BLASTX nr result

ID: Coptis24_contig00012707 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012707
         (1047 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38885.3| unnamed protein product [Vitis vinifera]              413   e-113
ref|XP_002280376.1| PREDICTED: Golgi SNARE 12 protein [Vitis vin...   413   e-113
gb|AFK39131.1| unknown [Lotus japonicus]                              401   e-109
ref|XP_002882001.1| hypothetical protein ARALYDRAFT_903960 [Arab...   400   e-109
ref|NP_182045.1| Golgi SNARE 12 protein [Arabidopsis thaliana] g...   399   e-109

>emb|CBI38885.3| unnamed protein product [Vitis vinifera]
          Length = 238

 Score =  413 bits (1061), Expect = e-113
 Identities = 207/238 (86%), Positives = 221/238 (92%)
 Frame = -3

Query: 916 MDPNFELQEAGWEELRKDARKIEGDLDVKLSSYAKLSGRFTQGGYADPGSPTVGSSRSWK 737
           MDPN +LQE+GWEELRK+ARKIEGDLDVKLSSYAKL  RFTQGGY D GSPTV SSRSWK
Sbjct: 1   MDPNLDLQESGWEELRKEARKIEGDLDVKLSSYAKLGARFTQGGYVDTGSPTVSSSRSWK 60

Query: 736 SMEMEIESLLEKLQDTNDSMSRCAASATPTTSISHKLARHRDILHEFIQEFRRIKGNISS 557
           SMEMEI+SLLEKL DTND+MSRCAASA PTTS++ KLARHRDILHEF QEFRRIKGN++S
Sbjct: 61  SMEMEIQSLLEKLLDTNDAMSRCAASAAPTTSVTQKLARHRDILHEFTQEFRRIKGNMNS 120

Query: 556 MREHAELLSSVRDDISEYKASGSMSPRMQLLRERAAIHGSVSHIDDVISQAQTTRAVLGS 377
           MREHAELLSSVRDDISEYKASGSMSPRMQLLRERAAIHGS+SHIDDVISQAQTTRA L S
Sbjct: 121 MREHAELLSSVRDDISEYKASGSMSPRMQLLRERAAIHGSISHIDDVISQAQTTRAALNS 180

Query: 376 QRTLLGDVQGKVKQLGDKFPIIRGLLGAIKRKRSRDTLILAGVIAACTLFLIIYWLSK 203
           QRTL GD QGKVK L DKFPIIRGLLG+I+R+RSRDTLIL+ VIAACTLFLIIYWLSK
Sbjct: 181 QRTLFGDFQGKVKLLSDKFPIIRGLLGSIRRRRSRDTLILSAVIAACTLFLIIYWLSK 238


>ref|XP_002280376.1| PREDICTED: Golgi SNARE 12 protein [Vitis vinifera]
          Length = 239

 Score =  413 bits (1061), Expect = e-113
 Identities = 207/238 (86%), Positives = 221/238 (92%)
 Frame = -3

Query: 916 MDPNFELQEAGWEELRKDARKIEGDLDVKLSSYAKLSGRFTQGGYADPGSPTVGSSRSWK 737
           MDPN +LQE+GWEELRK+ARKIEGDLDVKLSSYAKL  RFTQGGY D GSPTV SSRSWK
Sbjct: 2   MDPNLDLQESGWEELRKEARKIEGDLDVKLSSYAKLGARFTQGGYVDTGSPTVSSSRSWK 61

Query: 736 SMEMEIESLLEKLQDTNDSMSRCAASATPTTSISHKLARHRDILHEFIQEFRRIKGNISS 557
           SMEMEI+SLLEKL DTND+MSRCAASA PTTS++ KLARHRDILHEF QEFRRIKGN++S
Sbjct: 62  SMEMEIQSLLEKLLDTNDAMSRCAASAAPTTSVTQKLARHRDILHEFTQEFRRIKGNMNS 121

