BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012743
         (1495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268685.1| PREDICTED: uncharacterized protein LOC100261...   578   e-162
emb|CBI28799.3| unnamed protein product [Vitis vinifera]              577   e-162
ref|XP_002524188.1| 3'-5' exonuclease, putative [Ricinus communi...   535   e-150
ref|XP_003526329.1| PREDICTED: uncharacterized protein LOC100791...   526   e-147
gb|ABX52081.1| RRP6-like protein 3 [Arabidopsis thaliana]             524   e-146

>ref|XP_002268685.1| PREDICTED: uncharacterized protein LOC100261955 [Vitis vinifera]
          Length = 936

 Score =  578 bits (1490), Expect = e-162
 Identities = 296/489 (60%), Positives = 372/489 (76%), Gaps = 4/489 (0%)
 Frame = -2

Query: 1455 METKDKMKLTLKIITLTAISLFSVAFYQRRRKQKNPPQICYLDTELNKPQSSFKRVLADN 1276
            ME+K+K+K+ + I +   +S+F  A Y++RR +K     CYL TE  KPQ SFK VLADN
Sbjct: 1    MESKEKIKIVVAIASFAVLSIFFTAQYRKRRYRKCTQSSCYLHTE-PKPQYSFKLVLADN 59

Query: 1275 SYNPFKHLN---RNRDNVLNVHPYEKEITELIGSNGVEFSRFFYGGADLDMEMKESYVWV 1105
            SY+ FKHL     N +  L+ HPYE EI+ L+ +  +EFS   +G   +D+++ +SYVWV
Sbjct: 60   SYSAFKHLKLGESNSETSLHSHPYEAEISALLENAEIEFS---FGTESMDLKISDSYVWV 116

Query: 1104 DSEEELVKLVDVLSEERLFAVDIEHHSLRSFLGFTALLQISTQKEDYLVDTIALHDVMCL 925
            ++E +L +L DVLS++R+FAVD E HSLRSFLGFTAL+QISTQ EDYLVDTIALHD + +
Sbjct: 117  ETELQLKELADVLSKQRVFAVDTEQHSLRSFLGFTALIQISTQNEDYLVDTIALHDTLDV 176

Query: 924  LRPVFSDPNICKVFHGADNDVTWLQRDFHIYIVNLFDTAKACEVLSKSHRSLAYLLETYC 745
            L+PVF++P+ICKVFHGADNDV WLQRDFHIY+VNLFDTAKACEVLSK  +SLAYLLETYC
Sbjct: 177  LQPVFANPSICKVFHGADNDVLWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYC 236

Query: 744  GVATNKMLQREDWRLRPLSEEMIQYARTDAHYLLYIASCMANELKKQTTENIVDLDDEFP 565
            GVATNK+LQREDWR RPLS EM++YA+TDAHYLLYIA+C+  EL++  +EN    DD+  
Sbjct: 237  GVATNKLLQREDWRQRPLSVEMLEYAQTDAHYLLYIANCLIAELRQHDSENSCCPDDKLR 296

Query: 564  LVREANRRSNMICLQLYTKEIEASPGESVAQSILSRNFTGQGGVSSNS-EAKELVGRLCM 388
             V EA+RRSN +CLQLY KEIE SPGES A SI+SR+  GQGG+SS + + ++LV RLC 
Sbjct: 297  FVLEASRRSNTVCLQLYIKEIEISPGESAASSIISRHLNGQGGISSKACDLQDLVRRLCT 356

Query: 387  WRDLMARVHDESLRYVLSDQAIVAVASKVPTTAIEIYDTISEADLDVEFLXXXXXXXXXX 208
            WRDLMARVHDESLRYVLSDQAI+A+A KVPTT  EI   IS+ADL+V+ L          
Sbjct: 357  WRDLMARVHDESLRYVLSDQAIIALADKVPTTQKEICTLISQADLNVDSLSSSSILPSPS 416

Query: 207  XXXXSHLEDICDLLAGKISNLGNVFQTLPQKHLGPSGCCPLSIYNYALLTKSNLRVTNGF 28
                SHLED   L   K+  L +VF  + QKHLGP G CPLS++NYA+L+K+NL++TN  
Sbjct: 417  PVVCSHLEDFNYLFQDKMGKLDDVFLEILQKHLGPDGSCPLSVFNYAILSKTNLKLTNRL 476

