BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012642
         (2561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234645.1| ethylene-responsive elongation factor EF-Ts ...   425   e-116
ref|XP_002524565.1| elongation factor ts, putative [Ricinus comm...   410   e-112
ref|XP_002282316.1| PREDICTED: elongation factor Ts, mitochondri...   407   e-111
ref|NP_192850.2| putative translation elongation factor Ts [Arab...   407   e-111
ref|NP_001061749.1| Os08g0399600 [Oryza sativa Japonica Group] g...   405   e-110

>ref|NP_001234645.1| ethylene-responsive elongation factor EF-Ts precursor [Solanum
            lycopersicum] gi|5669636|gb|AAD46403.1|AF096247_1
            ethylene-responsive elongation factor EF-Ts precursor
            [Solanum lycopersicum]
          Length = 391

 Score =  425 bits (1092), Expect = e-116
 Identities = 234/373 (62%), Positives = 277/373 (74%)
 Frame = +3

Query: 87   KMSFRILFNHLGSSRQSLHGYTCLAPQIAKINQTGTLFNSSNELSLGRQLFLRSFSAQVS 266
            K    I++  L SS  S H Y+ L      I ++G  F+          + +R +SA++S
Sbjct: 8    KRPIAIIYKSLNSSICSGHDYSTLTRYGNSIAKSGGYFHQHGNGPRSCAVSIRRYSAEIS 67

Query: 267  SSDQLNLIKLLRERTSAPIKDVKSALVNCNWDIENAQTELRKRGIVLASKKSLRTATEGL 446
            SS+Q+NLIK LRERTSAPIK+VK+ALV  NWDIE AQ +LRKRGIVLASKKS RTA EGL
Sbjct: 68   SSEQMNLIKQLRERTSAPIKEVKAALVTSNWDIEAAQKDLRKRGIVLASKKSSRTAAEGL 127

Query: 447  LALAQNESKAALIELNCETDFVSRNEIFQYXXXXXXXXXXXXXXXPEQVSTAFSLGSDYL 626
            LALAQNE KAA+IELNCETDFV+RNEIFQY                +Q   AF +G  +L
Sbjct: 128  LALAQNERKAAVIELNCETDFVARNEIFQYLALSLAKLALLLEGS-QQSFAAFPIG--HL 184

Query: 627  EELKINLDHPKLSGETTVQGAITEVAAMVGENVKLRRXXXXXXXXXXXXXXXLHTSPQPG 806
            EELK+NLDHPKLSGE +VQ AITEVAAM+GENVKLRR               LHTSPQPG
Sbjct: 185  EELKLNLDHPKLSGEKSVQNAITEVAAMMGENVKLRRGFAMSAPSLGVISTYLHTSPQPG 244

Query: 807  LGRLAGIVTLESEDKKVPLDALLRVGSELAMHVVAAKPQFLSRELVSSEALERERDILKS 986
            +GR+AGI++LE EDK V  DAL RVGSELAMHVVAAKP FL++E VSS+AL  ER+ILKS
Sbjct: 245  VGRIAGILSLEVEDKNVSEDALQRVGSELAMHVVAAKPLFLTKEDVSSDALSNEREILKS 304

Query: 987  QAESTGKPQIAIEKMVEGRMRKYMEEVVLLEQKFIVNDAINVKKLIDDLSKEVGFPVKVG 1166
            QAES+GKPQIA+EKMVEGR+RKY EEVVL+EQKFIVND +NVK L+ +LSK+VG PVK+G
Sbjct: 305  QAESSGKPQIAVEKMVEGRLRKYFEEVVLMEQKFIVNDTMNVKTLLSNLSKDVGSPVKIG 364

Query: 1167 KFFRMEVGEGIRR 1205
             F RMEVGEG++R
Sbjct: 365  SFLRMEVGEGLQR 377


>ref|XP_002524565.1| elongation factor ts, putative [Ricinus communis]
            gi|313118247|sp|B9SEZ6.1|EFTS_RICCO RecName:
            Full=Elongation factor Ts, mitochondrial; Short=EF-Ts;
            Short=EF-TsMt; Flags: Precursor
            gi|223536118|gb|EEF37773.1| elongation factor ts,
            putative [Ricinus communis]
          Length = 379

