BLASTX nr result

ID: Coptis24_contig00012769 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012769
         (701 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280985.2| PREDICTED: uncharacterized mscS family prote...   246   4e-63
emb|CBI37812.3| unnamed protein product [Vitis vinifera]              246   4e-63
ref|XP_002521235.1| protein kinase, putative [Ricinus communis] ...   242   5e-62
dbj|BAI63585.1| ACT-domain-containing protein kinase [Lotus japo...   233   2e-59
ref|XP_002306203.1| predicted protein [Populus trichocarpa] gi|2...   233   3e-59

>ref|XP_002280985.2| PREDICTED: uncharacterized mscS family protein At1g78610-like
           [Vitis vinifera]
          Length = 1515

 Score =  246 bits (627), Expect = 4e-63
 Identities = 117/134 (87%), Positives = 127/134 (94%)
 Frame = +2

Query: 2   VQTQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGVVLWELLTGKLPYEHLTPLQAA 181
           V+ QSGVMTAETGTYRWMAPEVIEHKPYD KADVFSFG+VLWELLTGKLPYE+LTPLQAA
Sbjct: 471 VKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAA 530

Query: 182 VGVVQKGLRPTVPKQTHPKLVQLLERCWQQEPTLRPDFSEIIKILQQIAKEVGDEAEGQR 361
           VGVVQKGLRPT+PK THPKL +LLERCWQQ+PTLRPDFSEII+ILQQIAKEVGDE + ++
Sbjct: 531 VGVVQKGLRPTMPKNTHPKLAELLERCWQQDPTLRPDFSEIIEILQQIAKEVGDEEDRRK 590

Query: 362 EKSSGGFLSVLRRG 403
           EKSS GFLSVLRRG
Sbjct: 591 EKSSSGFLSVLRRG 604


>emb|CBI37812.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  246 bits (627), Expect = 4e-63
 Identities = 117/134 (87%), Positives = 127/134 (94%)
 Frame = +2

Query: 2   VQTQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGVVLWELLTGKLPYEHLTPLQAA 181
           V+ QSGVMTAETGTYRWMAPEVIEHKPYD KADVFSFG+VLWELLTGKLPYE+LTPLQAA
Sbjct: 445 VKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKLPYEYLTPLQAA 504

Query: 182 VGVVQKGLRPTVPKQTHPKLVQLLERCWQQEPTLRPDFSEIIKILQQIAKEVGDEAEGQR 361
           VGVVQKGLRPT+PK THPKL +LLERCWQQ+PTLRPDFSEII+ILQQIAKEVGDE + ++
Sbjct: 505 VGVVQKGLRPTMPKNTHPKLAELLERCWQQDPTLRPDFSEIIEILQQIAKEVGDEEDRRK 564

Query: 362 EKSSGGFLSVLRRG 403
           EKSS GFLSVLRRG
Sbjct: 565 EKSSSGFLSVLRRG 578


>ref|XP_002521235.1| protein kinase, putative [Ricinus communis]
           gi|223539503|gb|EEF41091.1| protein kinase, putative
           [Ricinus communis]
          Length = 558

 Score =  242 bits (618), Expect = 5e-62
 Identities = 112/134 (83%), Positives = 126/134 (94%)
 Frame = +2

Query: 2   VQTQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGVVLWELLTGKLPYEHLTPLQAA 181
           V+ Q+GVMTAETGTYRWMAPEVIEHKPYD KAD+FSF +VLWELLTGKLPYE+LTPLQAA
Sbjct: 422 VKAQTGVMTAETGTYRWMAPEVIEHKPYDHKADIFSFAIVLWELLTGKLPYEYLTPLQAA 481

Query: 182 VGVVQKGLRPTVPKQTHPKLVQLLERCWQQEPTLRPDFSEIIKILQQIAKEVGDEAEGQR 361
           VGVVQKGLRPT+PK THPKL +LLE+CWQQ+P LRPDFSEII++LQQI KEVG+E EG++
Sbjct: 482 VGVVQKGLRPTIPKHTHPKLAELLEKCWQQDPALRPDFSEIIEMLQQIVKEVGEEGEGRK 541

Query: 362 EKSSGGFLSVLRRG 403
           EKSSGGFLSVLRRG
Sbjct: 542 EKSSGGFLSVLRRG 555


>dbj|BAI63585.1| ACT-domain-containing protein kinase [Lotus japonicus]
          Length = 578

 Score =  233 bits (595), Expect = 2e-59
 Identities = 111/134 (82%), Positives = 121/134 (90%)
 Frame = +2

Query: 2   VQTQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGVVLWELLTGKLPYEHLTPLQAA 181
           V+ QSGVMTAETGTYRWMAPEVIEHKPYD KADVFSFGVVLWELLTGKLPYE+LTPLQAA
Sbjct: 443 VKAQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGVVLWELLTGKLPYEYLTPLQAA 502

Query: 182 VGVVQKGLRPTVPKQTHPKLVQLLERCWQQEPTLRPDFSEIIKILQQIAKEVGDEAEGQR 361
           +GVVQKGLRPT+PK THPK V+LLER WQQ+ TLRPDFSEII ILQ++AKEVGD+ E +R
Sbjct: 503 IGVVQKGLRPTIPKNTHPKFVELLERSWQQDSTLRPDFSEIIDILQKLAKEVGDDGEDRR 562

Query: 362 EKSSGGFLSVLRRG 403
              SGGFLS LRRG
Sbjct: 563 RDKSGGFLSALRRG 576


>ref|XP_002306203.1| predicted protein [Populus trichocarpa] gi|222849167|gb|EEE86714.1|
           predicted protein [Populus trichocarpa]
          Length = 494

 Score =  233 bits (594), Expect = 3e-59
 Identities = 110/133 (82%), Positives = 123/133 (92%)
 Frame = +2

Query: 2   VQTQSGVMTAETGTYRWMAPEVIEHKPYDQKADVFSFGVVLWELLTGKLPYEHLTPLQAA 181
           V+ Q+G+MTAETGTYRWMAPEVIEHKPYD KADVFSFG+VLWELLTGK+PYE+LTPLQAA
Sbjct: 361 VKAQTGIMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKIPYEYLTPLQAA 420

Query: 182 VGVVQKGLRPTVPKQTHPKLVQLLERCWQQEPTLRPDFSEIIKILQQIAKEVGDEAEGQR 361
           VGVVQKGLRPT+PK T PKL +LLE+CWQQ+P LRPDFSEII+ILQQIAKEVGD  E ++
Sbjct: 421 VGVVQKGLRPTIPKNTQPKLAELLEKCWQQDPALRPDFSEIIEILQQIAKEVGDCGEWRK 480

Query: 362 EKSSGGFLSVLRR 400
           EKSSG FLSVLRR
Sbjct: 481 EKSSGRFLSVLRR 493


Top