BLASTX nr result

ID: Coptis24_contig00012687 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012687
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322973.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26
ref|XP_002306327.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
ref|XP_002305025.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
ref|XP_002526891.1| serine-threonine protein kinase, plant-type,...   119   2e-25
ref|XP_002316396.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25

>ref|XP_002322973.1| predicted protein [Populus trichocarpa] gi|222867603|gb|EEF04734.1|
            predicted protein [Populus trichocarpa]
          Length = 970

 Score =  124 bits (310), Expect = 1e-26
 Identities = 65/109 (59%), Positives = 78/109 (71%)
 Frame = -3

Query: 329  EELLHPQADRKQPEWRNLNFTQCLTIAIDVASALEYLHHYFQLTIVHCDLKPSNVLLNDD 150
            ++ LHP  ++ Q   + L+FTQ L IAIDVASAL+YLHH  + TIVHCDLKPSNVLL+DD
Sbjct: 721  DQWLHPTTEQ-QYRTKKLSFTQRLNIAIDVASALDYLHHQCKTTIVHCDLKPSNVLLDDD 779

Query: 149  MTARVADFGIAKIYSATLYNSSENLASTVVLKGSIGYVAPEYGMGGPVS 3
            MTA V DF +AK  S    N S N + +V LKGSIGY+ PEYGM   VS
Sbjct: 780  MTAHVGDFELAKFLSEASKNPSINQSISVALKGSIGYIPPEYGMRSEVS 828


>ref|XP_002306327.1| predicted protein [Populus trichocarpa] gi|222855776|gb|EEE93323.1|
            predicted protein [Populus trichocarpa]
          Length = 1011

 Score =  120 bits (301), Expect = 1e-25
 Identities = 64/110 (58%), Positives = 76/110 (69%), Gaps = 1/110 (0%)
 Frame = -3

Query: 329  EELLHP-QADRKQPEWRNLNFTQCLTIAIDVASALEYLHHYFQLTIVHCDLKPSNVLLND 153
            EE LHP       PE RNL+  Q L IAIDVASAL+YLH++ Q+ +VHCDLKPSNVLL D
Sbjct: 791  EEWLHPVHISDVTPETRNLDLVQRLNIAIDVASALDYLHNHCQVPVVHCDLKPSNVLLGD 850

Query: 152  DMTARVADFGIAKIYSATLYNSSENLASTVVLKGSIGYVAPEYGMGGPVS 3
            DMTA V DFG+A+           + +S+V LKG+IGY APEYGMG  VS
Sbjct: 851  DMTACVGDFGLARFLPEASNQLPADESSSVGLKGTIGYAAPEYGMGSEVS 900


>ref|XP_002305025.1| predicted protein [Populus trichocarpa] gi|222847989|gb|EEE85536.1|
           predicted protein [Populus trichocarpa]
          Length = 613

 Score =  120 bits (301), Expect = 1e-25
 Identities = 64/111 (57%), Positives = 78/111 (70%), Gaps = 2/111 (1%)
 Frame = -3

Query: 329 EELLHP--QADRKQPEWRNLNFTQCLTIAIDVASALEYLHHYFQLTIVHCDLKPSNVLLN 156
           EE LHP   +D + PE R LN  + L IA+DVASAL+YLH+  ++ IVHCDLKPSNVLL+
Sbjct: 390 EEWLHPIHTSDHEAPEPRTLNLIKRLNIAVDVASALDYLHNDCEMQIVHCDLKPSNVLLD 449

Query: 155 DDMTARVADFGIAKIYSATLYNSSENLASTVVLKGSIGYVAPEYGMGGPVS 3
            D+TA V DFG+ K  S     SS +  S+V LKG+IGY APEYGMG  VS
Sbjct: 450 GDLTAHVGDFGLLKFLSEPSSQSSLSQKSSVGLKGTIGYAAPEYGMGSKVS 500


>ref|XP_002526891.1| serine-threonine protein kinase, plant-type, putative [Ricinus
            communis] gi|223533790|gb|EEF35522.1| serine-threonine
            protein kinase, plant-type, putative [Ricinus communis]
          Length = 1013

 Score =  119 bits (299), Expect = 2e-25
 Identities = 65/111 (58%), Positives = 81/111 (72%), Gaps = 2/111 (1%)
 Frame = -3

Query: 329  EELLHPQ--ADRKQPEWRNLNFTQCLTIAIDVASALEYLHHYFQLTIVHCDLKPSNVLLN 156
            E  LHPQ  AD +  E RNLN  Q L+IAI VASA+EYLH + Q  IVH DLKPSNVLL+
Sbjct: 795  ESWLHPQEVADNEH-ELRNLNLEQRLSIAIGVASAVEYLHCHCQPPIVHSDLKPSNVLLD 853

Query: 155  DDMTARVADFGIAKIYSATLYNSSENLASTVVLKGSIGYVAPEYGMGGPVS 3
            +DM A V DFG+AK+ S    N+ E+ +S+V++KGS+GYV PEYGMG  +S
Sbjct: 854  EDMVAHVGDFGLAKVLSKVSDNAREDQSSSVIIKGSVGYVPPEYGMGEGLS 904


>ref|XP_002316396.1| predicted protein [Populus trichocarpa] gi|222865436|gb|EEF02567.1|
            predicted protein [Populus trichocarpa]
          Length = 1006

 Score =  119 bits (298), Expect = 3e-25
 Identities = 60/110 (54%), Positives = 76/110 (69%), Gaps = 1/110 (0%)
 Frame = -3

Query: 329  EELLHP-QADRKQPEWRNLNFTQCLTIAIDVASALEYLHHYFQLTIVHCDLKPSNVLLND 153
            EE LHP     ++ E  NLN  Q L +AIDVASAL+YLH++ Q+ +VHCDLKPSNVLL+ 
Sbjct: 776  EEWLHPVHTSDEEREQGNLNLIQRLNVAIDVASALDYLHYHCQMAVVHCDLKPSNVLLDG 835

Query: 152  DMTARVADFGIAKIYSATLYNSSENLASTVVLKGSIGYVAPEYGMGGPVS 3
            DMTA V DFG+A+         S N  S++ LKG++GY APEYG+G  VS
Sbjct: 836  DMTAHVGDFGLARFRPEASVQLSSNQNSSIGLKGTVGYAAPEYGIGNEVS 885


Top