Query: 27   SAKQNGIKS 1
             +KQNGIK+
Sbjct: 477  VSKQNGIKN 485


>emb|CBI28799.3| unnamed protein product [Vitis vinifera]
          Length = 935

 Score =  577 bits (1487), Expect = e-162
 Identities = 296/491 (60%), Positives = 372/491 (75%), Gaps = 6/491 (1%)
 Frame = -2

Query: 1455 METKDKMKLTLKIITLTAISLFSVAFYQRRRKQKNPPQICYLDTELNKPQSSFKRVLADN 1276
            ME+K+K+K+ + I +   +S+F  A Y++RR +K     CYL TE  KPQ SFK VLADN
Sbjct: 1    MESKEKIKIVVAIASFAVLSIFFTAQYRKRRYRKCTQSSCYLHTE-PKPQYSFKLVLADN 59

Query: 1275 SYNPFKHLN---RNRDNVLNVHPYEKEITELIGSNGVEFSRFFYGGADLDMEMKESYVWV 1105
            SY+ FKHL     N +  L+ HPYE EI+ L+ +  +EFS   +G   +D+++ +SYVWV
Sbjct: 60   SYSAFKHLKLGESNSETSLHSHPYEAEISALLENAEIEFS---FGTESMDLKISDSYVWV 116

Query: 1104 DSEEELVKLVDVLSEERLFAVDIEHHSLRSFLGFTALLQISTQKEDYLVDTIALHDVMCL 925
            ++E +L +L DVLS++R+FAVD E HSLRSFLGFTAL+QISTQ EDYLVDTIALHD + +
Sbjct: 117  ETELQLKELADVLSKQRVFAVDTEQHSLRSFLGFTALIQISTQNEDYLVDTIALHDTLDV 176

Query: 924  LRPVFSDPNICKVFHGADNDVTWLQRDFHIYIVNLFDTAKACEVLSKSHRSLAYLLETYC 745
            L+PVF++P+ICKVFHGADNDV WLQRDFHIY+VNLFDTAKACEVLSK  +SLAYLLETYC
Sbjct: 177  LQPVFANPSICKVFHGADNDVLWLQRDFHIYVVNLFDTAKACEVLSKPQKSLAYLLETYC 236

Query: 744  GVATNKMLQREDWRLRPLSEEMIQYARTDAHYLLYIASCMANELKKQTTENIVDLDDEFP 565
            GVATNK+LQREDWR RPLS EM++YA+TDAHYLLYIA+C+  EL++  +EN    DD+  
Sbjct: 237  GVATNKLLQREDWRQRPLSVEMLEYAQTDAHYLLYIANCLIAELRQHDSENSCCPDDKLR 296

Query: 564  LVREANRRSNMICLQLYTKEIEASPGESVAQSILSRNFTGQGGVSSNS---EAKELVGRL 394
             V EA+RRSN +CLQLY KEIE SPGES A SI+SR+  GQGG+SS +   + ++LV RL
Sbjct: 297  FVLEASRRSNTVCLQLYIKEIEISPGESAASSIISRHLNGQGGISSKACDLQFQDLVRRL 356

Query: 393  CMWRDLMARVHDESLRYVLSDQAIVAVASKVPTTAIEIYDTISEADLDVEFLXXXXXXXX 214
            C WRDLMARVHDESLRYVLSDQAI+A+A KVPTT  EI   IS+ADL+V+ L        
Sbjct: 357  CTWRDLMARVHDESLRYVLSDQAIIALADKVPTTQKEICTLISQADLNVDSLSSSSILPS 416

Query: 213  XXXXXXSHLEDICDLLAGKISNLGNVFQTLPQKHLGPSGCCPLSIYNYALLTKSNLRVTN 34
                  SHLED   L   K+  L +VF  + QKHLGP G CPLS++NYA+L+K+NL++TN
Sbjct: 417  PSPVVCSHLEDFNYLFQDKMGKLDDVFLEILQKHLGPDGSCPLSVFNYAILSKTNLKLTN 476

