BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012682
         (734 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-a...   385   e-105
ref|XP_002529311.1| DNA repair helicase rad5,16, putative [Ricin...   384   e-104
emb|CBI23583.3| unnamed protein product [Vitis vinifera]              384   e-104
ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-a...   384   e-104
emb|CAN71217.1| hypothetical protein VITISV_033485 [Vitis vinifera]   378   e-103

>ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 3-like
            [Cucumis sativus] gi|449523563|ref|XP_004168793.1|
            PREDICTED: putative SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin subfamily A member
            3-like 3-like [Cucumis sativus]
          Length = 1113

 Score =  385 bits (989), Expect = e-105
 Identities = 187/246 (76%), Positives = 215/246 (87%), Gaps = 2/246 (0%)
 Frame = +3

Query: 3    KVLHNYAHILELLLRLRQCCNHPFLVMSRADTQKYTDLDKLTRQFLE--TSSNTSGQSVP 176
            KVLHNYA+ILELLLRLRQCCNHPFLVMSR D+Q+Y +L+KL R+FLE  T+S T  Q  P
Sbjct: 797  KVLHNYANILELLLRLRQCCNHPFLVMSRGDSQQYANLNKLARKFLESNTNSTTMEQVAP 856

Query: 177  SRAYVEEVVEGIRKGQNTECPICLESADDPVFTPCAHRMCRECIFSSWRSPSNGVCPICR 356
            +RAYVE+VVE IR+G+NTECPICLE ADD V TPCAHRMCREC+ SSWR+P+ G CPICR
Sbjct: 857  TRAYVEDVVECIRRGENTECPICLEFADDAVLTPCAHRMCRECLLSSWRTPTCGFCPICR 916

Query: 357  QHMYKNELITCPSENQFRVDIENNWQESSKVSKLLTCLEQLRLSGSGEKSIIFSQWTSFF 536
            Q + K ELITCPSE+ FRVD+E NW+ESSKVSKLL CLE++ L GSGEKSI+FSQWT+FF
Sbjct: 917  QMLRKTELITCPSESPFRVDVEKNWKESSKVSKLLECLERINLLGSGEKSIVFSQWTTFF 976

Query: 537  DLLEIALKKKGIGFLRFDGKLSQKNREYVLKEFSDSKEKMVLLMSLKAGGVGLNLTAASN 716
            DLLEI LK+K IGF RFDGKLSQK+RE VLKEFS+SKE  V+L+SLKAGGVGLNLTAASN
Sbjct: 977  DLLEIPLKRKRIGFFRFDGKLSQKHRERVLKEFSESKEIKVMLISLKAGGVGLNLTAASN 1036

Query: 717  VFLMDP 734
            VF+MDP
Sbjct: 1037 VFIMDP 1042


>ref|XP_002529311.1| DNA repair helicase rad5,16, putative [Ricinus communis]
            gi|223531235|gb|EEF33080.1| DNA repair helicase rad5,16,
            putative [Ricinus communis]
          Length = 1051

 Score =  384 bits (986), Expect = e-104
 Identities = 182/246 (73%), Positives = 218/246 (88%), Gaps = 2/246 (0%)
 Frame = +3

Query: 3    KVLHNYAHILELLLRLRQCCNHPFLVMSRADTQKYTDLDKLTRQFLETSSNTSG--QSVP 176
            KVLHNYA ILELLLRLRQCCNHPFLV+SRAD+++YTDL+KL R+FLET+++++   Q+VP
Sbjct: 735  KVLHNYASILELLLRLRQCCNHPFLVLSRADSKQYTDLNKLARRFLETNADSAAREQTVP 794

Query: 177  SRAYVEEVVEGIRKGQNTECPICLESADDPVFTPCAHRMCRECIFSSWRSPSNGVCPICR 356
            + AY+EEVVE IRKG+N ECPIC+E ADDPV TPCAHRMCREC+ SSWR+P+ G+CPICR
Sbjct: 795  TPAYIEEVVEDIRKGENNECPICMEYADDPVLTPCAHRMCRECLLSSWRTPTTGLCPICR 854

