BLASTX nr result
ID: Coptis24_contig00012773
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00012773
(213 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004173717.1| PREDICTED: polyubiquitin-like, partial [Cucu... 139 2e-31
emb|CCO66297.1| polyubiquitin [Bathycoccus prasinos] 139 2e-31
ref|XP_003608276.1| Ubiquitin [Medicago truncatula] gi|355509331... 139 2e-31
gb|ABD61727.1| polyubiquitin [Lupinus albus] 139 2e-31
gb|AAC35858.1| polyubiquitin [Capsicum chinense] 139 2e-31
>ref|XP_004173717.1| PREDICTED: polyubiquitin-like, partial [Cucumis sativus]
Length = 126
Score = 139 bits (351), Expect = 2e-31
Identities = 70/70 (100%), Positives = 70/70 (100%)
Frame = +2
Query: 2 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 181
HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 41 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 100
Query: 182 DGRTLADYNI 211
DGRTLADYNI
Sbjct: 101 DGRTLADYNI 110
Score = 65.9 bits (159), Expect = 3e-09
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = +2
Query: 119 QDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 211
+DKEGIPPDQQRLIFAGKQLEDGRTLADYNI
Sbjct: 4 EDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 34
>emb|CCO66297.1| polyubiquitin [Bathycoccus prasinos]
Length = 359
Score = 139 bits (351), Expect = 2e-31
Identities = 70/70 (100%), Positives = 70/70 (100%)
Frame = +2
Query: 2 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 181
HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 119 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 178
Query: 182 DGRTLADYNI 211
DGRTLADYNI
Sbjct: 179 DGRTLADYNI 188
Score = 139 bits (351), Expect = 2e-31
Identities = 70/70 (100%), Positives = 70/70 (100%)
Frame = +2
Query: 2 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 181
HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 195 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 254
Query: 182 DGRTLADYNI 211
DGRTLADYNI
Sbjct: 255 DGRTLADYNI 264
Score = 139 bits (351), Expect = 2e-31
Identities = 70/70 (100%), Positives = 70/70 (100%)
Frame = +2
Query: 2 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 181
HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 271 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 330
Query: 182 DGRTLADYNI 211
DGRTLADYNI
Sbjct: 331 DGRTLADYNI 340
Score = 98.2 bits (243), Expect = 6e-19
Identities = 61/112 (54%), Positives = 61/112 (54%), Gaps = 51/112 (45%)
Frame = +2
Query: 29 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE-------------------------- 130
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGTFRVKSRRLKFCLLALLDSATTIES 60
Query: 131 -------------------------GIPPDQQRLIFAGKQLEDGRTLADYNI 211
GIPPDQQRLIFAGKQLEDGRTLADYNI
Sbjct: 61 SLALRSKKSSERREREKESALSRARGIPPDQQRLIFAGKQLEDGRTLADYNI 112
>ref|XP_003608276.1| Ubiquitin [Medicago truncatula] gi|355509331|gb|AES90473.1|
Ubiquitin [Medicago truncatula]
Length = 533
Score = 139 bits (351), Expect = 2e-31
Identities = 70/70 (100%), Positives = 70/70 (100%)
Frame = +2
Query: 2 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 181
HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 68 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 127
Query: 182 DGRTLADYNI 211
DGRTLADYNI
Sbjct: 128 DGRTLADYNI 137
Score = 139 bits (351), Expect = 2e-31
Identities = 70/70 (100%), Positives = 70/70 (100%)
Frame = +2
Query: 2 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 181
HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 144 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 203
Query: 182 DGRTLADYNI 211
DGRTLADYNI
Sbjct: 204 DGRTLADYNI 213
Score = 139 bits (351), Expect = 2e-31
Identities = 70/70 (100%), Positives = 70/70 (100%)
Frame = +2
Query: 2 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 181
HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 220 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 279
Query: 182 DGRTLADYNI 211
DGRTLADYNI
Sbjct: 280 DGRTLADYNI 289
Score = 139 bits (351), Expect = 2e-31
Identities = 70/70 (100%), Positives = 70/70 (100%)
Frame = +2
Query: 2 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 181
HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 372 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 431
Query: 182 DGRTLADYNI 211
DGRTLADYNI
Sbjct: 432 DGRTLADYNI 441
Score = 139 bits (351), Expect = 2e-31
Identities = 70/70 (100%), Positives = 70/70 (100%)
Frame = +2
Query: 2 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 181
HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 448 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 507
Query: 182 DGRTLADYNI 211
DGRTLADYNI
Sbjct: 508 DGRTLADYNI 517
Score = 135 bits (341), Expect = 3e-30
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = +2
Query: 2 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 181
HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKI DKEGIPPDQQRLIFAGKQLE
Sbjct: 296 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKILDKEGIPPDQQRLIFAGKQLE 355
Query: 182 DGRTLADYNI 211
DGRTL+DYNI
Sbjct: 356 DGRTLSDYNI 365
Score = 122 bits (305), Expect = 4e-26
Identities = 61/61 (100%), Positives = 61/61 (100%)
Frame = +2
Query: 29 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 208
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 209 I 211
I
Sbjct: 61 I 61
>gb|ABD61727.1| polyubiquitin [Lupinus albus]
Length = 132
Score = 139 bits (351), Expect = 2e-31
Identities = 70/70 (100%), Positives = 70/70 (100%)
Frame = +2
Query: 2 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 181
HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 26 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 85
Query: 182 DGRTLADYNI 211
DGRTLADYNI
Sbjct: 86 DGRTLADYNI 95
Score = 62.8 bits (151), Expect = 3e-08
Identities = 31/31 (100%), Positives = 31/31 (100%)
Frame = +2
Query: 2 HLVLRLRGGMQIFVKTLTGKTITLEVESSDT 94
HLVLRLRGGMQIFVKTLTGKTITLEVESSDT
Sbjct: 102 HLVLRLRGGMQIFVKTLTGKTITLEVESSDT 132
>gb|AAC35858.1| polyubiquitin [Capsicum chinense]
Length = 265
Score = 139 bits (351), Expect = 2e-31
Identities = 70/70 (100%), Positives = 70/70 (100%)
Frame = +2
Query: 2 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 181
HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 28 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 87
Query: 182 DGRTLADYNI 211
DGRTLADYNI
Sbjct: 88 DGRTLADYNI 97
Score = 139 bits (351), Expect = 2e-31
Identities = 70/70 (100%), Positives = 70/70 (100%)
Frame = +2
Query: 2 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 181
HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 104 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 163
Query: 182 DGRTLADYNI 211
DGRTLADYNI
Sbjct: 164 DGRTLADYNI 173
Score = 138 bits (347), Expect = 5e-31
Identities = 69/70 (98%), Positives = 69/70 (98%)
Frame = +2
Query: 2 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLE 181
HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLE
Sbjct: 180 HLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKTKIQDKEGIPPDQQRLIFAGKQLE 239
Query: 182 DGRTLADYNI 211
DGRTLADYNI
Sbjct: 240 DGRTLADYNI 249