BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012725
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282506.1| PREDICTED: ubiquitin-associated domain-conta...    71   1e-17
ref|XP_003554120.1| PREDICTED: uncharacterized protein LOC100805...    68   3e-17
ref|NP_191233.1| Ubiquitin-associated (UBA) protein [Arabidopsis...    70   8e-17
ref|XP_002307981.1| predicted protein [Populus trichocarpa] gi|2...    67   4e-16
ref|XP_002876380.1| ubiquitin-associated /TS-N domain-containing...    70   5e-16

>ref|XP_002282506.1| PREDICTED: ubiquitin-associated domain-containing protein 2 isoform
           1 [Vitis vinifera] gi|297741648|emb|CBI32780.3| unnamed
           protein product [Vitis vinifera]
          Length = 294

 Score = 70.9 bits (172), Expect(2) = 1e-17
 Identities = 33/55 (60%), Positives = 39/55 (70%)
 Frame = -2

Query: 167 CGVLASLLYRSNISSIRHIKFPEFVSSFFSRLCWPTLGGSSPSASGRNVIGNIPS 3
           CG+LA  LYR N   IR +KFPEF+SSFFSRL  P  G SS +A  RN++GN PS
Sbjct: 177 CGILAGSLYRLNFFHIRKMKFPEFISSFFSRLSSPATGSSSTAAPSRNILGNAPS 231



 Score = 43.9 bits (102), Expect(2) = 1e-17
 Identities = 19/22 (86%), Positives = 21/22 (95%)
 Frame = -1

Query: 231 FVYLAGLQLLFSSWKRSILPGM 166
           F+YLAGLQLL SSWKRSILPG+
Sbjct: 155 FIYLAGLQLLLSSWKRSILPGI 176


>ref|XP_003554120.1| PREDICTED: uncharacterized protein LOC100805217 isoform 1 [Glycine
           max]
          Length = 293

 Score = 67.8 bits (164), Expect(2) = 3e-17
 Identities = 30/55 (54%), Positives = 39/55 (70%)
 Frame = -2

Query: 167 CGVLASLLYRSNISSIRHIKFPEFVSSFFSRLCWPTLGGSSPSASGRNVIGNIPS 3
           CG+LA  LYR N+  IR  KFPE +SSFFSR+  P++G     +S RNV+GN+PS
Sbjct: 177 CGILAGSLYRLNVFYIRKAKFPEMISSFFSRILLPSMGSPRAPSSARNVVGNLPS 231



 Score = 45.4 bits (106), Expect(2) = 3e-17
 Identities = 20/22 (90%), Positives = 21/22 (95%)
 Frame = -1

Query: 231 FVYLAGLQLLFSSWKRSILPGM 166
           F+YLAGLQLL SSWKRSILPGM
Sbjct: 155 FIYLAGLQLLLSSWKRSILPGM 176


>ref|NP_191233.1| Ubiquitin-associated (UBA) protein [Arabidopsis thaliana]
           gi|9662993|emb|CAC00737.1| putative protein [Arabidopsis
           thaliana] gi|21553945|gb|AAM63026.1| unknown
           [Arabidopsis thaliana] gi|28950711|gb|AAO63279.1|
           At3g56740 [Arabidopsis thaliana]
           gi|110735889|dbj|BAE99920.1| hypothetical protein
           [Arabidopsis thaliana] gi|332646039|gb|AEE79560.1|
           Ubiquitin-associated (UBA) protein [Arabidopsis
           thaliana]
          Length = 293

 Score = 70.5 bits (171), Expect(2) = 8e-17
 Identities = 32/60 (53%), Positives = 41/60 (68%)
 Frame = -2

Query: 188 KDLFCQACGVLASLLYRSNISSIRHIKFPEFVSSFFSRLCWPTLGGSSPSASGRNVIGNI 9
           + +F   CG++A  LYR NI  IR  KFPEFV+SFFSRL +P+ G S P A  RN++G I
Sbjct: 170 RSIFPGICGIIAGSLYRLNILGIRKAKFPEFVASFFSRLSFPSFGNSPPPAPSRNIVGTI 229



 Score = 41.2 bits (95), Expect(2) = 8e-17
 Identities = 17/22 (77%), Positives = 20/22 (90%)
 Frame = -1

Query: 231 FVYLAGLQLLFSSWKRSILPGM 166
           F+YLAG+QLL SSWKRSI PG+
Sbjct: 155 FIYLAGVQLLLSSWKRSIFPGI 176


>ref|XP_002307981.1| predicted protein [Populus trichocarpa] gi|222853957|gb|EEE91504.1|
           predicted protein [Populus trichocarpa]
          Length = 290

 Score = 66.6 bits (161), Expect(2) = 4e-16
 Identities = 32/55 (58%), Positives = 39/55 (70%)
 Frame = -2

Query: 167 CGVLASLLYRSNISSIRHIKFPEFVSSFFSRLCWPTLGGSSPSASGRNVIGNIPS 3
           CG+LA  LYR N+  IR  KFPEF++SFFSRL WP+  GS   A+ RNV G+ PS
Sbjct: 177 CGILAGSLYRLNLFGIRKAKFPEFIASFFSRLSWPST-GSPRGATSRNVTGSAPS 230



 Score = 42.7 bits (99), Expect(2) = 4e-16
 Identities = 18/22 (81%), Positives = 21/22 (95%)
 Frame = -1

Query: 231 FVYLAGLQLLFSSWKRSILPGM 166
           F+YLAG+QLL SSWKRSILPG+
Sbjct: 155 FIYLAGVQLLLSSWKRSILPGI 176


>ref|XP_002876380.1| ubiquitin-associated /TS-N domain-containing protein [Arabidopsis
           lyrata subsp. lyrata] gi|297322218|gb|EFH52639.1|
           ubiquitin-associated /TS-N domain-containing protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 293

 Score = 70.1 bits (170), Expect(2) = 5e-16
 Identities = 32/60 (53%), Positives = 41/60 (68%)
 Frame = -2

Query: 188 KDLFCQACGVLASLLYRSNISSIRHIKFPEFVSSFFSRLCWPTLGGSSPSASGRNVIGNI 9
           + +F   CG++A  LYR NI  IR  KFPEFV+SFFSRL +P+ G S P A  RN++G I
Sbjct: 170 RSIFPGICGIIAGPLYRLNILGIRKAKFPEFVASFFSRLSFPSFGNSPPPAPSRNIVGTI 229



 Score = 38.9 bits (89), Expect(2) = 5e-16
 Identities = 16/21 (76%), Positives = 19/21 (90%)
 Frame = -1

Query: 228 VYLAGLQLLFSSWKRSILPGM 166
           +YLAG+QLL SSWKRSI PG+
Sbjct: 156 IYLAGVQLLLSSWKRSIFPGI 176