Query: 33   GFSAKQNGIKS 1
               +KQNGIK+
Sbjct: 477  RLVSKQNGIKN 487


>ref|XP_002524188.1| 3'-5' exonuclease, putative [Ricinus communis]
            gi|223536557|gb|EEF38203.1| 3'-5' exonuclease, putative
            [Ricinus communis]
          Length = 977

 Score =  535 bits (1379), Expect = e-150
 Identities = 282/497 (56%), Positives = 358/497 (72%), Gaps = 12/497 (2%)
 Frame = -2

Query: 1455 METKDKMKLTLKIITLTAISLFSVAFYQ--RRRKQKNPPQICYLDTELNKPQSSFKRVLA 1282
            ME K+K+++ + I++L AIS      Y+  RR++QK     CYL ++  KPQ SFKRVLA
Sbjct: 1    MEYKEKIRIAIAIVSLAAISFVFTRQYRNRRRQRQKCSSSSCYLHSD-QKPQCSFKRVLA 59

Query: 1281 DNSYNPFKHL----NRN-----RDNVLNVHPYEKEITELIGSNGVEFSRFFYGGADLDME 1129
            DNS++ FKHL    N+N       N  + HPYE+EI+ LI ++G+EF        DL  E
Sbjct: 60   DNSFSQFKHLKLHGNKNGFDAMSGNSSSSHPYEREISALIENSGIEFGFEINSIVDLK-E 118

Query: 1128 MKESYVWVDSEEELVKLVDVLSEERLFAVDIEHHSLRSFLGFTALLQISTQKEDYLVDTI 949
            MK+ YVWV++E +L +L D LS + +FAVD E HSLRSFLGFTAL+QISTQKEDYL+DTI
Sbjct: 119  MKDDYVWVETESQLKELTDELSNQSVFAVDTEQHSLRSFLGFTALVQISTQKEDYLLDTI 178

Query: 948  ALHDVMCLLRPVFSDPNICKVFHGADNDVTWLQRDFHIYIVNLFDTAKACEVLSKSHRSL 769
            ALHD M +L  VF++P ICKVFHG DND+ WLQRDFHIY+VNLFDTAKACEVLSK  +SL
Sbjct: 179  ALHDAMGILGAVFANPKICKVFHGGDNDILWLQRDFHIYVVNLFDTAKACEVLSKPQKSL 238

Query: 768  AYLLETYCGVATNKMLQREDWRLRPLSEEMIQYARTDAHYLLYIASCMANELKKQTTENI 589
            AYLLETYCGV+TNK+LQREDWR RPL  EM+QYA TDAHYLLYIASC+  ELK++  +N 
Sbjct: 239  AYLLETYCGVSTNKLLQREDWRQRPLPAEMLQYALTDAHYLLYIASCLIAELKQKDNDNS 298

Query: 588  VDLDD-EFPLVREANRRSNMICLQLYTKEIEASPGESVAQSILSRNFTGQGGVSSNSEAK 412
                D +   + EA+RRSNMIC+QLYTKE+E  PG++ A S+ SR    QGG S + E +
Sbjct: 299  YSYPDVKLKFILEASRRSNMICMQLYTKEVEEFPGDAAASSLFSRYLNDQGGSSVSCEIQ 358

Query: 411  ELVGRLCMWRDLMARVHDESLRYVLSDQAIVAVASKVPTTAIEIYDTISEADLDVEFLXX 232
            +LV RLC WR+LMARVHDE LR+VLSDQAIV++A+KV T A+EIYDTI++AD +++ +  
Sbjct: 359  DLVRRLCTWRELMARVHDEGLRFVLSDQAIVSLANKVSTNAMEIYDTIAQAD-NMDPMNC 417

Query: 231  XXXXXXXXXXXXSHLEDICDLLAGKISNLGNVFQTLPQKHLGPSGCCPLSIYNYALLTKS 52
                        SH  D C L+    SNL ++F  L QK LGP+G CPLS+YNYALL   
Sbjct: 418  ISSQPSPSPVVCSHFYDFCCLIQENKSNLDDIFSLLLQKCLGPNGSCPLSVYNYALLISC 477