Query: 556 MREHAELLSSVRDDISEYKASGSMSPRMQLLRERAAIHGSVSHIDDVISQAQTTRAVLGS 377
           MREHAELLSSVRDDISEYKASGSMSPRMQLLRERAAIHGS+SHIDDVISQAQTTRA L S
Sbjct: 122 MREHAELLSSVRDDISEYKASGSMSPRMQLLRERAAIHGSISHIDDVISQAQTTRAALNS 181

Query: 376 QRTLLGDVQGKVKQLGDKFPIIRGLLGAIKRKRSRDTLILAGVIAACTLFLIIYWLSK 203
           QRTL GD QGKVK L DKFPIIRGLLG+I+R+RSRDTLIL+ VIAACTLFLIIYWLSK
Sbjct: 182 QRTLFGDFQGKVKLLSDKFPIIRGLLGSIRRRRSRDTLILSAVIAACTLFLIIYWLSK 239


>gb|AFK39131.1| unknown [Lotus japonicus]
          Length = 239

 Score =  401 bits (1031), Expect = e-109
 Identities = 202/237 (85%), Positives = 217/237 (91%)
 Frame = -3

Query: 913 DPNFELQEAGWEELRKDARKIEGDLDVKLSSYAKLSGRFTQGGYADPGSPTVGSSRSWKS 734
           D N ELQE+GWEELRK+ARKIEGDLDVKLSSYAKL  RFTQGGY D GSP +GSSRSWKS
Sbjct: 3   DSNLELQESGWEELRKEARKIEGDLDVKLSSYAKLGARFTQGGYVDGGSPPLGSSRSWKS 62

Query: 733 MEMEIESLLEKLQDTNDSMSRCAASATPTTSISHKLARHRDILHEFIQEFRRIKGNISSM 554
           MEMEI+SLLEKL D NDSMSRCAASA P TS++ KLARHRDILHEF QEFRRIKGNI+SM
Sbjct: 63  MEMEIQSLLEKLLDINDSMSRCAASAGPATSVTQKLARHRDILHEFTQEFRRIKGNINSM 122

Query: 553 REHAELLSSVRDDISEYKASGSMSPRMQLLRERAAIHGSVSHIDDVISQAQTTRAVLGSQ 374
           REHAELL+SVRDDIS++K SGSMSPRMQLLRERAAIHGS+SHIDDVISQAQ TR+VLGSQ
Sbjct: 123 REHAELLTSVRDDISDFKTSGSMSPRMQLLRERAAIHGSISHIDDVISQAQATRSVLGSQ 182

Query: 373 RTLLGDVQGKVKQLGDKFPIIRGLLGAIKRKRSRDTLILAGVIAACTLFLIIYWLSK 203
           R L GDVQGKVK LGDKFPIIR LLG+I+RKRSRDTLIL+ VIAACTLFLIIYWLSK
Sbjct: 183 RALFGDVQGKVKVLGDKFPIIRSLLGSIRRKRSRDTLILSAVIAACTLFLIIYWLSK 239


>ref|XP_002882001.1| hypothetical protein ARALYDRAFT_903960 [Arabidopsis lyrata subsp.
           lyrata] gi|297327840|gb|EFH58260.1| hypothetical protein
           ARALYDRAFT_903960 [Arabidopsis lyrata subsp. lyrata]
          Length = 239

 Score =  400 bits (1027), Expect = e-109
 Identities = 199/237 (83%), Positives = 218/237 (91%)
 Frame = -3

Query: 913 DPNFELQEAGWEELRKDARKIEGDLDVKLSSYAKLSGRFTQGGYADPGSPTVGSSRSWKS 734
           + + +LQE+GWEELR++ARKIEGDLDVKLSSYAKL  RFTQGGY D GSPTVGS RSWKS
Sbjct: 3   ESSLDLQESGWEELRREARKIEGDLDVKLSSYAKLGARFTQGGYVDAGSPTVGSGRSWKS 62

