC  NCIY+            F   D G+F L D TI+ +
Sbjct: 315 DKALFIGENSSLSLSATDFSGCMGNCIYYTDDYLDANYDGHFGDHDLGIFKLCDETIEPL 374


>ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycine max]
          Length = 393

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 45/140 (32%), Positives = 65/140 (46%), Gaps = 23/140 (16%)
 Frame = -2

Query: 499 DGYSMPTTSLVASSNKFVSSRDSFYLVATSSDLLKVTRTLLDDF-----------HATQH 353
           +G   P  S++ ++  F  + D  Y V ++ D+L + R L  DF           + T  
Sbjct: 230 EGCFPPRVSIIQTTTPFGFAGDIHYAVFSAGDMLLLIRVLDQDFSDHAGEESDLVYRTVG 289

Query: 352 FLVQKLDFAGTKWLEVESLSNCALFVGVNVSFSVVASDFPGCKENCIYFFTG-------- 197
           F V K+++    W  VE+L    LFVG N S S  ASDF GC  +CIYF           
Sbjct: 290 FEVFKMNWGLLTWQRVETLGERVLFVGGNSSLSFCASDFVGCSADCIYFTDDYSESNDDD 349

Query: 196 ----EDKGVFNLQDGTIQTI 149
                D GVF L+D +I+ +
Sbjct: 350 ACGKHDLGVFRLRDKSIEPL 369