 Score =  410 bits (1054), Expect = e-112
 Identities = 218/325 (67%), Positives = 258/325 (79%), Gaps = 1/325 (0%)
 Frame = +3

Query: 234  LFLRSFSAQV-SSSDQLNLIKLLRERTSAPIKDVKSALVNCNWDIENAQTELRKRGIVLA 410
            +F+R FSA   ++++Q++LIK LRERTSAPIKDVK++LV+CNWDIE AQ +LRKRG VLA
Sbjct: 41   MFVRLFSAHAPAAAEQMSLIKQLRERTSAPIKDVKASLVDCNWDIEAAQKDLRKRGKVLA 100

Query: 411  SKKSLRTATEGLLALAQNESKAALIELNCETDFVSRNEIFQYXXXXXXXXXXXXXXXPEQ 590
            SKKS R ATEGLLALAQNE KAALIELNCETDFV+RN+IFQ                 +Q
Sbjct: 101  SKKSGRAATEGLLALAQNEGKAALIELNCETDFVARNDIFQCLALSLAKQALLTENTAQQ 160

Query: 591  VSTAFSLGSDYLEELKINLDHPKLSGETTVQGAITEVAAMVGENVKLRRXXXXXXXXXXX 770
             S    +G + LE+L INL+HPK+SGETTVQ AITEVAAM+GENVKLRR           
Sbjct: 161  ASGIHPVGPECLEDLMINLEHPKISGETTVQNAITEVAAMMGENVKLRRGFVMSTSLPGV 220

Query: 771  XXXXLHTSPQPGLGRLAGIVTLESEDKKVPLDALLRVGSELAMHVVAAKPQFLSRELVSS 950
                LHTSPQPGLGR+AG+++LE ED    LD L  VGSELAMHVVAAKP FL++ELVSS
Sbjct: 221  LSTYLHTSPQPGLGRIAGLLSLEIEDGNSQLDVLHHVGSELAMHVVAAKPLFLTKELVSS 280

Query: 951  EALERERDILKSQAESTGKPQIAIEKMVEGRMRKYMEEVVLLEQKFIVNDAINVKKLIDD 1130
            +ALE ER+ILKSQAESTGK Q+AIEKMVEGR+RKY EEVVL+EQKFI+NDA+NVK ++++
Sbjct: 281  DALESEREILKSQAESTGKSQMAIEKMVEGRLRKYYEEVVLMEQKFIINDAVNVKTVLNN 340

Query: 1131 LSKEVGFPVKVGKFFRMEVGEGIRR 1205
            LSKEVG PVK+G FFRMEVGEGI+R
Sbjct: 341  LSKEVGSPVKIGSFFRMEVGEGIQR 365


>ref|XP_002282316.1| PREDICTED: elongation factor Ts, mitochondrial [Vitis vinifera]
            gi|297738982|emb|CBI28227.3| unnamed protein product
            [Vitis vinifera]
          Length = 378

 Score =  407 bits (1046), Expect = e-111
 Identities = 212/324 (65%), Positives = 258/324 (79%)
 Frame = +3

Query: 234  LFLRSFSAQVSSSDQLNLIKLLRERTSAPIKDVKSALVNCNWDIENAQTELRKRGIVLAS 413
            +F R FSA+  +S+ +NLIK LRERTS+PIKDVK+AL++CNWDIE AQ ELRKRG VLAS
Sbjct: 42   IFPRRFSAEAPASEHMNLIKQLRERTSSPIKDVKAALIDCNWDIEAAQKELRKRGKVLAS 101

Query: 414  KKSLRTATEGLLALAQNESKAALIELNCETDFVSRNEIFQYXXXXXXXXXXXXXXXPEQV 593
            K S RTA +GLLALAQNE++AA+IELNCETDFV+RN+IFQY               P   
Sbjct: 102  KMSARTAAQGLLALAQNETRAAVIELNCETDFVARNDIFQYLASSLAKLALSVENPPLSA 161

Query: 594  STAFSLGSDYLEELKINLDHPKLSGETTVQGAITEVAAMVGENVKLRRXXXXXXXXXXXX 773
            +    +G +YLE+LK+N DHPK SGETTVQ AITEVAAM+GENV+LRR            
Sbjct: 162  AGVSPVGPEYLEDLKMNFDHPKFSGETTVQNAITEVAAMMGENVRLRR-GFLMSTPNGIV 220