Query: 733 MEMEIESLLEKLQDTNDSMSRCAASATPTTSISHKLARHRDILHEFIQEFRRIKGNISSM 554
           MEMEI+SLLEKL D NDSMSRCAASA PTTS++ KLARHRDILHE+ QEFRRIKGNI+SM
Sbjct: 63  MEMEIQSLLEKLLDINDSMSRCAASAAPTTSVTQKLARHRDILHEYTQEFRRIKGNINSM 122

Query: 553 REHAELLSSVRDDISEYKASGSMSPRMQLLRERAAIHGSVSHIDDVISQAQTTRAVLGSQ 374
           REHAELLSSVRDDISEYKASGSMSP +Q+LRERA+IHGS+SHIDDVI QAQ TRAVLGSQ
Sbjct: 123 REHAELLSSVRDDISEYKASGSMSPGVQVLRERASIHGSISHIDDVIGQAQATRAVLGSQ 182

Query: 373 RTLLGDVQGKVKQLGDKFPIIRGLLGAIKRKRSRDTLILAGVIAACTLFLIIYWLSK 203
           R+L  DVQGKVK LGDKFP+IRGLLG+IKRKRSRDTLIL+ VIAACTLFLIIYWLSK
Sbjct: 183 RSLFSDVQGKVKNLGDKFPVIRGLLGSIKRKRSRDTLILSAVIAACTLFLIIYWLSK 239


>ref|NP_182045.1| Golgi SNARE 12 protein [Arabidopsis thaliana]
           gi|13898895|gb|AAK48905.1|AF357529_1 Golgi SNARE 12
           protein [Arabidopsis thaliana] gi|2583133|gb|AAB82642.1|
           putative cis-Golgi SNARE protein [Arabidopsis thaliana]
           gi|88196757|gb|ABD43021.1| At2g45200 [Arabidopsis
           thaliana] gi|330255430|gb|AEC10524.1| Golgi SNARE 12
           protein [Arabidopsis thaliana]
          Length = 239

 Score =  399 bits (1024), Expect = e-109
 Identities = 198/237 (83%), Positives = 218/237 (91%)
 Frame = -3

Query: 913 DPNFELQEAGWEELRKDARKIEGDLDVKLSSYAKLSGRFTQGGYADPGSPTVGSSRSWKS 734
           + + +LQE+GWEELR++ARKIEGDLDVKLSSYAKL  RFTQGGY D GSPTVGS RSWKS
Sbjct: 3   ESSLDLQESGWEELRREARKIEGDLDVKLSSYAKLGARFTQGGYVDTGSPTVGSGRSWKS 62

Query: 733 MEMEIESLLEKLQDTNDSMSRCAASATPTTSISHKLARHRDILHEFIQEFRRIKGNISSM 554
           MEMEI+SLLEKL D NDSMSRCAASA PTTS++ KLARHRDILHE+ QEFRRIKGNI+S+
Sbjct: 63  MEMEIQSLLEKLLDINDSMSRCAASAAPTTSVTQKLARHRDILHEYTQEFRRIKGNINSL 122

Query: 553 REHAELLSSVRDDISEYKASGSMSPRMQLLRERAAIHGSVSHIDDVISQAQTTRAVLGSQ 374
           REHAELLSSVRDDISEYKASGSMSP +Q+LRERA+IHGS+SHIDDVI QAQ TRAVLGSQ
Sbjct: 123 REHAELLSSVRDDISEYKASGSMSPGVQVLRERASIHGSISHIDDVIGQAQATRAVLGSQ 182

Query: 373 RTLLGDVQGKVKQLGDKFPIIRGLLGAIKRKRSRDTLILAGVIAACTLFLIIYWLSK 203
           R+L  DVQGKVK LGDKFP+IRGLLG+IKRKRSRDTLIL+ VIAACTLFLIIYWLSK
Sbjct: 183 RSLFSDVQGKVKNLGDKFPVIRGLLGSIKRKRSRDTLILSAVIAACTLFLIIYWLSK 239


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