BLASTX nr result

ID: Coptis24_contig00012685 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012685
         (825 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO26510.1| AP3-1 [Actaea racemosa]                                207   2e-51
gb|AAO26518.1| AP3-1 [Clematis integrifolia]                          196   5e-48
gb|AEG25820.1| APETALA3-like protein [Actaea asiatica]                196   5e-48
gb|AAC42590.1| APETALA3 homolog DeAP3-1 [Dicentra eximia]             195   1e-47
gb|AAC42569.1| APETALA3 homolog RfAP3-1 [Ficaria verna]               194   2e-47

>gb|AAO26510.1| AP3-1 [Actaea racemosa]
          Length = 197

 Score =  207 bits (527), Expect = 2e-51
 Identities = 110/197 (55%), Positives = 136/197 (69%), Gaps = 2/197 (1%)
 Frame = +2

Query: 17  GIMKKARELTVLCDAEVSLIMVSSTGKCCDYVSPSLTQKQFFDKYQRTVGVDLWQSQYNK 196
           GIMKKA+EL VLCDAEVSLIM S+TGK  D++SP+ T K+ +DKYQ+  G++LWQSQY K
Sbjct: 2   GIMKKAKELHVLCDAEVSLIMFSNTGKMTDFISPNTTMKKMYDKYQQASGLNLWQSQYEK 61

Query: 197 MQDHLNKLEEMNKKLRREIGQRIGDQDLEGMSFNELHGLEQDLENSAKLIRLRXXXXXXX 376
           MQD+LNKL E+N+KLRREIG+R+G +DL  +SF EL GLEQ LE+S K++R R       
Sbjct: 62  MQDNLNKLMEINRKLRREIGKRLG-EDLNDLSFAELRGLEQHLESSCKIVRDRKFGLLGT 120

Query: 377 XXXXXXXXXXXMEEIHGNXXXXXXXXXXXXYALANREVVST--LTNGGLHVFAYRLRPSH 550
                      +EE+H N            YALAN E +ST  L N G HVF +RL+PS 
Sbjct: 121 QTETCRKKIKNLEEVHNNLLHEYEERLEEAYALANHEGMSTNELANDGSHVFMFRLQPSQ 180

Query: 551 PNLHDDDGGYGMHDLRL 601
           PNL  DDGGYG+HDLRL
Sbjct: 181 PNLR-DDGGYGIHDLRL 196


>gb|AAO26518.1| AP3-1 [Clematis integrifolia]
          Length = 202

 Score =  196 bits (498), Expect = 5e-48
 Identities = 98/201 (48%), Positives = 130/201 (64%), Gaps = 5/201 (2%)
 Frame = +2

Query: 17  GIMKKARELTVLCDAEVSLIMVSSTGKCCDYVSPSLTQKQFFDKYQRTVGVDLWQSQYNK 196
           GI+KKA+EL+VLCDAEVSLIM SSTGKC  ++SP+++ K+F+D+YQ+  G DLWQSQY +
Sbjct: 2   GIIKKAQELSVLCDAEVSLIMFSSTGKCTSFISPTISPKEFYDRYQQAAGTDLWQSQYQE 61

Query: 197 MQDHLNKLEEMNKKLRREIGQRIGDQDLEGMSFNELHGLEQDLENSAKLIRLRXXXXXXX 376
           M ++L KL E+N KLRREI  R+G+ DL  + F+ELH LEQ LENS+K++R R       
Sbjct: 62  MHNNLRKLMEINSKLRREIRIRVGEDDLTELDFDELHRLEQHLENSSKIVRQRKFSQIAT 121

Query: 377 XXXXXXXXXXXMEEIHGNXXXXXXXXXXXXYALANREVVSTLT-----NGGLHVFAYRLR 541
                       E+IH N            YALAN + +S+L       GG H+FA+RL 
Sbjct: 122 HTETARKKIRSQEQIHTNLMQDNYEQIEKQYALANHQSISSLELATDGAGGSHIFAFRLH 181

Query: 542 PSHPNLHDDDGGYGMHDLRLA 604
           P  P++H D+G Y  H LRLA
Sbjct: 182 PGQPHVHGDEGDYDFHQLRLA 202


>gb|AEG25820.1| APETALA3-like protein [Actaea asiatica]
          Length = 188

 Score =  196 bits (498), Expect = 5e-48
 Identities = 105/189 (55%), Positives = 126/189 (66%), Gaps = 2/189 (1%)
 Frame = +2

Query: 41  LTVLCDAEVSLIMVSSTGKCCDYVSPSLTQKQFFDKYQRTVGVDLWQSQYNKMQDHLNKL 220
           LTVLCDAEVSLIM S+TGK  D++SP+ T K+ +DKYQ   G+DLWQSQY KMQD+LNKL
Sbjct: 1   LTVLCDAEVSLIMFSNTGKMTDFISPNTTMKKMYDKYQHASGLDLWQSQYEKMQDNLNKL 60

