BLASTX nr result

ID: Coptis24_contig00012781 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012781
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19480.3| unnamed protein product [Vitis vinifera]               65   6e-09
ref|XP_002284966.1| PREDICTED: probable WRKY transcription facto...    65   6e-09
ref|XP_002279073.2| PREDICTED: uncharacterized protein LOC100247...    53   2e-08
emb|CBI27037.3| unnamed protein product [Vitis vinifera]               53   2e-08
emb|CAN68345.1| hypothetical protein VITISV_004019 [Vitis vinifera]    53   6e-08

>emb|CBI19480.3| unnamed protein product [Vitis vinifera]
          Length = 319

 Score = 65.5 bits (158), Expect = 6e-09
 Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 6/84 (7%)
 Frame = +3

Query: 18  Y*KDAFTSNMEENTIEEATSPTHQGTDNLIVL------QDHPNTSVETEMDREVASDVAI 179
           Y  D+F + ME+N ++EA S   Q  + L+ L      Q    TS+E ++D    +D+A+
Sbjct: 9   YANDSFAAKMEDNALQEAASAGIQSVEKLVKLLSQCQQQKQTTTSLEIDIDCTAVADMAV 68

Query: 180 NEFKRVNSLLG*TRKGHARFIRAP 251
            +FKRV SLL  TR GHARF RAP
Sbjct: 69  TKFKRVISLLDRTRTGHARFRRAP 92


>ref|XP_002284966.1| PREDICTED: probable WRKY transcription factor 7 [Vitis vinifera]
          Length = 347

 Score = 65.5 bits (158), Expect = 6e-09
 Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 6/84 (7%)
 Frame = +3

Query: 18  Y*KDAFTSNMEENTIEEATSPTHQGTDNLIVL------QDHPNTSVETEMDREVASDVAI 179
           Y  D+F + ME+N ++EA S   Q  + L+ L      Q    TS+E ++D    +D+A+
Sbjct: 9   YANDSFAAKMEDNALQEAASAGIQSVEKLVKLLSQCQQQKQTTTSLEIDIDCTAVADMAV 68

Query: 180 NEFKRVNSLLG*TRKGHARFIRAP 251
            +FKRV SLL  TR GHARF RAP
Sbjct: 69  TKFKRVISLLDRTRTGHARFRRAP 92


>ref|XP_002279073.2| PREDICTED: uncharacterized protein LOC100247382 [Vitis vinifera]
          Length = 1119

 Score = 53.1 bits (126), Expect(2) = 2e-08
 Identities = 25/29 (86%), Positives = 26/29 (89%)
 Frame = +2

Query: 497 TVVHAKDLRVGKGEPEEVAIKIIRNNDTM 583
           TVV AKDL+ G GEPEEVAIKIIRNNDTM
Sbjct: 814 TVVRAKDLKAGNGEPEEVAIKIIRNNDTM 842



 Score = 30.4 bits (67), Expect(2) = 2e-08
 Identities = 11/14 (78%), Positives = 14/14 (100%)
 Frame = +1

Query: 451 SYRFGEVLDGRYEV 492
           S+RFGE+LDGRYE+
Sbjct: 790 SHRFGEILDGRYEI 803


>emb|CBI27037.3| unnamed protein product [Vitis vinifera]
          Length = 998

 Score = 53.1 bits (126), Expect(2) = 2e-08
 Identities = 25/29 (86%), Positives = 26/29 (89%)
 Frame = +2

Query: 497 TVVHAKDLRVGKGEPEEVAIKIIRNNDTM 583
           TVV AKDL+ G GEPEEVAIKIIRNNDTM
Sbjct: 693 TVVRAKDLKAGNGEPEEVAIKIIRNNDTM 721



 Score = 30.4 bits (67), Expect(2) = 2e-08
 Identities = 11/14 (78%), Positives = 14/14 (100%)
 Frame = +1

Query: 451 SYRFGEVLDGRYEV 492
           S+RFGE+LDGRYE+
Sbjct: 669 SHRFGEILDGRYEI 682


>emb|CAN68345.1| hypothetical protein VITISV_004019 [Vitis vinifera]
          Length = 1121

 Score = 53.1 bits (126), Expect(2) = 6e-08
 Identities = 25/29 (86%), Positives = 26/29 (89%)
 Frame = +2

Query: 497 TVVHAKDLRVGKGEPEEVAIKIIRNNDTM 583
           TVV AKDL+ G GEPEEVAIKIIRNNDTM
Sbjct: 804 TVVRAKDLKAGNGEPEEVAIKIIRNNDTM 832



 Score = 28.9 bits (63), Expect(2) = 6e-08
 Identities = 10/13 (76%), Positives = 13/13 (100%)
 Frame = +1

Query: 454 YRFGEVLDGRYEV 492
           +RFGE+LDGRYE+
Sbjct: 781 HRFGEILDGRYEI 793


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