Query: 774  XXXLHTSPQPGLGRLAGIVTLESEDKKVPLDALLRVGSELAMHVVAAKPQFLSRELVSSE 953
               LHT P+PGLGR+AG+++LE+ED+    DAL RVGSELAMHVVAAKP FL+RELVSSE
Sbjct: 221  STYLHTCPRPGLGRIAGVLSLEAEDQLSLSDALQRVGSELAMHVVAAKPLFLTRELVSSE 280

Query: 954  ALERERDILKSQAESTGKPQIAIEKMVEGRMRKYMEEVVLLEQKFIVNDAINVKKLIDDL 1133
            A+E ER+IL+SQAESTGK Q+AIEKMVEGR++KY+EEVVL+EQKF+VND+INVK ++++L
Sbjct: 281  AMESEREILRSQAESTGKSQLAIEKMVEGRLKKYVEEVVLMEQKFVVNDSINVKTVLNNL 340

Query: 1134 SKEVGFPVKVGKFFRMEVGEGIRR 1205
            SKEVG  VK+G FFRMEVGEGI+R
Sbjct: 341  SKEVGSSVKIGSFFRMEVGEGIQR 364


>ref|NP_192850.2| putative translation elongation factor Ts [Arabidopsis thaliana]
            gi|75287865|sp|Q5XF75.1|EFTS_ARATH RecName:
            Full=Elongation factor Ts, mitochondrial; Short=EF-Ts;
            Short=EF-TsMt; Flags: Precursor
            gi|52627103|gb|AAU84678.1| At4g11120 [Arabidopsis
            thaliana] gi|55167888|gb|AAV43776.1| At4g11120
            [Arabidopsis thaliana] gi|332657575|gb|AEE82975.1|
            putative translation elongation factor Ts [Arabidopsis
            thaliana]
          Length = 395

 Score =  407 bits (1046), Expect = e-111
 Identities = 221/371 (59%), Positives = 270/371 (72%), Gaps = 3/371 (0%)
 Frame = +3

Query: 102  ILFNHLGSSRQSLHGYTCLAPQIAKINQTGTLFNSS-NELSLGRQLFLRSFSAQV--SSS 272
            + +  + S   S + Y+ +A +   ++Q  +   S    L  G   F+RSFS++   + S
Sbjct: 13   VFYYSVSSRFSSGNEYSTVASKFETLSQYKSSVPSGYTSLVRGFGNFIRSFSSEAPPAVS 72

Query: 273  DQLNLIKLLRERTSAPIKDVKSALVNCNWDIENAQTELRKRGIVLASKKSLRTATEGLLA 452
            DQ++LIK LRERTSAPIKDVK++LV CNWD+E AQ +LRKRG VLASKKS RTA EG+LA
Sbjct: 73   DQMSLIKQLRERTSAPIKDVKASLVECNWDLEAAQKDLRKRGKVLASKKSSRTAAEGMLA 132

Query: 453  LAQNESKAALIELNCETDFVSRNEIFQYXXXXXXXXXXXXXXXPEQVSTAFSLGSDYLEE 632
            +AQNE K A+IELNCETDFV+RNEIFQY                +QVS  F  G +  EE
Sbjct: 133  VAQNEGKVAVIELNCETDFVARNEIFQYLALAMAKHALLVESSSQQVSGVFPFGPELFEE 192

Query: 633  LKINLDHPKLSGETTVQGAITEVAAMVGENVKLRRXXXXXXXXXXXXXXXLHTSPQPGLG 812
             K+NLDHPK++GETTV  A+TEVAA++GENVK RR               LHTSPQPGLG
Sbjct: 193  FKLNLDHPKVNGETTVSNAVTEVAAIMGENVKFRRGFLMSKSSAGVLSAYLHTSPQPGLG 252

Query: 813  RLAGIVTLESEDKKVPLDALLRVGSELAMHVVAAKPQFLSRELVSSEALERERDILKSQA 992
            R+AGIV+LE E +   L+A+ RVGSELAMHVVAAKP FLS++LVSSEA+  ER+ILKSQA
Sbjct: 253  RIAGIVSLEVEGENTQLEAIQRVGSELAMHVVAAKPLFLSKDLVSSEAMANEREILKSQA 312