Query: 51   NLRVTNGFSAKQNGIKS 1
            ++R+TN   +K+NG KS
Sbjct: 478  DVRLTNRSMSKKNGFKS 494


>ref|XP_003526329.1| PREDICTED: uncharacterized protein LOC100791485 [Glycine max]
          Length = 873

 Score =  526 bits (1356), Expect = e-147
 Identities = 288/495 (58%), Positives = 356/495 (71%), Gaps = 10/495 (2%)
 Frame = -2

Query: 1455 METKDKMKLTLKIITL-TAISLFSVAFYQRRRKQ-KNPPQICYLDTELNKPQSSFKRVLA 1282
            M    +M +   + TL TA ++  V F  RRRKQ K+ P  CYL +E     ++FKRV+A
Sbjct: 1    MTNAHRMCVAFTVATLSTAAAVIYVLFAARRRKQHKSSP--CYLHSEQKPQCAAFKRVVA 58

Query: 1281 DNSYNPFKHLNRN--------RDNVLNVHPYEKEITELIGSNGVEFSRFFYGGADLDMEM 1126
            DNSY PFKHL  +         +N  N HPYE EIT L+ +   E      G    D+EM
Sbjct: 59   DNSYTPFKHLINDDAEFSCFLTENASNSHPYEAEITALLKNPLPEIE---LGTEIADLEM 115

Query: 1125 KESYVWVDSEEELVKLVDVLSEERLFAVDIEHHSLRSFLGFTALLQISTQKEDYLVDTIA 946
            K+SYVWV +E +L +LVDVLSEER FAVD E HSLRSFLGFTAL+QIST+++DYLVDTIA
Sbjct: 116  KDSYVWVHTEMQLKELVDVLSEERFFAVDTEQHSLRSFLGFTALVQISTREKDYLVDTIA 175

Query: 945  LHDVMCLLRPVFSDPNICKVFHGADNDVTWLQRDFHIYIVNLFDTAKACEVLSKSHRSLA 766
            LHD M +LRP+F++P+ICKVFHGADND+ WLQRDFHIY+VNLFDT+KACEVLSK  +SLA
Sbjct: 176  LHDFMGILRPIFANPSICKVFHGADNDIVWLQRDFHIYVVNLFDTSKACEVLSKPQKSLA 235

Query: 765  YLLETYCGVATNKMLQREDWRLRPLSEEMIQYARTDAHYLLYIASCMANELKKQTTENIV 586
            YLLETYCGV TNK+LQREDWR RPLS EM+ YARTDAHYLLYIA+C+ NELK+   EN  
Sbjct: 236  YLLETYCGVTTNKLLQREDWRQRPLSAEMVHYARTDAHYLLYIANCLINELKQLDNEN-S 294

Query: 585  DLDDEFPLVREANRRSNMICLQLYTKEIEASPGESVAQSILSRNFTGQGGVSSNSEAKEL 406
              DD+F  V EA+RRSNMICLQL+ KEIEASPGES A S+ SR  +  G  S ++EA+ +
Sbjct: 295  SSDDKFHFVLEASRRSNMICLQLFKKEIEASPGESSALSLFSRRVSSHGFPSISNEAQNI 354

Query: 405  VGRLCMWRDLMARVHDESLRYVLSDQAIVAVASKVPTTAIEIYDTISEADLDVEFLXXXX 226
            V +LC WRDLMAR+HDESL+YVLSDQAIVA+AS+   +  EIY+TI++AD+++E +    
Sbjct: 355  VRQLCTWRDLMARIHDESLKYVLSDQAIVALASQPSASHSEIYNTIAQADINME-MGVNP 413

Query: 225  XXXXXXXXXXSHLEDICDLLAGKISNLGNVFQTLPQKHLGPSGCCPLSIYNYALLTKSNL 46
                      SHL DI  LLA K+ N  +++  + QK LG +G CPLSI+NYALL  SNL
Sbjct: 414  LIPSPSPVVCSHLSDIYHLLANKLDN--DIYSVILQKCLGQNGSCPLSIFNYALLVNSNL 471

