BLASTX nr result

ID: Coptis24_contig00012665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012665
         (1946 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283220.2| PREDICTED: uncharacterized protein LOC100260...   620   e-175
ref|XP_002534293.1| nucleic acid binding protein, putative [Rici...   620   e-175
ref|XP_002285189.1| PREDICTED: uncharacterized protein LOC100262...   595   e-167
ref|XP_002318320.1| predicted protein [Populus trichocarpa] gi|2...   588   e-165
ref|XP_003534121.1| PREDICTED: uncharacterized protein LOC100800...   583   e-164

>ref|XP_002283220.2| PREDICTED: uncharacterized protein LOC100260988 [Vitis vinifera]
          Length = 455

 Score =  620 bits (1600), Expect = e-175
 Identities = 318/436 (72%), Positives = 355/436 (81%), Gaps = 9/436 (2%)
 Frame = -1

Query: 1580 LENGSNNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHK 1401
            LENGSN+KRKRRPAGTPDPDAEVVSLSPKTLLESDRY+CEICNQGFQRDQNLQMHRRRHK
Sbjct: 21   LENGSNSKRKRRPAGTPDPDAEVVSLSPKTLLESDRYICEICNQGFQRDQNLQMHRRRHK 80

Query: 1400 VPWKLLKRETPEVKKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCS 1221
            VPWKLLKRETP V+KRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKC+
Sbjct: 81   VPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCN 140

Query: 1220 KGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACNAGRIRSDMQTIMQPACL 1041
            KGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACN G +R + Q +   ACL
Sbjct: 141  KGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACNMGHLRPESQLLQPAACL 200

Query: 1040 SRTAXXXXXXSDTNFSTAPWPGMRGAKPTMDNVFL-----HNQNNPSTADHHHNLELQLL 876
            SRTA      S+TNFS  PW G+   +P +D++FL     +N NNP    H+HNLELQLL
Sbjct: 201  SRTASSPSPSSETNFSVPPWSGLMTPRP-VDSIFLTSDGDNNNNNPPKKAHYHNLELQLL 259

Query: 875  PSSKPLQNASASRNTDENHATQLQLSIGSSDHGEKNEVSKNKINNND--AVKSPPKNKNT 702
             +  PL  A AS   DENH+TQLQLSIGSSD  EKNE S   + N +  A    P+  NT
Sbjct: 260  TTPNPLV-ALASPKADENHSTQLQLSIGSSDFNEKNESSIINLINKEYSAPARCPRECNT 318

Query: 701  NEESMSIASRMKEQAQEQLKLAMAEKAYAEEARQQAKRQIELAEQEFTNAKRIRQQAQVE 522
            +E++   A+R+KE+A+EQL+LAM EK YAEEARQQAKRQIELA++EFT+AKRIRQQAQ E
Sbjct: 319  SEKATFGAARLKEEAREQLRLAMEEKVYAEEARQQAKRQIELADKEFTHAKRIRQQAQAE 378

Query: 521  LDKAQILKEHATKQINSTILQITCHACKQQFQAISSS--TPPDENSLVAASYMSSAITEG 348
            LDKAQ LKEHA KQINSTILQITCHACKQQF+  ++    PPDENSLV  SYMSSAITEG
Sbjct: 379  LDKAQALKEHARKQINSTILQITCHACKQQFRTRTAGNVAPPDENSLV-LSYMSSAITEG 437

Query: 347  EGENDNRNHHGKRMQT 300
            E   +N +H   R +T
Sbjct: 438  E-VVENNHHRSVRAKT 452


>ref|XP_002534293.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223525559|gb|EEF28090.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 442

 Score =  620 bits (1599), Expect = e-175
 Identities = 323/424 (76%), Positives = 350/424 (82%), Gaps = 6/424 (1%)
 Frame = -1

Query: 1583 CLENGSNN-KRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRR 1407
            CLENGSNN KRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRR
Sbjct: 18   CLENGSNNNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRR 77

Query: 1406 HKVPWKLLKRETPEVKKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEK 1227
            HKVPWKLLKRETP V+KRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEK
Sbjct: 78   HKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEK 137

Query: 1226 CSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACNAGRIRSDMQ---TIM 1056
            CSK YAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACN GR+R D Q   T+ 
Sbjct: 138  CSKAYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACNMGRLRPDRQSQSTLQ 197

Query: 1055 QPACLSRTAXXXXXXSDTNFSTAPWPGMRGAKPT-MDNVFLHNQNNPSTAD-HHHNLELQ 882
              ACLSRTA      +D NFSTAPWP +  A+PT  D +FL    +P+T D   +NL+LQ
Sbjct: 198  PAACLSRTASSPSPSTDNNFSTAPWPPLLIARPTSTDAIFL---VSPTTIDKKDYNLDLQ 254