Query: 221 EEMNKKLRREIGQRIGDQDLEGMSFNELHGLEQDLENSAKLIRLRXXXXXXXXXXXXXXX 400
            E+N+KLRREIG+R+G +DL  +SF EL GLEQ LE S K +R R               
Sbjct: 61  MEINRKLRREIGKRLG-EDLNDLSFAELRGLEQHLETSCKTVRDRKFGLLGTQTETCRKK 119

Query: 401 XXXMEEIHGNXXXXXXXXXXXXYALANREVVST--LTNGGLHVFAYRLRPSHPNLHDDDG 574
              +EE+H N            YALAN E +ST  L N G HVF +RL+PS PNL  DDG
Sbjct: 120 IKSLEEVHNNLLHEYEERLEEAYALANHEGMSTNELANDGSHVFMFRLQPSQPNLR-DDG 178

Query: 575 GYGMHDLRL 601
           GYG+HDLRL
Sbjct: 179 GYGIHDLRL 187


>gb|AAC42590.1| APETALA3 homolog DeAP3-1 [Dicentra eximia]
          Length = 199

 Score =  195 bits (495), Expect = 1e-47
 Identities = 107/201 (53%), Positives = 131/201 (65%), Gaps = 4/201 (1%)
 Frame = +2

Query: 14  AGIMKKARELTVLCDAEVSLIMVSSTGKCCDYVSPSLTQKQFFDKYQRTVGVDLWQSQYN 193
           AGIMKKARELTVLCDAEVSLIM SSTGK  +Y+SPS T K+ FD+YQ+  GV+LW S Y 
Sbjct: 1   AGIMKKARELTVLCDAEVSLIMFSSTGKFSEYISPSATTKRMFDRYQQVSGVNLWNSHYE 60

Query: 194 KMQDHLNKLEEMNKKLRREIGQRIGDQDLEGMSFNELHGLEQDLENSAKLIRLRXXXXXX 373
           +MQD+LNK +E+N KLRREI QR+G +DL  +S  EL GLEQ+++NS K++R R      
Sbjct: 61  RMQDNLNKQKEINNKLRREIRQRMG-EDLNDLSIEELRGLEQNMDNSLKIVRDRKYHVIT 119

Query: 374 XXXXXXXXXXXXMEEIHGN-XXXXXXXXXXXXYALANR---EVVSTLTNGGLHVFAYRLR 541
                       + E H N             YALAN    E    + NGG ++FA+RL+
Sbjct: 120 TQTETYRKKLRNLHETHNNLLREFEGRDEDTHYALANEGDYETALEMANGGQNIFAFRLQ 179

Query: 542 PSHPNLHDDDGGYGMHDLRLA 604
           PS PNLH D GGYG HDLRLA
Sbjct: 180 PSQPNLH-DGGGYGSHDLRLA 199


>gb|AAC42569.1| APETALA3 homolog RfAP3-1 [Ficaria verna]
          Length = 202

 Score =  194 bits (494), Expect = 2e-47
 Identities = 107/201 (53%), Positives = 132/201 (65%)
 Frame = +2

Query: 2   SKRRAGIMKKARELTVLCDAEVSLIMVSSTGKCCDYVSPSLTQKQFFDKYQRTVGVDLWQ 181
           SKRRAGIMKKA+ELTVLCDA+VSLIM SSTGKC D++SPS++ K F+DKY+   G DLW+
Sbjct: 7   SKRRAGIMKKAKELTVLCDAKVSLIMFSSTGKCVDFISPSISPKAFYDKYRDVTGDDLWK 66

Query: 182 SQYNKMQDHLNKLEEMNKKLRREIGQRIGDQDLEGMSFNELHGLEQDLENSAKLIRLRXX 361
           SQY+KMQ  L  L E N+KLRREIGQR+G +DL  +S  EL GLEQDL ++ K++R R  
Sbjct: 67  SQYDKMQQELKTLVETNRKLRREIGQRVG-EDLSNLSIKELRGLEQDLRDTEKVVRQRKF 125

Query: 362 XXXXXXXXXXXXXXXXMEEIHGNXXXXXXXXXXXXYALANREVVSTLTNGGLHVFAYRLR 541
                           + EI+GN            YALAN      L NG   VF++RLR
Sbjct: 126 GLLSSQGETQRKKIRNLAEINGNLWQEYQERMEDEYALANGMSTLELGNG---VFSFRLR 182

Query: 542 PSHPNLHDDDGGYGMHDLRLA 604
           PS  NLH+D+  Y +HDLRLA
Sbjct: 183 PSQTNLHNDE-EYEIHDLRLA 202


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