BLASTX nr result
ID: Coptis24_contig00012641
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00012641 (207 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002280444.1| PREDICTED: uncharacterized protein LOC100254... 94 1e-17 ref|XP_003630719.1| tRNA A64-2'-O-ribosylphosphate transferase [... 84 2e-14 ref|XP_003630718.1| tRNA A64-2'-O-ribosylphosphate transferase [... 84 2e-14 ref|XP_003630717.1| tRNA A64-2'-O-ribosylphosphate transferase [... 84 2e-14 ref|NP_001031519.1| initiator tRNA phosphoribosyl transferase-li... 82 6e-14 >ref|XP_002280444.1| PREDICTED: uncharacterized protein LOC100254132 [Vitis vinifera] gi|297738758|emb|CBI28003.3| unnamed protein product [Vitis vinifera] Length = 520 Score = 94.0 bits (232), Expect = 1e-17 Identities = 45/67 (67%), Positives = 53/67 (79%) Frame = -3 Query: 202 ESIIVNHDSANTLNASLDWDCSLHLPLWVSKIEMQSIEDRLEEWTRQLVASGADIASVAS 23 +S N + NT + S DWDCSLHLPLWVSK E +IEDRLEEWT++L ASGADIAS+A Sbjct: 147 DSSSYNRNGENTRHISHDWDCSLHLPLWVSKTEKAAIEDRLEEWTKELEASGADIASLAL 206 Query: 22 SLQKPLR 2 SL+KPLR Sbjct: 207 SLKKPLR 213 >ref|XP_003630719.1| tRNA A64-2'-O-ribosylphosphate transferase [Medicago truncatula] gi|355524741|gb|AET05195.1| tRNA A64-2'-O-ribosylphosphate transferase [Medicago truncatula] Length = 524 Score = 83.6 bits (205), Expect = 2e-14 Identities = 40/59 (67%), Positives = 46/59 (77%) Frame = -3 Query: 178 SANTLNASLDWDCSLHLPLWVSKIEMQSIEDRLEEWTRQLVASGADIASVASSLQKPLR 2 SA L+ DWDCSLHLPLWV E SIE+ LEEWT QL ASGADIAS+++SL+KPLR Sbjct: 149 SAPQLSEDSDWDCSLHLPLWVPLTEKASIEEHLEEWTEQLKASGADIASLSASLKKPLR 207 >ref|XP_003630718.1| tRNA A64-2'-O-ribosylphosphate transferase [Medicago truncatula] gi|355524740|gb|AET05194.1| tRNA A64-2'-O-ribosylphosphate transferase [Medicago truncatula] Length = 450 Score = 83.6 bits (205), Expect = 2e-14 Identities = 40/59 (67%), Positives = 46/59 (77%) Frame = -3 Query: 178 SANTLNASLDWDCSLHLPLWVSKIEMQSIEDRLEEWTRQLVASGADIASVASSLQKPLR 2 SA L+ DWDCSLHLPLWV E SIE+ LEEWT QL ASGADIAS+++SL+KPLR Sbjct: 149 SAPQLSEDSDWDCSLHLPLWVPLTEKASIEEHLEEWTEQLKASGADIASLSASLKKPLR 207 >ref|XP_003630717.1| tRNA A64-2'-O-ribosylphosphate transferase [Medicago truncatula] gi|355524739|gb|AET05193.1| tRNA A64-2'-O-ribosylphosphate transferase [Medicago truncatula] Length = 515 Score = 83.6 bits (205), Expect = 2e-14 Identities = 40/59 (67%), Positives = 46/59 (77%) Frame = -3 Query: 178 SANTLNASLDWDCSLHLPLWVSKIEMQSIEDRLEEWTRQLVASGADIASVASSLQKPLR 2 SA L+ DWDCSLHLPLWV E SIE+ LEEWT QL ASGADIAS+++SL+KPLR Sbjct: 149 SAPQLSEDSDWDCSLHLPLWVPLTEKASIEEHLEEWTEQLKASGADIASLSASLKKPLR 207 >ref|NP_001031519.1| initiator tRNA phosphoribosyl transferase-like protein [Arabidopsis thaliana] gi|330254756|gb|AEC09850.1| initiator tRNA phosphoribosyl transferase-like protein [Arabidopsis thaliana] Length = 462 Score = 81.6 bits (200), Expect = 6e-14 Identities = 40/65 (61%), Positives = 48/65 (73%), Gaps = 1/65 (1%) Frame = -3 Query: 193 IVNHDSANTLNASLD-WDCSLHLPLWVSKIEMQSIEDRLEEWTRQLVASGADIASVASSL 17 + + D + + LD WDCSLHLPLWVS E SIE RL+EWTR+L SGADIAS+AS L Sbjct: 152 LTSDDDGDNIRKLLDKWDCSLHLPLWVSNTERASIEARLDEWTRELDESGADIASLASCL 211 Query: 16 QKPLR 2 +KPLR Sbjct: 212 RKPLR 216