Query: 881  LLPSSKPLQNASASRNTDENHATQLQLSIGSSDHGEKNEVSKNKINNNDAVKSPPKNKNT 702
            L  +S PL   S S   D+NH+TQLQLSIGSSD  EKNE S     N DA K  P+  N 
Sbjct: 255  LSSTSNPLV-LSISPKRDDNHSTQLQLSIGSSDLSEKNE-SHIASTNKDAGKLSPRESNN 312

Query: 701  NEESMSIASRMKEQAQEQLKLAMAEKAYAEEARQQAKRQIELAEQEFTNAKRIRQQAQVE 522
            +E+  S A R+KEQA+EQL+LAMAEKAYAEEARQ+AKRQIELAEQEF NAKRIRQQAQ E
Sbjct: 313  SEKPESAALRLKEQAREQLRLAMAEKAYAEEARQRAKRQIELAEQEFANAKRIRQQAQAE 372

Query: 521  LDKAQILKEHATKQINSTILQITCHACKQQFQAISSSTPPDENSLVAASYMSSAITEGEG 342
             DKAQ L+EHA KQINST+LQ+TCHACKQQFQ   + TPPDENSLV  S+MSSA+TEGE 
Sbjct: 373  FDKAQALREHAMKQINSTLLQVTCHACKQQFQ---TRTPPDENSLV-LSHMSSAVTEGEV 428

Query: 341  ENDN 330
            ENDN
Sbjct: 429  ENDN 432


>ref|XP_002285189.1| PREDICTED: uncharacterized protein LOC100262958 [Vitis vinifera]
            gi|147787378|emb|CAN60092.1| hypothetical protein
            VITISV_033421 [Vitis vinifera]
          Length = 425

 Score =  595 bits (1533), Expect = e-167
 Identities = 306/414 (73%), Positives = 337/414 (81%)
 Frame = -1

Query: 1580 LENGSNNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHK 1401
            LENG  NKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHK
Sbjct: 22   LENGVCNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHK 81

Query: 1400 VPWKLLKRETPEVKKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEKCS 1221
            VPWKLLKRET EVKKRVFVCPEPSCLHHDP HALGDLVGIKKHFRRKHSNHKQWVCEKCS
Sbjct: 82   VPWKLLKRETQEVKKRVFVCPEPSCLHHDPLHALGDLVGIKKHFRRKHSNHKQWVCEKCS 141

Query: 1220 KGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACNAGRIRSDMQTIMQPACL 1041
            KGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDAC   ++R ++QT +QPAC 
Sbjct: 142  KGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACAVRQVRPELQT-LQPACS 200

Query: 1040 SRTAXXXXXXSDTNFSTAPWPGMRGAKPTMDNVFLHNQNNPSTADHHHNLELQLLPSSKP 861
            SRTA      SD NFS    PG+   KP         +NNPS +D  HNLEL+LLPS   
Sbjct: 201  SRTASSTSPSSDNNFSRVQLPGLTLPKPAETVFLCLERNNPSPSDLQHNLELRLLPS--- 257

Query: 860  LQNASASRNTDENHATQLQLSIGSSDHGEKNEVSKNKINNNDAVKSPPKNKNTNEESMSI 681
              N  +SRN+DENHAT L+LSIGS + GE NE    +  + DA +S P+  NT E +++ 
Sbjct: 258  -PNTYSSRNSDENHATHLKLSIGSCNSGEMNE---PRCASGDASRSSPREMNTAEPALA- 312

Query: 680  ASRMKEQAQEQLKLAMAEKAYAEEARQQAKRQIELAEQEFTNAKRIRQQAQVELDKAQIL 501
            ASR+KE A EQLKLAMAEKA AEEAR++AKRQIELAE EF NA+RIRQQAQ EL+KAQIL
Sbjct: 313  ASRLKELASEQLKLAMAEKASAEEARREAKRQIELAELEFANARRIRQQAQAELEKAQIL 372

Query: 500  KEHATKQINSTILQITCHACKQQFQAISSSTPPDENSLVAASYMSSAITEGEGE 339
            KE A K+++STILQITCHACK QFQA ++  P DE SL A SYMSSA+TEGEGE
Sbjct: 373  KEQAIKKVSSTILQITCHACKHQFQATAAGAPSDETSL-AMSYMSSALTEGEGE 425


>ref|XP_002318320.1| predicted protein [Populus trichocarpa] gi|222858993|gb|EEE96540.1|
            predicted protein [Populus trichocarpa]
          Length = 456

 Score =  588 bits (1517), Expect = e-165
 Identities = 306/431 (70%), Positives = 337/431 (78%), Gaps = 13/431 (3%)
 Frame = -1

Query: 1583 CLENGSN-NKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRR 1407
            CLENG+N NKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRR
Sbjct: 20   CLENGNNINKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRR 79

Query: 1406 HKVPWKLLKRETPEVKKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEK 1227
            HKVPWKLLKRETP V+KRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEK
Sbjct: 80   HKVPWKLLKRETPVVRKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEK 139

