BLASTX nr result

ID: Coptis24_contig00012770 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012770
         (1133 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272569.1| PREDICTED: probable membrane-associated kina...   204   4e-50
ref|XP_002304523.1| predicted protein [Populus trichocarpa] gi|2...   198   2e-48
emb|CBI34403.3| unnamed protein product [Vitis vinifera]              197   4e-48
ref|XP_002298006.1| predicted protein [Populus trichocarpa] gi|2...   192   1e-46
ref|XP_003611048.1| hypothetical protein MTR_5g009870 [Medicago ...   183   8e-44

>ref|XP_002272569.1| PREDICTED: probable membrane-associated kinase regulator 2-like
            [Vitis vinifera]
          Length = 452

 Score =  204 bits (518), Expect = 4e-50
 Identities = 143/325 (44%), Positives = 163/325 (50%), Gaps = 40/325 (12%)
 Frame = -1

Query: 1088 FTVDSSGSTGNRTDPNLTLSPSDDLFFKGRFVPXXXXXXXXXXXXXXSAHSNNNKLQFPG 909
            FT+ SSGS+G+RTDPNL+LSPSDDLFFKGR VP               +  N+   QFP 
Sbjct: 121  FTLSSSGSSGDRTDPNLSLSPSDDLFFKGRLVPIEPSSLVFNS-----SEPNSKGNQFPV 175

Query: 908  SFLKPATKLRVLMLGFKNKPKSEKIEPTK------------------------------- 822
            S LK ATK RV MLG K K KS  +E T+                               
Sbjct: 176  SLLKSATKFRVFMLGLK-KSKSSTVEKTESNGSASATPKQDKQESQGQPQPQPQSQSQPQ 234

Query: 821  -------KSFTVKFKVEEVPIVSLFTRDXXXXXXXXXXXXXXXXXXXXXXXXXS--RDSL 669
                   K FTVKFKVEEVPI+SLFTRD                            +D +
Sbjct: 235  QQKQQESKFFTVKFKVEEVPIMSLFTRDNSSRSSTGTTKAQKQNSDETASDEKRFSKDVM 294

Query: 668  HKYLKMVKQLNFRVSKGFSGQLMSNLSSPTPLASPSKKIDGEMKEGEVITSSNVVNAKNQ 489
             KYLKMVK L  RVS+ +  +L    S    L S +K            TS      +  
Sbjct: 295  QKYLKMVKPLYVRVSRRYGEKL--RFSGQLSLGSGAKPGPATAPAANQKTSPTKSKTEPD 352

Query: 488  KEGNLTAGLRNVRKHLGKSRXXXXXXXXXXXXXATQSRRHDDSLLQQQDGIQSAILHCKR 309
            ++GN+ AGLR V KHLGKSR               QSRR DDSLLQQQDGIQSAILHCKR
Sbjct: 353  QDGNIPAGLRVVCKHLGKSRSASSAVAAVPSAPC-QSRRRDDSLLQQQDGIQSAILHCKR 411

Query: 308  SFTASRESDSSALSRCASDPSHEKS 234
            SF ASR+ DSS LSR  SDPSHEKS
Sbjct: 412  SFNASRDLDSSLLSRSVSDPSHEKS 436


>ref|XP_002304523.1| predicted protein [Populus trichocarpa] gi|222841955|gb|EEE79502.1|
            predicted protein [Populus trichocarpa]
          Length = 357

 Score =  198 bits (503), Expect = 2e-48
 Identities = 147/336 (43%), Positives = 165/336 (49%), Gaps = 50/336 (14%)
 Frame = -1

Query: 1091 DFTVDSSGSTGNRTDPNLTLSPSDDLFFKGRFVPXXXXXXXXXXXXXXSAHSNNNKLQFP 912
            +FT+ SS S+ +R D NL LSPSDDLFFKGR VP                  N+   QF 
Sbjct: 8    NFTL-SSASSNDRRDQNLALSPSDDLFFKGRLVPIESSSLEL----------NSKSSQFS 56

Query: 911  GSFLKPATKLRVLMLGFKNKP-------KSEKIEPT-------------------KKSFT 810
             S LK ATK RV M GFK KP       K+E   PT                    K FT
Sbjct: 57   VSLLKSATKFRVFMSGFKRKPNTTTTNEKTEANVPTLASAAPKQQGEKDEENGKQSKFFT 116

Query: 809  VKFKVEEVPIVSLFTRDXXXXXXXXXXXXXXXXXXXXXXXXXS---------RDSLHKYL 657
            VKFKVEEVPI+SLFTR+                         +         +D + KYL
Sbjct: 117  VKFKVEEVPIMSLFTRENSKSIKSSQQKQSSAEESTASAAGAAFSDDKQKFSKDVMQKYL 176

