BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012724
         (229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282506.1| PREDICTED: ubiquitin-associated domain-conta...   107   1e-21
ref|NP_191233.1| Ubiquitin-associated (UBA) protein [Arabidopsis...    98   8e-19
ref|XP_004168697.1| PREDICTED: uncharacterized protein LOC101228...    97   1e-18
ref|XP_004141121.1| PREDICTED: ubiquitin-associated domain-conta...    97   1e-18
ref|XP_002876380.1| ubiquitin-associated /TS-N domain-containing...    97   1e-18

>ref|XP_002282506.1| PREDICTED: ubiquitin-associated domain-containing protein 2 isoform
           1 [Vitis vinifera] gi|297741648|emb|CBI32780.3| unnamed
           protein product [Vitis vinifera]
          Length = 294

 Score =  107 bits (266), Expect = 1e-21
 Identities = 50/75 (66%), Positives = 58/75 (77%)
 Frame = -1

Query: 229 KRSILPGICGVLAVLLYRSNILGVRRIKFPEFVSSFFSRLSWPTLGGSSPPASGGNVIGN 50
           KRSILPGICG+LA  LYR N   +R++KFPEF+SSFFSRLS P  G SS  A   N++GN
Sbjct: 169 KRSILPGICGILAGSLYRLNFFHIRKMKFPEFISSFFSRLSSPATGSSSTAAPSRNILGN 228

Query: 49  IPSYTGREVEGNYPS 5
            PSY GR+VEGNYPS
Sbjct: 229 APSYAGRQVEGNYPS 243


>ref|NP_191233.1| Ubiquitin-associated (UBA) protein [Arabidopsis thaliana]
           gi|9662993|emb|CAC00737.1| putative protein [Arabidopsis
           thaliana] gi|21553945|gb|AAM63026.1| unknown
           [Arabidopsis thaliana] gi|28950711|gb|AAO63279.1|
           At3g56740 [Arabidopsis thaliana]
           gi|110735889|dbj|BAE99920.1| hypothetical protein
           [Arabidopsis thaliana] gi|332646039|gb|AEE79560.1|
           Ubiquitin-associated (UBA) protein [Arabidopsis
           thaliana]
          Length = 293

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 45/75 (60%), Positives = 56/75 (74%)
 Frame = -1

Query: 229 KRSILPGICGVLAVLLYRSNILGVRRIKFPEFVSSFFSRLSWPTLGGSSPPASGGNVIGN 50
           KRSI PGICG++A  LYR NILG+R+ KFPEFV+SFFSRLS+P+ G S PPA   N++G 
Sbjct: 169 KRSIFPGICGIIAGSLYRLNILGIRKAKFPEFVASFFSRLSFPSFGNSPPPAPSRNIVGT 228

Query: 49  IPSYTGREVEGNYPS 5
           I   TGR  E + P+
Sbjct: 229 ISPNTGRRAERSQPA 243


>ref|XP_004168697.1| PREDICTED: uncharacterized protein LOC101228515 [Cucumis sativus]
          Length = 291

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 47/76 (61%), Positives = 59/76 (77%)
 Frame = -1

Query: 229 KRSILPGICGVLAVLLYRSNILGVRRIKFPEFVSSFFSRLSWPTLGGSSPPASGGNVIGN 50
           +RSILPGICG+LA  LYR N+ G+R+ KFPEF+SSFFSRLS P+  G+ P A   +V GN
Sbjct: 169 RRSILPGICGILAGSLYRLNVFGIRKAKFPEFISSFFSRLSLPS-AGNPPAAPNRDVRGN 227

Query: 49  IPSYTGREVEGNYPSV 2
           +PS+  R+VE NYPSV
Sbjct: 228 MPSFMSRQVERNYPSV 243


>ref|XP_004141121.1| PREDICTED: ubiquitin-associated domain-containing protein 2-like
           [Cucumis sativus]
          Length = 291

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 47/76 (61%), Positives = 59/76 (77%)
 Frame = -1

Query: 229 KRSILPGICGVLAVLLYRSNILGVRRIKFPEFVSSFFSRLSWPTLGGSSPPASGGNVIGN 50
           +RSILPGICG+LA  LYR N+ G+R+ KFPEF+SSFFSRLS P+  G+ P A   +V GN
Sbjct: 169 RRSILPGICGILAGSLYRLNVFGIRKAKFPEFISSFFSRLSLPS-AGNPPAAPNRDVRGN 227

Query: 49  IPSYTGREVEGNYPSV 2
           +PS+  R+VE NYPSV
Sbjct: 228 MPSFMSRQVERNYPSV 243


>ref|XP_002876380.1| ubiquitin-associated /TS-N domain-containing protein [Arabidopsis
           lyrata subsp. lyrata] gi|297322218|gb|EFH52639.1|
           ubiquitin-associated /TS-N domain-containing protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 293

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 45/75 (60%), Positives = 56/75 (74%)
 Frame = -1

Query: 229 KRSILPGICGVLAVLLYRSNILGVRRIKFPEFVSSFFSRLSWPTLGGSSPPASGGNVIGN 50
           KRSI PGICG++A  LYR NILG+R+ KFPEFV+SFFSRLS+P+ G S PPA   N++G 
Sbjct: 169 KRSIFPGICGIIAGPLYRLNILGIRKAKFPEFVASFFSRLSFPSFGNSPPPAPSRNIVGT 228

Query: 49  IPSYTGREVEGNYPS 5
           I   TGR  E + P+
Sbjct: 229 ISPNTGRRAERSQPA 243