BLASTX nr result

ID: Coptis24_contig00012668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012668
         (896 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264651.1| PREDICTED: zinc finger protein-like 1 [Vitis...   352   9e-95
ref|NP_001242749.1| uncharacterized protein LOC100775639 [Glycin...   324   1e-86
ref|XP_003592487.1| Zinc finger protein-like protein [Medicago t...   322   7e-86
ref|XP_002313174.1| predicted protein [Populus trichocarpa] gi|2...   320   2e-85
ref|XP_002300269.1| predicted protein [Populus trichocarpa] gi|2...   319   6e-85

>ref|XP_002264651.1| PREDICTED: zinc finger protein-like 1 [Vitis vinifera]
           gi|296083059|emb|CBI22463.3| unnamed protein product
           [Vitis vinifera]
          Length = 359

 Score =  352 bits (902), Expect = 9e-95
 Identities = 161/223 (72%), Positives = 187/223 (83%), Gaps = 8/223 (3%)
 Frame = -1

Query: 830 MVVCKCRKATKLYCFVHKLPVCGECICFPEHQICVVRTYSEWVIDGDYDWPPACCLCQAM 651
           MVVCKCRKATKLYCFVHK+PVCGECICFPEHQICVVRTYSEWVIDG+YDWPP CCLCQA 
Sbjct: 1   MVVCKCRKATKLYCFVHKVPVCGECICFPEHQICVVRTYSEWVIDGEYDWPPTCCLCQAA 60

Query: 650 LEDGSDSHTTRLGCLHVIHTSCLVSHIKSYPQNTAPAGFVCPACSTSIWPPKSIKDSGSS 471
           L++G+DS TTRLGCLH+IHT+CLVSHIKS+P +TAPAG+ CPACSTSIWPPKS++DSGS 
Sbjct: 61  LQEGTDSQTTRLGCLHIIHTNCLVSHIKSFPPHTAPAGYACPACSTSIWPPKSVRDSGSR 120

Query: 470 LHSKLKETIMQTGLEKNLFGSHPVSLPAAEYHG-PPAFASDPLVHLSANGGREKSSSDP- 297
           LHSKLKE IMQTG+EKNLFG+HPVSLPA E    PPAFASDPL+H+SA       + D  
Sbjct: 121 LHSKLKEAIMQTGMEKNLFGNHPVSLPAVESRSPPPAFASDPLMHVSATSSSPSIAKDET 180

Query: 296 ------STATGIGPREISVTDIVEIDGPNARGNQIMSDNGPNF 186
                 S+A G GP ++SV+DIVEIDGP++ GN  +S++  NF
Sbjct: 181 NFTDGYSSANGTGPSKLSVSDIVEIDGPSSAGNAQISNHETNF 223


>ref|NP_001242749.1| uncharacterized protein LOC100775639 [Glycine max]
           gi|255642399|gb|ACU21463.1| unknown [Glycine max]
          Length = 338

 Score =  324 bits (831), Expect = 1e-86
 Identities = 152/213 (71%), Positives = 176/213 (82%)
 Frame = -1

Query: 830 MVVCKCRKATKLYCFVHKLPVCGECICFPEHQICVVRTYSEWVIDGDYDWPPACCLCQAM 651
           MVVCKCRKATKLYCFVHK+PVCGECICFPEHQICVVRTYSEWVIDG+YDWPP CC CQ++
Sbjct: 1   MVVCKCRKATKLYCFVHKVPVCGECICFPEHQICVVRTYSEWVIDGEYDWPPKCCQCQSV 60

Query: 650 LEDGSDSHTTRLGCLHVIHTSCLVSHIKSYPQNTAPAGFVCPACSTSIWPPKSIKDSGSS 471
           LE+G  S TTRLGCLHVIHT+CLVSHIKS+P +TAPAG+VCP+CST+IWPPKS+KDSGS 
Sbjct: 61  LEEGDGSQTTRLGCLHVIHTNCLVSHIKSFPPHTAPAGYVCPSCSTTIWPPKSVKDSGSR 120

Query: 470 LHSKLKETIMQTGLEKNLFGSHPVSLPAAEYHGPPAFASDPLVHLSANGGREKSSSDPST 291
           LHSKLKE IMQ+G+EKN+FG+HPVS+  +    PPAFASDPL+ +  N G   S    S 
Sbjct: 121 LHSKLKEAIMQSGMEKNVFGNHPVSVTESR-SPPPAFASDPLI-IRENHGNSDSVDGYSP 178

Query: 290 ATGIGPREISVTDIVEIDGPNARGNQIMSDNGP 192
           ATG    ++SVTDIVEIDG N  GN  M ++ P
Sbjct: 179 ATGSELPKLSVTDIVEIDGANPAGN-FMKNSSP 210


>ref|XP_003592487.1| Zinc finger protein-like protein [Medicago truncatula]
           gi|355481535|gb|AES62738.1| Zinc finger protein-like
           protein [Medicago truncatula]
          Length = 339

 Score =  322 bits (825), Expect = 7e-86
 Identities = 154/221 (69%), Positives = 177/221 (80%), Gaps = 3/221 (1%)
 Frame = -1

Query: 830 MVVCKCRKATKLYCFVHKLPVCGECICFPEHQICVVRTYSEWVIDGDYDWPPACCLCQAM 651
           MVVCKCRKATKLYCFVHK+PVCGECICFPEHQICV+RTYSEWVIDG+YDWPP CC CQA+
Sbjct: 1   MVVCKCRKATKLYCFVHKVPVCGECICFPEHQICVIRTYSEWVIDGEYDWPPKCCQCQAI 60

