BLASTX nr result

ID: Coptis24_contig00012627 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012627
         (1442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304294.1| predicted protein [Populus trichocarpa] gi|2...   280   9e-73
emb|CBI29503.3| unnamed protein product [Vitis vinifera]              274   5e-71
ref|XP_002531465.1| conserved hypothetical protein [Ricinus comm...   274   5e-71
ref|XP_002326661.1| predicted protein [Populus trichocarpa] gi|2...   273   8e-71
emb|CAN81597.1| hypothetical protein VITISV_039396 [Vitis vinifera]   243   7e-62

>ref|XP_002304294.1| predicted protein [Populus trichocarpa] gi|222841726|gb|EEE79273.1|
            predicted protein [Populus trichocarpa]
          Length = 580

 Score =  280 bits (715), Expect = 9e-73
 Identities = 186/453 (41%), Positives = 244/453 (53%), Gaps = 27/453 (5%)
 Frame = +2

Query: 164  ETNPSKFNSHFLYKALSVAIVLVILPLFPSQAPEFINQTMFTRTWELLHLLFVGVAVSYG 343
            + NP+K+ +HFLYKAL V + L+ILPLFPSQAPEFINQT+ TR WE LHL+FVG+AVSYG
Sbjct: 15   QANPTKYYTHFLYKALIVTVFLIILPLFPSQAPEFINQTLNTRGWEFLHLVFVGIAVSYG 74

Query: 344  LFSRRNVEETEKE-----NQLKVDTTQTYMSRILQVSSVFDDEVETPAFSDENKAQTWNS 508
            LFS+RN +ETEKE     NQ K D  Q+Y+SR LQVSSVFDD+V++   S E K QTW++
Sbjct: 75   LFSKRN-DETEKENNNSSNQSKFDNAQSYVSRFLQVSSVFDDDVDSSPKSGETKVQTWSN 133

Query: 509  KYFRGDPVVVVEDDNSVLD-EQSSTISNVSNKPLFLPVRSLRSAV--SDTDSA--ESFGE 673
            +Y+R DPVVVV + NSVLD EQ +T S +  KPL LPVRSL+S V  +D D    ES G 
Sbjct: 134  QYYRNDPVVVVAEQNSVLDKEQRATSSRIGEKPLLLPVRSLKSRVIAADVDETGKESTGR 193

Query: 674  PVEXXXXXXXXXXXXXXXXXXXXXXEFGDMYPIDLEENLKEN-VLPSPIPWRSRSGRMEM 850
                                     EFG    ++LEE LK N VLPSPIPWRSRSGRMEM
Sbjct: 194  SASISRSNSTGSKTFSSNSSKQKGGEFGGWDCLELEEKLKGNVVLPSPIPWRSRSGRMEM 253

Query: 851  KEEVGEVNPPPYSLPPSVEDTAFDQPEFRSFSSPYHR-------------XXXXXXXXXX 991
            +E   E + PPY+LPPS E+  ++    RSF+S   R                       
Sbjct: 254  RE---EADIPPYNLPPSSEEFEYN----RSFNSQVPRSARTGSATSSPKLSPSPSFSSPK 306

Query: 992  XXXXXXXXXXELRAKNSEDLVKKKKSAYKDXXXXXXXXXXXXXXXXXXXXXXXXXXXNGV 1171
                      E + K++ED V +KKS Y+                            + +
Sbjct: 307  KFSTSPSFSSEEQGKSAEDFV-RKKSIYRSPPPPPPPPPPPPPPSMNRKSSSMKPSFSAI 365

Query: 1172 SSE---KKDVTRSFTDELKDRSRSGREGFPGRRDCGIESMKSEGKYRIHSEASSMGRSVR 1342
              E   ++++ RSFT E KD +R G                            +M +SV+
Sbjct: 366  HDEAFLERELKRSFTTEPKDLNRGGN--------------------------LTMPKSVK 399

Query: 1343 TIRGNETITEPRKYRDFEEQRTDGKSEKRSKEV 1441
            T R N+ + E RK ++F++ R +  +EKR K+V
Sbjct: 400  TFRSNDLLGEARKEKEFDD-RINSNAEKRLKQV 431