Query: 45   RVTNGFSAKQNGIKS 1
            R T  +  KQ G K+
Sbjct: 472  RPTLAY--KQPGPKN 484


>gb|ABX52081.1| RRP6-like protein 3 [Arabidopsis thaliana]
          Length = 892

 Score =  524 bits (1349), Expect = e-146
 Identities = 277/496 (55%), Positives = 353/496 (71%), Gaps = 11/496 (2%)
 Frame = -2

Query: 1455 METKDKMKLTLKIITLTAISLFSVAFYQRRR---KQKNPPQICYLDTELNKPQSSFKRVL 1285
            ME K+K K+ + + +L A+++  V  Y+RRR   KQ +    CYL +EL KPQ  FKRVL
Sbjct: 1    MELKEKAKVVITVASLVAVTILFVTEYRRRRQRRKQTSSLSSCYLHSEL-KPQFGFKRVL 59

Query: 1284 ADNSYNPFKHL------NRNRDNVLNVHPYEKEITELIGSNGVEFSRFFYGGADLDMEMK 1123
            ADNSY+ FKHL      + + +   N HPYE EIT L+ +  +EF  F  G  +  +EM 
Sbjct: 60   ADNSYSEFKHLKLVDASSSSLEKPSNGHPYETEITVLLENPQIEFG-FLRG--ECSLEMS 116

Query: 1122 ESYVWVDSEEELVKLVDVLSEERLFAVDIEHHSLRSFLGFTALLQISTQKEDYLVDTIAL 943
            +SYVWV++E +L +L ++L++E++FAVD E HSLRSFLGFTAL+QIST +ED+LVDTIAL
Sbjct: 117  DSYVWVETESQLKELAEILAKEQVFAVDTEQHSLRSFLGFTALIQISTHEEDFLVDTIAL 176

Query: 942  HDVMCLLRPVFSDPNICKVFHGADNDVTWLQRDFHIYIVNLFDTAKACEVLSKSHRSLAY 763
            HDVM +LRPVFSDPNICKVFHGADNDV WLQRDFHIY+VN+FDTAKACEVLSK  RSLAY
Sbjct: 177  HDVMSILRPVFSDPNICKVFHGADNDVIWLQRDFHIYVVNMFDTAKACEVLSKPQRSLAY 236

Query: 762  LLETYCGVATNKMLQREDWRLRPLSEEMIQYARTDAHYLLYIASCMANELKKQTTENIVD 583
            LLET CGVATNK+LQREDWR RPLSEEM++YARTDAHYLLYIA  +  ELK+  TE+   
Sbjct: 237  LLETVCGVATNKLLQREDWRQRPLSEEMVRYARTDAHYLLYIADSLTTELKQLATEDSSS 296

Query: 582  LDDEFPLVREANRRSNMICLQLYTKEIEASPGESVAQSILSRNFTGQGGVSSNS-EAKEL 406
             DD F  + EA+RRSNM CLQLYTKE E  PG + + SI+ R+  G G  S+ S  A+EL
Sbjct: 297  PDDRFHFLLEASRRSNMTCLQLYTKETEDFPGSAASSSIIYRHLNGHGDKSNISLNAEEL 356

Query: 405  VGRLCMWRDLMARVHDESLRYVLSDQAIVAVASKVPTTAIEIYDTISEADLDVEFL-XXX 229
            V +LC WRDLM R+HDES RYVLSDQAIV ++ K PTT  EIYDTI+  DL  E      
Sbjct: 357  VRKLCAWRDLMGRIHDESTRYVLSDQAIVGLSCKQPTTTEEIYDTIAHIDLATESSPSLS 416

Query: 228  XXXXXXXXXXXSHLEDICDLLAGKISNLGNVFQTLPQKHLGPSGCCPLSIYNYALLTKSN 49
                       SHL+DI  ++  K++ L ++   + +K LG +G CP+S++NY+LL    
Sbjct: 417  SSVQSPYPVICSHLDDIYKMILDKLAKLDDLLPVVLKKCLGTNGTCPISVFNYSLLVNFK 476

Query: 48   LRVTNGFSAKQNGIKS 1
             ++++  + KQNG K+
Sbjct: 477  TKLSSHSAPKQNGHKN 492