Query: 357  QHMYKNELITCPSENQFRVDIENNWQESSKVSKLLTCLEQLRLSGSGEKSIIFSQWTSFF 536
              + K +L+TCP+EN+FRV++E NW+ESSKVSKLL CLE++R S  GEKSIIFSQWTSF 
Sbjct: 855  TLLKKADLLTCPTENKFRVNVEENWKESSKVSKLLECLERIRRSDCGEKSIIFSQWTSFL 914

Query: 537  DLLEIALKKKGIGFLRFDGKLSQKNREYVLKEFSDSKEKMVLLMSLKAGGVGLNLTAASN 716
            DLLEI L+++ IGFLRFDGKL QK RE  LKEF+++KEKMVLLMSLKAGGVGLNLTAASN
Sbjct: 915  DLLEIPLRRRAIGFLRFDGKLVQKQRERTLKEFNETKEKMVLLMSLKAGGVGLNLTAASN 974

Query: 717  VFLMDP 734
            VFLMDP
Sbjct: 975  VFLMDP 980


>emb|CBI23583.3| unnamed protein product [Vitis vinifera]
          Length = 1287

 Score =  384 bits (985), Expect = e-104
 Identities = 181/246 (73%), Positives = 216/246 (87%), Gaps = 2/246 (0%)
 Frame = +3

Query: 3    KVLHNYAHILELLLRLRQCCNHPFLVMSRADTQKYTDLDKLTRQFLETS--SNTSGQSVP 176
            +VLHNYA ILELLLRLRQCCNHPFLVMSR DTQ+Y DL KL R+FLE +  S+TS  S+P
Sbjct: 877  RVLHNYASILELLLRLRQCCNHPFLVMSRGDTQQYADLSKLARKFLENNPCSDTSNHSIP 936

Query: 177  SRAYVEEVVEGIRKGQNTECPICLESADDPVFTPCAHRMCRECIFSSWRSPSNGVCPICR 356
            +RA+VEEVV GIR+G+NTECPICLESADDPV TPCAH MCREC+ SSWR+P +G+CPICR
Sbjct: 937  TRAFVEEVVGGIRRGENTECPICLESADDPVLTPCAHLMCRECLLSSWRTPLSGLCPICR 996

Query: 357  QHMYKNELITCPSENQFRVDIENNWQESSKVSKLLTCLEQLRLSGSGEKSIIFSQWTSFF 536
            + + K +LITCPSEN+FR+D+E NW+ESSK+S+LL CLE++  S  GEKSI+FSQWTSF 
Sbjct: 997  KLLKKTDLITCPSENRFRIDVEKNWKESSKISELLHCLERISQSRIGEKSIVFSQWTSFL 1056

Query: 537  DLLEIALKKKGIGFLRFDGKLSQKNREYVLKEFSDSKEKMVLLMSLKAGGVGLNLTAASN 716
            DLLEI L+++GIGFLR+DGK+ QK RE +LKEFS+++EK VLLMSLKAGGVGLNLTAASN
Sbjct: 1057 DLLEIPLRRRGIGFLRYDGKVVQKQRERILKEFSETEEKTVLLMSLKAGGVGLNLTAASN 1116

Query: 717  VFLMDP 734
            VFLMDP
Sbjct: 1117 VFLMDP 1122


>ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 3-like
            [Vitis vinifera]
          Length = 1224

 Score =  384 bits (985), Expect = e-104
 Identities = 181/246 (73%), Positives = 216/246 (87%), Gaps = 2/246 (0%)
 Frame = +3

Query: 3    KVLHNYAHILELLLRLRQCCNHPFLVMSRADTQKYTDLDKLTRQFLETS--SNTSGQSVP 176
            +VLHNYA ILELLLRLRQCCNHPFLVMSR DTQ+Y DL KL R+FLE +  S+TS  S+P
Sbjct: 908  RVLHNYASILELLLRLRQCCNHPFLVMSRGDTQQYADLSKLARKFLENNPCSDTSNHSIP 967