Query: 656  KMVKQLNFRVSKG------FSGQLM-----SNLSSPTPLASPSKKID----GEMKEGEVI 522
            K VK L  RVSK       FSGQL         + P+P     K I     G+ KE    
Sbjct: 177  KKVKPLYIRVSKRYGEKLKFSGQLSFGSGPKTSAPPSPSTVAQKPITADNGGKEKESAEA 236

Query: 521  TSSNVVNAKNQKEGNLTAGLRNVRKHLGKSRXXXXXXXXXXXXXATQSRRHDDSLLQQQD 342
             +  V + K  K+GNL AGLR V KHLGKSR                S R DDSLLQQQD
Sbjct: 237  PTVAVSSMKGPKQGNLPAGLRVVCKHLGKSRSASSAAVAAAPPVPVLSNRRDDSLLQQQD 296

Query: 341  GIQSAILHCKRSFTASRESDSSALSRCASDPSHEKS 234
            GIQSAILHCKRSF ASR+SDSS LSR ASDPSHEKS
Sbjct: 297  GIQSAILHCKRSFNASRDSDSSVLSRSASDPSHEKS 332


>emb|CBI34403.3| unnamed protein product [Vitis vinifera]
          Length = 320

 Score =  197 bits (501), Expect = 4e-48
 Identities = 134/297 (45%), Positives = 161/297 (54%), Gaps = 12/297 (4%)
 Frame = -1

Query: 1088 FTVDSSGSTGNRTDPNLTLSPSDDLFFKGRFVPXXXXXXXXXXXXXXSAHSNNNKLQFPG 909
            FT+ SSGS+G+RTDPNL+LSPSDDLFFKGR VP               +  N+   QFP 
Sbjct: 41   FTLSSSGSSGDRTDPNLSLSPSDDLFFKGRLVPIEPSSLVFNS-----SEPNSKGNQFPV 95

Query: 908  SFLKPATKLRVLMLGFKNKPKSEKIEPTKKSFTVKFKVEEVPIVSLFTRDXXXXXXXXXX 729
            S LK ATK RV MLG K K KS  +E T +S     K  +                    
Sbjct: 96   SLLKSATKFRVFMLGLK-KSKSSTVEKTDRSSRSNKKNSD-------------------- 134

Query: 728  XXXXXXXXXXXXXXXSRDSLHKYLKMVKQLNFRVSKG------FSGQL-MSNLSSPTPLA 570
                           S+D + KYLKMVK L  RVS+       FSGQL + + + P P  
Sbjct: 135  ------ETASDEKRFSKDVMQKYLKMVKPLYVRVSRRYGEKLRFSGQLSLGSGAKPGPAT 188

Query: 569  SPSKK-----IDGEMKEGEVITSSNVVNAKNQKEGNLTAGLRNVRKHLGKSRXXXXXXXX 405
            +P+          + +  + +T +  +NAK+QK+GN+ AGLR V KHLGKSR        
Sbjct: 189  APAANQKTSPTKSKTEPDQDVTETPAINAKSQKQGNIPAGLRVVCKHLGKSRSASSAVAA 248

Query: 404  XXXXXATQSRRHDDSLLQQQDGIQSAILHCKRSFTASRESDSSALSRCASDPSHEKS 234
                   QSRR DDSLLQQQDGIQSAILHCKRSF ASR+ DSS LSR  SDPSHEKS
Sbjct: 249  VPSAPC-QSRRRDDSLLQQQDGIQSAILHCKRSFNASRDLDSSLLSRSVSDPSHEKS 304


>ref|XP_002298006.1| predicted protein [Populus trichocarpa] gi|222845264|gb|EEE82811.1|
            predicted protein [Populus trichocarpa]
          Length = 470

 Score =  192 bits (489), Expect = 1e-46
 Identities = 142/338 (42%), Positives = 165/338 (48%), Gaps = 51/338 (15%)
 Frame = -1

Query: 1094 MDFTVDSSGSTGNRTDPNLTLSPSDDLFFKGRFVPXXXXXXXXXXXXXXSAHSNNNKLQF 915
            ++FT+ SS S+ +R+D NL LSPSDDLFFKGR VP              S   N+   QF
Sbjct: 118  INFTL-SSASSNDRSDLNLALSPSDDLFFKGRLVP----------IEPSSLEPNSKSSQF 166

