BLASTX nr result

ID: Coptis24_contig00012747 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012747
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532492.1| Golgin-84, putative [Ricinus communis] gi|22...   121   6e-26
ref|XP_003532539.1| PREDICTED: golgin candidate 2-like [Glycine ...   119   4e-25
ref|XP_003631094.1| Golgin candidate [Medicago truncatula] gi|35...   119   4e-25
emb|CBI15559.3| unnamed protein product [Vitis vinifera]              118   6e-25
ref|XP_002278278.1| PREDICTED: golgin candidate 2-like [Vitis vi...   118   6e-25

>ref|XP_002532492.1| Golgin-84, putative [Ricinus communis] gi|223527791|gb|EEF29891.1|
           Golgin-84, putative [Ricinus communis]
          Length = 691

 Score =  121 bits (304), Expect = 6e-26
 Identities = 63/75 (84%), Positives = 67/75 (89%)
 Frame = +3

Query: 315 IKEHENIVARLEGEKQSLEKILEERAKQQAQEASELQMTMMETMNAVDLEKQKHSYTRME 494
           IKE EN+VARLEGEKQSLEKILEERAKQQAQEAS+LQ TMMETM+AV+LEKQKH  TRME
Sbjct: 384 IKERENMVARLEGEKQSLEKILEERAKQQAQEASDLQTTMMETMDAVELEKQKHKNTRME 443

Query: 495 AFTRLTKLETTNADL 539
           A  RL KLET NADL
Sbjct: 444 ALARLAKLETANADL 458


>ref|XP_003532539.1| PREDICTED: golgin candidate 2-like [Glycine max]
          Length = 689

 Score =  119 bits (297), Expect = 4e-25
 Identities = 61/75 (81%), Positives = 66/75 (88%)
 Frame = +3

Query: 315 IKEHENIVARLEGEKQSLEKILEERAKQQAQEASELQMTMMETMNAVDLEKQKHSYTRME 494
           IKE ENIVA+LEGEK+SLEKILEERAKQQAQEAS+LQ TMMETM AV+LEKQKH+ TRME
Sbjct: 352 IKERENIVAKLEGEKESLEKILEERAKQQAQEASQLQSTMMETMEAVELEKQKHNNTRME 411

Query: 495 AFTRLTKLETTNADL 539
              RL KLET NADL
Sbjct: 412 VLARLAKLETVNADL 426


>ref|XP_003631094.1| Golgin candidate [Medicago truncatula] gi|355525116|gb|AET05570.1|
           Golgin candidate [Medicago truncatula]
          Length = 667

 Score =  119 bits (297), Expect = 4e-25
 Identities = 61/75 (81%), Positives = 67/75 (89%)
 Frame = +3

Query: 315 IKEHENIVARLEGEKQSLEKILEERAKQQAQEASELQMTMMETMNAVDLEKQKHSYTRME 494
           IKE EN+VA+LEGEK+SLEKILEERAKQQAQEAS+LQ TMMETM AV+LEKQKH+ TRME
Sbjct: 331 IKEKENMVAKLEGEKESLEKILEERAKQQAQEASQLQSTMMETMEAVELEKQKHNNTRME 390

Query: 495 AFTRLTKLETTNADL 539
             TRL KLET NADL
Sbjct: 391 ILTRLAKLETANADL 405


>emb|CBI15559.3| unnamed protein product [Vitis vinifera]
          Length = 479

 Score =  118 bits (295), Expect = 6e-25
 Identities = 61/75 (81%), Positives = 66/75 (88%)
 Frame = +3

Query: 315 IKEHENIVARLEGEKQSLEKILEERAKQQAQEASELQMTMMETMNAVDLEKQKHSYTRME 494
           IKE EN+VARLEGEK+SLEKILEER KQQAQEASELQ TMMETM AV+LEKQKH+ TRME
Sbjct: 352 IKERENMVARLEGEKESLEKILEEREKQQAQEASELQTTMMETMEAVELEKQKHNNTRME 411

Query: 495 AFTRLTKLETTNADL 539
           A  RL KLET NA+L
Sbjct: 412 ALARLAKLETVNAEL 426


>ref|XP_002278278.1| PREDICTED: golgin candidate 2-like [Vitis vinifera]
          Length = 682

 Score =  118 bits (295), Expect = 6e-25
 Identities = 61/75 (81%), Positives = 66/75 (88%)
 Frame = +3

Query: 315 IKEHENIVARLEGEKQSLEKILEERAKQQAQEASELQMTMMETMNAVDLEKQKHSYTRME 494
           IKE EN+VARLEGEK+SLEKILEER KQQAQEASELQ TMMETM AV+LEKQKH+ TRME
Sbjct: 352 IKERENMVARLEGEKESLEKILEEREKQQAQEASELQTTMMETMEAVELEKQKHNNTRME 411

Query: 495 AFTRLTKLETTNADL 539
           A  RL KLET NA+L
Sbjct: 412 ALARLAKLETVNAEL 426


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