Query: 177  SRAYVEEVVEGIRKGQNTECPICLESADDPVFTPCAHRMCRECIFSSWRSPSNGVCPICR 356
            +RA+VEEVV GIR+G+NTECPICLESADDPV TPCAH MCREC+ SSWR+P +G+CPICR
Sbjct: 968  TRAFVEEVVGGIRRGENTECPICLESADDPVLTPCAHLMCRECLLSSWRTPLSGLCPICR 1027

Query: 357  QHMYKNELITCPSENQFRVDIENNWQESSKVSKLLTCLEQLRLSGSGEKSIIFSQWTSFF 536
            + + K +LITCPSEN+FR+D+E NW+ESSK+S+LL CLE++  S  GEKSI+FSQWTSF 
Sbjct: 1028 KLLKKTDLITCPSENRFRIDVEKNWKESSKISELLHCLERISQSRIGEKSIVFSQWTSFL 1087

Query: 537  DLLEIALKKKGIGFLRFDGKLSQKNREYVLKEFSDSKEKMVLLMSLKAGGVGLNLTAASN 716
            DLLEI L+++GIGFLR+DGK+ QK RE +LKEFS+++EK VLLMSLKAGGVGLNLTAASN
Sbjct: 1088 DLLEIPLRRRGIGFLRYDGKVVQKQRERILKEFSETEEKTVLLMSLKAGGVGLNLTAASN 1147

Query: 717  VFLMDP 734
            VFLMDP
Sbjct: 1148 VFLMDP 1153


>emb|CAN71217.1| hypothetical protein VITISV_033485 [Vitis vinifera]
          Length = 1249

 Score =  378 bits (970), Expect = e-103
 Identities = 182/254 (71%), Positives = 216/254 (85%), Gaps = 10/254 (3%)
 Frame = +3

Query: 3    KVLHNYAHILELLLRLRQCCNHPFLVM--------SRADTQKYTDLDKLTRQFLETS--S 152
            +VLHNYA ILELLLRLRQCCNHPFLVM        SR DTQ+Y DL KL R+FLE +  S
Sbjct: 925  RVLHNYASILELLLRLRQCCNHPFLVMRCSXLRMCSRGDTQQYADLSKLARKFLENNPCS 984

Query: 153  NTSGQSVPSRAYVEEVVEGIRKGQNTECPICLESADDPVFTPCAHRMCRECIFSSWRSPS 332
             TS  S+P+RA+VEEVV GIR+G+NTECPICLESADDPV TPCAH MCREC+ SSWR+P 
Sbjct: 985  XTSNHSIPTRAFVEEVVGGIRRGENTECPICLESADDPVLTPCAHLMCRECLLSSWRTPL 1044

Query: 333  NGVCPICRQHMYKNELITCPSENQFRVDIENNWQESSKVSKLLTCLEQLRLSGSGEKSII 512
            +G+CPICR+ + K +LITCPSEN+FR+D+E NW+ESSK+S+LL CLE++  S  GEKSI+
Sbjct: 1045 SGLCPICRKLLKKTDLITCPSENRFRIDVEKNWKESSKISELLHCLERISQSRIGEKSIV 1104

Query: 513  FSQWTSFFDLLEIALKKKGIGFLRFDGKLSQKNREYVLKEFSDSKEKMVLLMSLKAGGVG 692
            FSQWTSF DLLEI L+++GIGFLR+DGK+ QK RE +LKEFS+++EKMVLLMSLKAGGVG
Sbjct: 1105 FSQWTSFLDLLEIPLRRRGIGFLRYDGKVVQKQRERILKEFSETEEKMVLLMSLKAGGVG 1164

Query: 693  LNLTAASNVFLMDP 734
            LNLTAASNVFLMDP
Sbjct: 1165 LNLTAASNVFLMDP 1178