BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012763
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516498.1| Exosome complex exonuclease RRP46, putative ...   177   8e-43
ref|XP_004164036.1| PREDICTED: exosome complex exonuclease RRP46...   176   1e-42
ref|XP_004150286.1| PREDICTED: exosome complex exonuclease RRP46...   176   1e-42
ref|XP_002281273.1| PREDICTED: exosome complex exonuclease RRP46...   175   4e-42
ref|XP_002877464.1| hypothetical protein ARALYDRAFT_485002 [Arab...   174   9e-42

>ref|XP_002516498.1| Exosome complex exonuclease RRP46, putative [Ricinus communis]
           gi|223544318|gb|EEF45839.1| Exosome complex exonuclease
           RRP46, putative [Ricinus communis]
          Length = 211

 Score =  177 bits (449), Expect = 8e-43
 Identities = 83/100 (83%), Positives = 91/100 (91%)
 Frame = +3

Query: 42  MEVDRVDGRTPNQLRPLTCSRNVLNRAHGSARWSQGDTILLAAVYGPKAGTRKNGNPEKA 221
           M++DR DGRTPNQLRPL CSRNVLNRAHGSA W QGDT +LAAVYGPK GT+KN NPEKA
Sbjct: 1   MDIDRDDGRTPNQLRPLACSRNVLNRAHGSASWCQGDTKVLAAVYGPKPGTKKNENPEKA 60

Query: 222 SIEVIWKPKTGQIGKEEKEYEMILERTLQSICLLTVNPNT 341
            IEVIWKPKTGQIGK EKEYEMIL+RTLQ+IC+LT+NPNT
Sbjct: 61  CIEVIWKPKTGQIGKVEKEYEMILKRTLQTICVLTINPNT 100


>ref|XP_004164036.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Cucumis
           sativus]
          Length = 243

 Score =  176 bits (447), Expect = 1e-42
 Identities = 85/100 (85%), Positives = 91/100 (91%)
 Frame = +3

Query: 42  MEVDRVDGRTPNQLRPLTCSRNVLNRAHGSARWSQGDTILLAAVYGPKAGTRKNGNPEKA 221
           ME+DR DGRTPNQLRPL CS NVLNRAHGSA WSQGDT +LAAVYGPKAGT+KN NPEKA
Sbjct: 1   MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60

Query: 222 SIEVIWKPKTGQIGKEEKEYEMILERTLQSICLLTVNPNT 341
           SIEVIWKPKTGQIGK E+E EMIL+RTLQSIC+LT NPNT
Sbjct: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT 100


>ref|XP_004150286.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Cucumis
           sativus]
          Length = 243

 Score =  176 bits (447), Expect = 1e-42
 Identities = 85/100 (85%), Positives = 91/100 (91%)
 Frame = +3

Query: 42  MEVDRVDGRTPNQLRPLTCSRNVLNRAHGSARWSQGDTILLAAVYGPKAGTRKNGNPEKA 221
           ME+DR DGRTPNQLRPL CS NVLNRAHGSA WSQGDT +LAAVYGPKAGT+KN NPEKA
Sbjct: 1   MEIDRDDGRTPNQLRPLACSCNVLNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKA 60

Query: 222 SIEVIWKPKTGQIGKEEKEYEMILERTLQSICLLTVNPNT 341
           SIEVIWKPKTGQIGK E+E EMIL+RTLQSIC+LT NPNT
Sbjct: 61  SIEVIWKPKTGQIGKLERECEMILKRTLQSICILTTNPNT 100


>ref|XP_002281273.1| PREDICTED: exosome complex exonuclease RRP46 homolog [Vitis
           vinifera]
          Length = 245

 Score =  175 bits (443), Expect = 4e-42
 Identities = 82/101 (81%), Positives = 91/101 (90%)
 Frame = +3

Query: 39  SMEVDRVDGRTPNQLRPLTCSRNVLNRAHGSARWSQGDTILLAAVYGPKAGTRKNGNPEK 218
           SME+ R DGRT NQLRPL CSRN+LNRAHGSA WSQGDT +LAAVYGPKAGT+KN NPEK
Sbjct: 2   SMEIGRDDGRTANQLRPLACSRNILNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEK 61

Query: 219 ASIEVIWKPKTGQIGKEEKEYEMILERTLQSICLLTVNPNT 341
           A IEV+WKPKTGQIGK EKEYE+IL+RTL+SICLL +NPNT
Sbjct: 62  ACIEVVWKPKTGQIGKPEKEYEVILKRTLKSICLLNINPNT 102


>ref|XP_002877464.1| hypothetical protein ARALYDRAFT_485002 [Arabidopsis lyrata subsp.
           lyrata] gi|297323302|gb|EFH53723.1| hypothetical protein
           ARALYDRAFT_485002 [Arabidopsis lyrata subsp. lyrata]
          Length = 242

 Score =  174 bits (440), Expect = 9e-42
 Identities = 81/100 (81%), Positives = 90/100 (90%)
 Frame = +3

Query: 42  MEVDRVDGRTPNQLRPLTCSRNVLNRAHGSARWSQGDTILLAAVYGPKAGTRKNGNPEKA 221
           ME+DR DGRTPNQLRPL CSRN+L+R HGSA WSQGDT +LAAVYGPKAGT+KN N EKA
Sbjct: 1   MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60

Query: 222 SIEVIWKPKTGQIGKEEKEYEMILERTLQSICLLTVNPNT 341
             EVIWKPKTGQIGK EKEYEMI++RT+QSIC+LTVNPNT
Sbjct: 61  CFEVIWKPKTGQIGKVEKEYEMIMKRTIQSICVLTVNPNT 100