BLASTX nr result

ID: Coptis24_contig00012669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012669
         (797 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282019.1| PREDICTED: uncharacterized protein LOC100266...   221   2e-55
ref|XP_002530346.1| conserved hypothetical protein [Ricinus comm...   219   4e-55
emb|CAN74693.1| hypothetical protein VITISV_006537 [Vitis vinifera]   208   1e-51
ref|NP_001235009.1| uncharacterized protein LOC100500228 [Glycin...   200   3e-49
ref|XP_002308462.1| predicted protein [Populus trichocarpa] gi|2...   200   3e-49

>ref|XP_002282019.1| PREDICTED: uncharacterized protein LOC100266598 [Vitis vinifera]
          Length = 190

 Score =  221 bits (562), Expect = 2e-55
 Identities = 122/193 (63%), Positives = 139/193 (72%)
 Frame = +3

Query: 114 AVTVTQLIQPTYGTSRVHLVPVPSIHCSYQKSCFPSSNHVIRFSDTFSRSHQNLAAVAKA 293
           A  V  +  PT   S VHL  +P  H       F + N       T   SH++L  V KA
Sbjct: 2   ATAVRLIFHPTRAASHVHL-SLP--HSLSHTLVFINGNKTRSSKLTEIASHRHLMPVPKA 58

Query: 294 SSKNESIVEAEEEDGVQLGTMKLPSNTDIPRFESLLFQWANSLCQGATLPLPMPLKVDKI 473
           S ++ SIV  EEE GV LGTMKLPS+TDIPRFESLLFQWANSLCQGA LPLP+PLKVD+I
Sbjct: 59  SPESGSIVPGEEE-GVSLGTMKLPSDTDIPRFESLLFQWANSLCQGANLPLPVPLKVDRI 117

Query: 474 TRGARVAFIIIGDATTEVLVYIDCLVFPATENSGPVFRAIRNGPSKEQSPPGEPRIMRSL 653
             GAR+ FI IGD  TEVLVYIDCLVFPAT+ SGP FRAIRNGP K+ SPPGEPRIMRSL
Sbjct: 118 QGGARLGFITIGDGKTEVLVYIDCLVFPATDGSGPTFRAIRNGPLKDLSPPGEPRIMRSL 177

Query: 654 QEALKKSVQIAQL 692
            +ALKKSV+IA++
Sbjct: 178 LQALKKSVEIARV 190


>ref|XP_002530346.1| conserved hypothetical protein [Ricinus communis]
           gi|223530150|gb|EEF32062.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 200

 Score =  219 bits (559), Expect = 4e-55
 Identities = 116/182 (63%), Positives = 140/182 (76%), Gaps = 3/182 (1%)
 Frame = +3

Query: 153 TSRVHLVP-VPSIHCSYQKSCFPSSNHVIRFSDTFSRSHQNLAAVAKASSKNESIVEAEE 329
           TS V + P +PS+        F ++N+   F+      HQNL AVAK+S +N+ IV A++
Sbjct: 23  TSHVRISPSLPSL-----SRPFLTTNNCFLFTVAEFHGHQNLLAVAKSSPQNDGIVTADD 77

Query: 330 --EDGVQLGTMKLPSNTDIPRFESLLFQWANSLCQGATLPLPMPLKVDKITRGARVAFII 503
             E+GV LGT+KLPS+TD+PRFE LLFQWANSLCQGA LPLP PLKVDKI  GAR+ FI 
Sbjct: 78  DSENGVSLGTLKLPSDTDLPRFEILLFQWANSLCQGANLPLPAPLKVDKIPGGARLGFIT 137

Query: 504 IGDATTEVLVYIDCLVFPATENSGPVFRAIRNGPSKEQSPPGEPRIMRSLQEALKKSVQI 683
           IGD  TEVLVYIDCLVFPAT +SGP+FRAIRNGP K+QSPPGEPRIMRSL +AL+KSV+I
Sbjct: 138 IGDGKTEVLVYIDCLVFPATGDSGPIFRAIRNGPLKDQSPPGEPRIMRSLLQALQKSVEI 197

Query: 684 AQ 689
            +
Sbjct: 198 TR 199


>emb|CAN74693.1| hypothetical protein VITISV_006537 [Vitis vinifera]
          Length = 138

 Score =  208 bits (530), Expect = 1e-51
 Identities = 106/137 (77%), Positives = 118/137 (86%)
 Frame = +3