>emb|CBI29503.3| unnamed protein product [Vitis vinifera]
          Length = 386

 Score =  274 bits (700), Expect = 5e-71
 Identities = 159/302 (52%), Positives = 189/302 (62%), Gaps = 1/302 (0%)
 Frame = +2

Query: 161  NETNPSKFNSHFLYKALSVAIVLVILPLFPSQAPEFINQTMFTRTWELLHLLFVGVAVSY 340
            N+ NPSKF S FLYKAL V + L ILPLFPSQAPEFINQT+F R+WELLHL+FVG+AVSY
Sbjct: 10   NQANPSKFYSGFLYKALIVTLFLAILPLFPSQAPEFINQTVFNRSWELLHLVFVGIAVSY 69

Query: 341  GLFSRRNVEETEKENQLKVDTTQTYMSRILQVSSVFDDEVETPAFSDENKAQTWNSKYFR 520
            GLFSRRN +ETEKEN  K D  Q+Y+SR LQVSSVFD+EVE+P+ S E+K QTWNS+Y+R
Sbjct: 70   GLFSRRN-DETEKENHSKFDNAQSYVSRFLQVSSVFDEEVESPSGSGESKVQTWNSQYYR 128

Query: 521  GDPVVVVEDDNSVLDEQSSTISNVSNKPLFLPVRSLRSAVSDTDSAESFGEPVEXXXXXX 700
            G PVVVV  ++SV+DEQSS  S +  KPL LPVRSL+S VSD  S               
Sbjct: 129  GKPVVVVTQESSVIDEQSSKGSRIGEKPLLLPVRSLKSRVSDPGSKR------------- 175

Query: 701  XXXXXXXXXXXXXXXXEFGDMYPIDLEENLKEN-VLPSPIPWRSRSGRMEMKEEVGEVNP 877
                            E GD+ P++LE+ L++N VLPSPIPWRSRSGRMEMKEEV     
Sbjct: 176  -----FSINRSTIKNGELGDLEPLELEKKLEQNVVLPSPIPWRSRSGRMEMKEEVDSPPL 230

Query: 878  PPYSLPPSVEDTAFDQPEFRSFSSPYHRXXXXXXXXXXXXXXXXXXXXELRAKNSEDLVK 1057
               S   SV  +        SFSSP                       E +AK+ ED  +
Sbjct: 231  SGSSHASSVSSSPKKLSPSPSFSSP------------KKPSLSPSLSSESQAKSVEDFAR 278

Query: 1058 KK 1063
            KK
Sbjct: 279  KK 280


>ref|XP_002531465.1| conserved hypothetical protein [Ricinus communis]
            gi|223528919|gb|EEF30915.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 565

 Score =  274 bits (700), Expect = 5e-71
 Identities = 188/467 (40%), Positives = 241/467 (51%), Gaps = 23/467 (4%)
 Frame = +2

Query: 98   MADSDAY--SHQLEVAPQRLVSGNETNPSKFNSHFLYKALSVAIVLVILPLFPSQAPEFI 271
            MAD+  Y   HQ     Q+  + N  NPSKF SHFLYKAL V I LVILPLFPSQAPEFI
Sbjct: 1    MADNTTYYTKHQ-----QQNQANNNNNPSKFYSHFLYKALIVTIFLVILPLFPSQAPEFI 55

Query: 272  NQTMFTRTWELLHLLFVGVAVSYGLFSRRNVEETEKEN--QLKVDTTQTYMSRILQVSSV 445
            NQT+ TR WE LHL+FVG+AVSYGLFSRRN +ETEK+N    K D  Q+Y+SR LQVSSV
Sbjct: 56   NQTLNTRGWEFLHLIFVGIAVSYGLFSRRN-DETEKDNSSNSKFDNAQSYVSRFLQVSSV 114