Query: 650 LEDGSDSHTTRLGCLHVIHTSCLVSHIKSYPQNTAPAGFVCPACSTSIWPPKSIKDSGSS 471
           LE+G  S TTRLGCLHVIHT+CLVSHIKS+P +TAPAG+VCP+CSTSIWPPKS+KDSGS 
Sbjct: 61  LEEGGGSETTRLGCLHVIHTNCLVSHIKSFPPHTAPAGYVCPSCSTSIWPPKSVKDSGSR 120

Query: 470 LHSKLKETIMQTGLEKNLFGSHPVSLPAAEYHG-PPAFASDPLVHLSANGGREKSSSDPS 294
           LHSKLKE I+QTG+EKN+FG+HPVSL   E    PPAF+SDPL+       RE      S
Sbjct: 121 LHSKLKEAILQTGMEKNIFGNHPVSLSVTESRSPPPAFSSDPLI------SRENLGKSVS 174

Query: 293 TATGIGPREISVTDIVEIDGPNARGNQIMSDN--GPNFSYR 177
            A G    ++SVTDIVEIDG N+ GN + S +  GP  + R
Sbjct: 175 -ADGSELSKLSVTDIVEIDGANSGGNFMKSSSPVGPGATTR 214


>ref|XP_002313174.1| predicted protein [Populus trichocarpa] gi|222849582|gb|EEE87129.1|
           predicted protein [Populus trichocarpa]
          Length = 330

 Score =  320 bits (821), Expect = 2e-85
 Identities = 148/211 (70%), Positives = 173/211 (81%)
 Frame = -1

Query: 830 MVVCKCRKATKLYCFVHKLPVCGECICFPEHQICVVRTYSEWVIDGDYDWPPACCLCQAM 651
           MVVCKCRKATKLYCFVHK+PVCG+CICFPEHQICVVRTYSEWVIDG+YDWPP CC CQA+
Sbjct: 1   MVVCKCRKATKLYCFVHKVPVCGDCICFPEHQICVVRTYSEWVIDGEYDWPPKCCSCQAV 60

Query: 650 LEDGSDSHTTRLGCLHVIHTSCLVSHIKSYPQNTAPAGFVCPACSTSIWPPKSIKDSGSS 471
           L++G    TTRLGCLH IHT+CLVSHIKS+P +TAPAG+VCP+CST IWPPKS+KDSGS 
Sbjct: 61  LQEGDGPQTTRLGCLHAIHTNCLVSHIKSFPPHTAPAGYVCPSCSTPIWPPKSVKDSGSR 120

Query: 470 LHSKLKETIMQTGLEKNLFGSHPVSLPAAEYHGPPAFASDPLVHLSANGGREKSSSDPST 291
           LHSKLKE IMQTGLEKNLFG+HP+SLPA     PPAF SDPLV +S       SS   ++
Sbjct: 121 LHSKLKEAIMQTGLEKNLFGNHPISLPAP----PPAFTSDPLVAIS-------SSPSVTS 169

Query: 290 ATGIGPREISVTDIVEIDGPNARGNQIMSDN 198
            TG GP +ISV+DI EI+ P++  N + + +
Sbjct: 170 ETGTGPSKISVSDIKEIESPSSVVNYMKNSS 200


>ref|XP_002300269.1| predicted protein [Populus trichocarpa] gi|222847527|gb|EEE85074.1|
           predicted protein [Populus trichocarpa]
          Length = 325

 Score =  319 bits (817), Expect = 6e-85
 Identities = 151/211 (71%), Positives = 170/211 (80%)
 Frame = -1

Query: 830 MVVCKCRKATKLYCFVHKLPVCGECICFPEHQICVVRTYSEWVIDGDYDWPPACCLCQAM 651
           MVVCKCRKATKLYCFVHK+PVCGECICFPEHQICVVRTYSEWVIDG+YDWPP C  CQA+
Sbjct: 1   MVVCKCRKATKLYCFVHKVPVCGECICFPEHQICVVRTYSEWVIDGEYDWPPKCYSCQAV 60

Query: 650 LEDGSDSHTTRLGCLHVIHTSCLVSHIKSYPQNTAPAGFVCPACSTSIWPPKSIKDSGSS 471
           LE+G    TTRLGCLHVIHT+CLVSHIKS+P +TAPAG+VCP+CST IWPPKS+KDSGS 
Sbjct: 61  LEEGDGPQTTRLGCLHVIHTNCLVSHIKSFPPHTAPAGYVCPSCSTPIWPPKSVKDSGSR 120

Query: 470 LHSKLKETIMQTGLEKNLFGSHPVSLPAAEYHGPPAFASDPLVHLSANGGREKSSSDPST 291
            HSKLKE IMQTGLEKNLFG+HPVSL A     PP F SDPLV +S+      S S    
Sbjct: 121 FHSKLKEAIMQTGLEKNLFGNHPVSLLAP----PPTFTSDPLVAISS------SFSVTKD 170

Query: 290 ATGIGPREISVTDIVEIDGPNARGNQIMSDN 198
            TG G  +ISV+DIVEID PN+ GN + + +
Sbjct: 171 ETGTGSSKISVSDIVEIDSPNSAGNYMKNSS 201


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