Query: 282 VAKASSKNESIVEAEEEDGVQLGTMKLPSNTDIPRFESLLFQWANSLCQGATLPLPMPLK 461
           V KAS ++ SIV  EEE GV LGTMKLPS+TDIPRFESLLFQWANSLCQGA LPLP+PLK
Sbjct: 3   VPKASPESGSIVPGEEE-GVSLGTMKLPSDTDIPRFESLLFQWANSLCQGANLPLPVPLK 61

Query: 462 VDKITRGARVAFIIIGDATTEVLVYIDCLVFPATENSGPVFRAIRNGPSKEQSPPGEPRI 641
           VD+I  GAR+ FI IGD  TEVLVYIDCLVFPAT+ SGP FRAIRNGP K+ SPPGEPRI
Sbjct: 62  VDRIQGGARLGFITIGDGKTEVLVYIDCLVFPATDGSGPTFRAIRNGPLKDLSPPGEPRI 121

Query: 642 MRSLQEALKKSVQIAQL 692
           MRSL +ALKKSV+IA++
Sbjct: 122 MRSLLQALKKSVEIARV 138


>ref|NP_001235009.1| uncharacterized protein LOC100500228 [Glycine max]
           gi|255629764|gb|ACU15231.1| unknown [Glycine max]
          Length = 188

 Score =  200 bits (509), Expect = 3e-49
 Identities = 108/196 (55%), Positives = 134/196 (68%)
 Frame = +3

Query: 105 MVTAVTVTQLIQPTYGTSRVHLVPVPSIHCSYQKSCFPSSNHVIRFSDTFSRSHQNLAAV 284
           M ++ +  Q + P    +  H+   P        S  P  ++   FS   +  H   A +
Sbjct: 4   MASSSSTMQSVYPRVSGANFHVPLSPH-------SLVPVYSNSHSFSKLRNSIHLAAAPL 56

Query: 285 AKASSKNESIVEAEEEDGVQLGTMKLPSNTDIPRFESLLFQWANSLCQGATLPLPMPLKV 464
            KAS+ N  + +    DGV LGTMKLP +TD+ RF+SLLFQWANSLCQGA LPLP+PLKV
Sbjct: 57  PKASAGNGGLTD----DGVSLGTMKLPLDTDLQRFDSLLFQWANSLCQGANLPLPVPLKV 112

Query: 465 DKITRGARVAFIIIGDATTEVLVYIDCLVFPATENSGPVFRAIRNGPSKEQSPPGEPRIM 644
           DKI  GAR+ FI IGD  TEVLVYIDCLVFP TENS P+FRAIRNGP K+++PPGEPRIM
Sbjct: 113 DKIPGGARLGFITIGDGKTEVLVYIDCLVFPPTENSAPIFRAIRNGPLKDKAPPGEPRIM 172

Query: 645 RSLQEALKKSVQIAQL 692
           RSL +AL+KSV+IA+L
Sbjct: 173 RSLLQALQKSVEIARL 188


>ref|XP_002308462.1| predicted protein [Populus trichocarpa] gi|222854438|gb|EEE91985.1|
           predicted protein [Populus trichocarpa]
          Length = 139

 Score =  200 bits (508), Expect = 3e-49
 Identities = 99/137 (72%), Positives = 114/137 (83%), Gaps = 2/137 (1%)
 Frame = +3

Query: 282 VAKASSKNESIVEAEE--EDGVQLGTMKLPSNTDIPRFESLLFQWANSLCQGATLPLPMP 455
           V K++ +N+ IV A+   EDGV LGT+KLP NTD+ RFE+LLFQWANSLCQGA LPLPMP
Sbjct: 1   VPKSNPENDGIVAADNDGEDGVSLGTLKLPGNTDLQRFENLLFQWANSLCQGANLPLPMP 60

Query: 456 LKVDKITRGARVAFIIIGDATTEVLVYIDCLVFPATENSGPVFRAIRNGPSKEQSPPGEP 635
           LKVDKI  G R+ FI +GD  TEVLVYIDCLVFPAT +SGP+FRAIRNG  K+ SPPGEP
Sbjct: 61  LKVDKIPGGTRLGFITVGDGKTEVLVYIDCLVFPATSDSGPIFRAIRNGTLKDVSPPGEP 120

Query: 636 RIMRSLQEALKKSVQIA 686
           RIMRSL +AL+KSVQIA
Sbjct: 121 RIMRSLLQALQKSVQIA 137


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