Query: 446  FDDEVETPAFSD---ENKAQTWNSKYFRGDPVVVV-EDDNSVLD-EQSSTISNVSNKPLF 610
            FDD+ ++P+ SD       QTWN++Y+R +PVVVV E+ +   D EQ ST S +  KPL 
Sbjct: 115  FDDDADSPSKSDVSNSTSVQTWNNQYYRNEPVVVVAEEQHPAFDQEQRSTGSRIGEKPLL 174

Query: 611  LPVRSLRSAVSDTDSAESFGE---PVEXXXXXXXXXXXXXXXXXXXXXXEFGDMYPIDLE 781
            LP+RSL+S V D D  E   E    V                       EFG +   DLE
Sbjct: 175  LPIRSLKSRVLDADGNEISKESISSVSASISRTNSNLGSKRFSSKSRNGEFGGLQHQDLE 234

Query: 782  ENLKEN-VLPSPIPWRSRSGRMEMKEEVGEVNPPP-YSLPPSVEDTAFDQ---------P 928
            E +K+N VLPSPIPWRSRSGRMEMKE   E + PP Y+LPPS+E++ F++         P
Sbjct: 235  EKIKDNVVLPSPIPWRSRSGRMEMKEAKEETDSPPLYTLPPSMEESEFNRFFRSQVSRSP 294

Query: 929  EFRSFSSPYHRXXXXXXXXXXXXXXXXXXXXELRAKNSEDLVKKKKSAYKDXXXXXXXXX 1108
               S +S                        E +AK++ED V++K               
Sbjct: 295  RSNSTASSPKLSPSPSMSSPKKLSPPPSFSAETQAKSAEDFVRRKSFHRSPPPPPPPPPP 354

Query: 1109 XXXXXXXXXXXXXXXXXXNGVSSEKKDVTRSFTDELKDRSRSGREGFPGRRDCGIESMKS 1288
                                  S  +D  RSFT E K+ +  G                 
Sbjct: 355  FPQLIRKSRSMKPGSSEIGNRDSVGRDFKRSFTSEPKEMNWVGN---------------- 398

Query: 1289 EGKYRIHSEASSMGRSVRTIRGNETITEPRKYRDFEEQRTDGKSEKR 1429
                      SSM +S+RT R N++     K ++F++   + K+EK+
Sbjct: 399  ----------SSMKKSIRTTRSNDSFAMASKEKEFDDV-INSKTEKK 434


>ref|XP_002326661.1| predicted protein [Populus trichocarpa] gi|222833983|gb|EEE72460.1|
            predicted protein [Populus trichocarpa]
          Length = 563

 Score =  273 bits (698), Expect = 8e-71
 Identities = 185/450 (41%), Positives = 238/450 (52%), Gaps = 24/450 (5%)
 Frame = +2

Query: 164  ETNPSKFNSHFLYKALSVAIVLVILPLFPSQAPEFINQTMFTRTWELLHLLFVGVAVSYG 343
            + NP+K+ ++FLYKAL V I L+IL LFPSQAPEF+NQT+ TR WE L L+FVG+AVSYG
Sbjct: 15   QANPTKYYTNFLYKALIVTIFLIILQLFPSQAPEFLNQTLNTRGWEFLRLVFVGIAVSYG 74

Query: 344  LFSRRNVEETEKE----NQLKVDTTQTYMSRILQVSSVFDDEVETPAFSDENKAQTWNSK 511
            LFSRRN +ETEKE    N  + D  Q+Y+SR LQVSSVFDDEV++P  S+E K QTW+++
Sbjct: 75   LFSRRN-DETEKEINNSNPSRFDNAQSYVSRFLQVSSVFDDEVDSPPESEETKVQTWSNQ 133

Query: 512  YFRGDPVVVVEDDNSVLD-EQSSTISNVSNKPLFLPVRSLRSAVSDTDSAESF-----GE 673
            Y+R DPVVVV + NS LD EQ +T S +  KPL LPVRSL+S V D D  E+      G 
Sbjct: 134  YYRNDPVVVVAEQNSALDKEQRATSSRIGEKPLLLPVRSLKSRVIDADVDETCKEYAGGS 193

