BLASTX nr result

ID: Coptis24_contig00012641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012641
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280444.1| PREDICTED: uncharacterized protein LOC100254...    94   1e-17
ref|XP_003630719.1| tRNA A64-2'-O-ribosylphosphate transferase [...    84   2e-14
ref|XP_003630718.1| tRNA A64-2'-O-ribosylphosphate transferase [...    84   2e-14
ref|XP_003630717.1| tRNA A64-2'-O-ribosylphosphate transferase [...    84   2e-14
ref|NP_001031519.1| initiator tRNA phosphoribosyl transferase-li...    82   6e-14

>ref|XP_002280444.1| PREDICTED: uncharacterized protein LOC100254132 [Vitis vinifera]
           gi|297738758|emb|CBI28003.3| unnamed protein product
           [Vitis vinifera]
          Length = 520

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 45/67 (67%), Positives = 53/67 (79%)
 Frame = -3

Query: 202 ESIIVNHDSANTLNASLDWDCSLHLPLWVSKIEMQSIEDRLEEWTRQLVASGADIASVAS 23
           +S   N +  NT + S DWDCSLHLPLWVSK E  +IEDRLEEWT++L ASGADIAS+A 
Sbjct: 147 DSSSYNRNGENTRHISHDWDCSLHLPLWVSKTEKAAIEDRLEEWTKELEASGADIASLAL 206

Query: 22  SLQKPLR 2
           SL+KPLR
Sbjct: 207 SLKKPLR 213


>ref|XP_003630719.1| tRNA A64-2'-O-ribosylphosphate transferase [Medicago truncatula]
           gi|355524741|gb|AET05195.1| tRNA
           A64-2'-O-ribosylphosphate transferase [Medicago
           truncatula]
          Length = 524

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 40/59 (67%), Positives = 46/59 (77%)
 Frame = -3

Query: 178 SANTLNASLDWDCSLHLPLWVSKIEMQSIEDRLEEWTRQLVASGADIASVASSLQKPLR 2
           SA  L+   DWDCSLHLPLWV   E  SIE+ LEEWT QL ASGADIAS+++SL+KPLR
Sbjct: 149 SAPQLSEDSDWDCSLHLPLWVPLTEKASIEEHLEEWTEQLKASGADIASLSASLKKPLR 207


>ref|XP_003630718.1| tRNA A64-2'-O-ribosylphosphate transferase [Medicago truncatula]
           gi|355524740|gb|AET05194.1| tRNA
           A64-2'-O-ribosylphosphate transferase [Medicago
           truncatula]
          Length = 450

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 40/59 (67%), Positives = 46/59 (77%)
 Frame = -3

Query: 178 SANTLNASLDWDCSLHLPLWVSKIEMQSIEDRLEEWTRQLVASGADIASVASSLQKPLR 2
           SA  L+   DWDCSLHLPLWV   E  SIE+ LEEWT QL ASGADIAS+++SL+KPLR
Sbjct: 149 SAPQLSEDSDWDCSLHLPLWVPLTEKASIEEHLEEWTEQLKASGADIASLSASLKKPLR 207


>ref|XP_003630717.1| tRNA A64-2'-O-ribosylphosphate transferase [Medicago truncatula]
           gi|355524739|gb|AET05193.1| tRNA
           A64-2'-O-ribosylphosphate transferase [Medicago
           truncatula]
          Length = 515

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 40/59 (67%), Positives = 46/59 (77%)
 Frame = -3

Query: 178 SANTLNASLDWDCSLHLPLWVSKIEMQSIEDRLEEWTRQLVASGADIASVASSLQKPLR 2
           SA  L+   DWDCSLHLPLWV   E  SIE+ LEEWT QL ASGADIAS+++SL+KPLR
Sbjct: 149 SAPQLSEDSDWDCSLHLPLWVPLTEKASIEEHLEEWTEQLKASGADIASLSASLKKPLR 207


>ref|NP_001031519.1| initiator tRNA phosphoribosyl transferase-like protein [Arabidopsis
           thaliana] gi|330254756|gb|AEC09850.1| initiator tRNA
           phosphoribosyl transferase-like protein [Arabidopsis
           thaliana]
          Length = 462

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 40/65 (61%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
 Frame = -3

Query: 193 IVNHDSANTLNASLD-WDCSLHLPLWVSKIEMQSIEDRLEEWTRQLVASGADIASVASSL 17
           + + D  + +   LD WDCSLHLPLWVS  E  SIE RL+EWTR+L  SGADIAS+AS L
Sbjct: 152 LTSDDDGDNIRKLLDKWDCSLHLPLWVSNTERASIEARLDEWTRELDESGADIASLASCL 211

Query: 16  QKPLR 2
           +KPLR
Sbjct: 212 RKPLR 216


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