Query: 993  ESTGKPQIAIEKMVEGRMRKYMEEVVLLEQKFIVNDAINVKKLIDDLSKEVGFPVKVGKF 1172
            ESTGK Q+AIEK+VEGR+RKY EEV L+EQKFIVNDAIN+K L+D+LSKEVG PVKV  F
Sbjct: 313  ESTGKNQMAIEKIVEGRLRKYFEEVALMEQKFIVNDAINIKTLVDNLSKEVGSPVKVTDF 372

Query: 1173 FRMEVGEGIRR 1205
             R+EVGEGI R
Sbjct: 373  LRVEVGEGIER 383


>ref|NP_001061749.1| Os08g0399600 [Oryza sativa Japonica Group]
            gi|75294316|sp|Q6ZJS7.1|EFTS_ORYSJ RecName:
            Full=Elongation factor Ts, mitochondrial; Short=EF-Ts;
            Short=EF-TsMt; Flags: Precursor
            gi|37805964|dbj|BAC99379.1| putative ethylene-responsive
            elongation factor EF-Ts precursor [Oryza sativa Japonica
            Group] gi|113623718|dbj|BAF23663.1| Os08g0399600 [Oryza
            sativa Japonica Group] gi|215701316|dbj|BAG92740.1|
            unnamed protein product [Oryza sativa Japonica Group]
          Length = 366

 Score =  405 bits (1040), Expect = e-110
 Identities = 205/323 (63%), Positives = 252/323 (78%)
 Frame = +3

Query: 240  LRSFSAQVSSSDQLNLIKLLRERTSAPIKDVKSALVNCNWDIENAQTELRKRGIVLASKK 419
            LR FS++V +S+Q+NLIK LRERTSAPIKDVK++LV+CNWDI+ AQ +LRKRG+VLA+KK
Sbjct: 47   LRRFSSEVPASEQMNLIKQLRERTSAPIKDVKASLVSCNWDIDVAQKDLRKRGVVLAAKK 106

Query: 420  SLRTATEGLLALAQNESKAALIELNCETDFVSRNEIFQYXXXXXXXXXXXXXXXPEQVST 599
            S RTA EGLLA+AQ+E +AA++ELNCETDFV+RN++FQY                E V  
Sbjct: 107  SSRTAAEGLLAIAQDEKRAAVVELNCETDFVARNDVFQYLASSLAKLALSARDPGELV-- 164

Query: 600  AFSLGSDYLEELKINLDHPKLSGETTVQGAITEVAAMVGENVKLRRXXXXXXXXXXXXXX 779
             F  G DYLE L +NLDHPKLSGETTVQ A+TEVAAMVGENVK RR              
Sbjct: 165  -FPFGPDYLENLNVNLDHPKLSGETTVQSAVTEVAAMVGENVKFRRGFIMSTTAHGVVCS 223

Query: 780  XLHTSPQPGLGRLAGIVTLESEDKKVPLDALLRVGSELAMHVVAAKPQFLSRELVSSEAL 959
             +HT PQPGLGRLAG++TLE+ED   PLDAL RVG  +AMH+VA KP FLS+ELVS+ A+
Sbjct: 224  YMHTCPQPGLGRLAGLITLEAEDSNAPLDALQRVGKSIAMHIVATKPLFLSKELVSASAV 283

Query: 960  ERERDILKSQAESTGKPQIAIEKMVEGRMRKYMEEVVLLEQKFIVNDAINVKKLIDDLSK 1139
            E ERDIL++QAES+GK Q+A+EKMVEGR+RKY EEVVLLEQK++VND+ N+K +++DLSK
Sbjct: 284  ENERDILRTQAESSGKSQMAMEKMVEGRLRKYFEEVVLLEQKYVVNDSTNIKSVLNDLSK 343

Query: 1140 EVGFPVKVGKFFRMEVGEGIRRS 1208
            EVG  V VG F RMEVGEG+ ++
Sbjct: 344  EVGSKVTVGNFARMEVGEGVSKA 366