Query: 914  PGSFLKPATKLRVLMLGFKNKP---------------------------KSEKIEPTKKS 816
              SFLK A K RV MLG K KP                           K E+     K 
Sbjct: 167  SVSFLKSAVKFRVFMLGLKKKPNTTTTNEKAEANVVPALASSTPELQGEKDEENGKQSKL 226

Query: 815  FTVKFKVEEVPIVSLFTRD--------XXXXXXXXXXXXXXXXXXXXXXXXXSRDSLHKY 660
            FTVKFKVEEVP++SLFTR+                                 S+D + KY
Sbjct: 227  FTVKFKVEEVPVMSLFTRENSKSIKSSQKQNSTEESTASAVGVASSDEKLKFSKDVMQKY 286

Query: 659  LKMVKQLNFRVSK------GFSGQLMSNLSSPTPLASP----------SKKIDGEMKEGE 528
            L+ VK L  RVSK       FSGQL       TP A P          + K++ E KE  
Sbjct: 287  LQKVKPLYIRVSKRYGEKLKFSGQLSLGSGQKTPTAPPLSTVTQKTTTADKVEKE-KESV 345

Query: 527  VITSSNVVNAKNQKEGNLTAGLRNVRKHLGKSRXXXXXXXXXXXXXATQSRRHDDSLLQQ 348
               +  V + K +K+GNL +GLR V KHLGK R                S R DDSLLQQ
Sbjct: 346  EDPAVAVTDHKGRKQGNLPSGLRVVCKHLGKRRSASAAAVAAAPPGPVLSERRDDSLLQQ 405

Query: 347  QDGIQSAILHCKRSFTASRESDSSALSRCASDPSHEKS 234
             DGIQSAILHCKRSF ASR+SDSS LSR  SDPSHEKS
Sbjct: 406  HDGIQSAILHCKRSFNASRDSDSSVLSRSVSDPSHEKS 443


>ref|XP_003611048.1| hypothetical protein MTR_5g009870 [Medicago truncatula]
            gi|355512383|gb|AES94006.1| hypothetical protein
            MTR_5g009870 [Medicago truncatula]
          Length = 406

 Score =  183 bits (464), Expect = 8e-44
 Identities = 138/313 (44%), Positives = 165/313 (52%), Gaps = 15/313 (4%)
 Frame = -1

Query: 1091 DFTVDSSGSTGNRTDPNLTLSPSDDLFFKGRFVPXXXXXXXXXXXXXXSAHSN-NNKLQF 915
            +F +  S S   R+D NL+LSPS+DLFFKG+ V               S+ S  NNK QF
Sbjct: 103  EFKITLSPSNNERSDANLSLSPSEDLFFKGKLVQLKSSSFILNNNNNNSSSSEPNNKPQF 162

Query: 914  PGSFLKPATKLRVLMLGFKNKPKSEKIEPTK--KSFTVKFKVEEVPIVSLFTRDXXXXXX 741
              S LK ATK RV M G K KPK++ +   K  K   +KFKVEEVPIVSLFTRD      
Sbjct: 163  TASLLKSATKFRVFMSGLK-KPKTDSVLEKKQHKPERIKFKVEEVPIVSLFTRDNSSKNS 221

Query: 740  XXXXXXXXXXXXXXXXXXXSRDS-------LHKYLKMVKQLNFRVSKGFSGQLMSNLSSP 582
                                 +        +HKYLKMVK L  RVS+ +S    S     
Sbjct: 222  NKSQTNQNQKVEHESSLSPLEEKRFSKEIVMHKYLKMVKPLYIRVSRRYSHGDKS----- 276

Query: 581  TPLASPSKKIDGEMK-EGEVITSSNVVNAK--NQKEGN-LTAGLRNVRKHLGKSRXXXXX 414
                SPS+K++ E   EGE +  +   NAK  +QK+GN + AGLR V KHLGKSR     
Sbjct: 277  ----SPSEKVEAETATEGETVAENEENNAKTQSQKQGNNIPAGLRVVYKHLGKSRSASSA 332

Query: 413  XXXXXXXXATQSRRHDDSLLQQQDGIQSAILHCKRSFTASRESD-SSALSRCASDPSHEK 237
                     + S+R DDSLLQQQDGIQ AILHCKRSF ASRE + SS L R  SDP  E 
Sbjct: 333  VAASPPVLVS-SKRRDDSLLQQQDGIQGAILHCKRSFNASRECETSSQLPRSVSDPLREI 391

Query: 236  SKVANSSRTSLDE 198
            S     SR S D+
Sbjct: 392  S--PELSRKSSDK 402


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