Query: 1226 CSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACNAGRIRSDMQTIMQPA 1047
            CSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACN G +RS+ Q++   A
Sbjct: 140  CSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACNMGNLRSESQSLQPAA 199

Query: 1046 CLSRTAXXXXXXSDTNFSTAPW-----------PGMRGAKPTMDNVFLHNQNNPSTADHH 900
            CLSRTA      SDTNFSTAPW             M    PT  +  +   ++  +A H+
Sbjct: 200  CLSRTASSPSPSSDTNFSTAPWLPLIIPRTTPDHAMFFITPTTTSSVVDKSDSSKSAAHY 259

Query: 899  HNLELQLLPSSKPLQNASASRNTDENHATQLQLSIGSSDHGEKNEVSKNKINNNDAVKSP 720
            HNLELQL  +S      S S   ++NH+TQLQLSIGSSD  ++NE + +  + +    SP
Sbjct: 260  HNLELQLSTASGNPLEISVSPKREDNHSTQLQLSIGSSDVSDRNESNISYTDKDHGKSSP 319

Query: 719  PKNKNTNEESMSIASRMKEQA-QEQLKLAMAEKAYAEEARQQAKRQIELAEQEFTNAKRI 543
             +N N +      ASR+KEQ  +EQL +AMAEK +AEEARQQAKRQIELAEQEF NAKRI
Sbjct: 320  RENNNGSPRPELGASRLKEQVIREQLMMAMAEKIHAEEARQQAKRQIELAEQEFANAKRI 379

Query: 542  RQQAQVELDKAQILKEHATKQINSTILQITCHACKQQFQAISSSTPPDENSLVAASYMSS 363
            RQQAQ ELDKAQ LK+HA KQINSTILQITCHACKQ+F A    T  DENSLV  SYMSS
Sbjct: 380  RQQAQAELDKAQALKQHAIKQINSTILQITCHACKQKFHA---RTQADENSLV-MSYMSS 435

Query: 362  AITEGEGENDN 330
            A TE E E+ N
Sbjct: 436  ATTEDEVEHIN 446


>ref|XP_003534121.1| PREDICTED: uncharacterized protein LOC100800187 [Glycine max]
          Length = 474

 Score =  583 bits (1502), Expect = e-164
 Identities = 308/456 (67%), Positives = 342/456 (75%), Gaps = 32/456 (7%)
 Frame = -1

Query: 1583 CLENGS-NNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRR 1407
            C ENG+  NKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRR
Sbjct: 19   CTENGTATNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRR 78

Query: 1406 HKVPWKLLKRETPEVKKRVFVCPEPSCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCEK 1227
            HKVPWKLLKRETP V+KRVFVCPEP+CLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCE+
Sbjct: 79   HKVPWKLLKRETPVVRKRVFVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCER 138

Query: 1226 CSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACNAGRIRSDMQTIMQPA 1047
            CSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACN GR+R + Q +   A
Sbjct: 139  CSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACNMGRLRPESQPLQPSA 198

Query: 1046 CLSRTAXXXXXXSDTNFSTAPWP-GMRGAKPTMDNVFLHNQNNPSTADH----------- 903
            CLSRTA      S+TNFSTAPWP  M   KP+         NNP TA             
Sbjct: 199  CLSRTASSPSPSSETNFSTAPWPTRMIIPKPSEPPTIF--MNNPITAITTAETSSKSNNK 256

Query: 902  --HHNLELQLLPSSKPLQNASASRNTD-------------ENHATQLQLSIGSSDHGEKN 768
              H NL+LQL   +     ++ +   D             ENH+T LQLSIGSSD  EKN
Sbjct: 257  LLHPNLDLQLSTPTTTNNTSNVANRIDAAISPKRDHHHHHENHSTHLQLSIGSSDMSEKN 316

Query: 767  EVSKNKINNNDAVKSPPKNKNTNEESMSIASRMKEQAQEQLKLAMAEKAYAEEARQQAKR 588
            E ++N    +       +N N  + +     R++EQA+E L++AMAEKAYAEEAR+QAKR
Sbjct: 317  ESNRNSSEKSSNSNINDQNNNNKQSNNMALLRVQEQAREHLRIAMAEKAYAEEARKQAKR 376

Query: 587  QIELAEQEFTNAKRIRQQAQVELDKAQILKEHATKQINSTILQITCHACKQQFQAISSST 408
            QIELAEQEFTNAKRIRQQAQ ELDKA  LKEHA KQINST+LQITCH CKQQFQA +++T
Sbjct: 377  QIELAEQEFTNAKRIRQQAQAELDKAYSLKEHAMKQINSTMLQITCHGCKQQFQARNAAT 436

Query: 407  PPDENSLVAASYMSSAI-TEGEGENDNRNH---HGK 312
             PDENSLV  SY+SSAI TEG GE +N N+   HGK
Sbjct: 437  TPDENSLV-LSYVSSAITTEGGGEVENDNNAKDHGK 471


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