Query: 674  PVEXXXXXXXXXXXXXXXXXXXXXXEFGDMYPIDLEENLKEN-VLPSPIPWRSRSGRMEM 850
                                     E G  Y  +LEE LKEN VLPSPIPWRSRSGRMEM
Sbjct: 194  ASISRSNSDSGSKRFSSNSSKNKSGESGGSYCQELEEKLKENFVLPSPIPWRSRSGRMEM 253

Query: 851  KEEVGEVNPPPYSLPPSVEDTAFDQPEFRSFSSPYHR-------------XXXXXXXXXX 991
            KE   E + P YSLPPS+E + ++    RSF+S   +                       
Sbjct: 254  KE---EADSPLYSLPPSLEKSEYN----RSFNSQVPQSARSISATSSPKLSPSPSFSSPK 306

Query: 992  XXXXXXXXXXELRAKNSEDLVKKKKSAYKDXXXXXXXXXXXXXXXXXXXXXXXXXXXNGV 1171
                      E+  K+ ED V +KKS Y+                            +  
Sbjct: 307  KFSPSPSFSSEVLGKSVEDFV-RKKSIYRSPPPPPPPPPPPPVNRESSSVKPISSAVHDE 365

Query: 1172 SSEKKDVTRSFTDELKDRSRSGREGFPGRRDCGIESMKSEGKYRIHSEASSMGRSVRTIR 1351
               ++++ RSFT E KD +R G    P                          +SVRTIR
Sbjct: 366  VLLERELKRSFTTEPKDLNRGGNLPMP--------------------------KSVRTIR 399

Query: 1352 GNETITEPRKYRDFEEQRTDGKSEKRSKEV 1441
             N+ + E R+ ++F++ R + K EKR KEV
Sbjct: 400  SNDLLGEARREKEFDD-RINSKEEKRLKEV 428


>emb|CAN81597.1| hypothetical protein VITISV_039396 [Vitis vinifera]
          Length = 909

 Score =  243 bits (621), Expect = 7e-62
 Identities = 173/480 (36%), Positives = 231/480 (48%), Gaps = 57/480 (11%)
 Frame = +2

Query: 173  PSKFNSHFLYKALSVAIVLVILPLFPSQAPEFINQTMFTRTWELLHLLFVGVAVSYGLFS 352
            PSK  +HFL K+L  A+ LV++PLFPSQAPE+IN T+ T+ WELLHLLF+G+AVSYG+FS
Sbjct: 16   PSKSCTHFLCKSLIFALFLVVIPLFPSQAPEYINHTLITKFWELLHLLFIGIAVSYGVFS 75

Query: 353  RRNVEETEKENQLKVDTTQTYMSRILQVSSVFDDEVETPAFSDENKA------------- 493
            RRNV+    E+   VD +++Y SR   VSS+F+D  E    S E                
Sbjct: 76   RRNVDRGI-ESHSTVDNSESYASRFXHVSSIFEDGFENSCGSGEKSVIQTWNSQHFQGES 134

Query: 494  --------------------------------------QTWNSKYFRGDPVVVVEDDNSV 559
                                                  QTW+S+YFRG+ +VVV   +  
Sbjct: 135  MVVVTSGSSVLDKRGXPRSSNFENGCENLFESDRKKVIQTWDSQYFRGETMVVVAKGSYA 194

Query: 560  LDEQSSTISNVSNKPLFLPVRSLRSAVSDTDSAESFGEPVEXXXXXXXXXXXXXXXXXXX 739
            LD+     S+V +KPL LPVR+L+S + DTDS ES    V                    
Sbjct: 195  LDQWGKPESSVDDKPLGLPVRNLKSRIKDTDSTES----VSGSRSKSSSKTGSSKSSGKV 250

Query: 740  XXXEFGDMYPIDLEENLKENV-LPSPIPWRSRSGRMEMKEEVGEVNPPPYSLPPSVEDTA 916
               +FG + P+ LEE LK+ V LPSPIPWRSRSGRMEM+EE    +   +S+PPS E+  
Sbjct: 251  RNGKFGKLGPLKLEEQLKDTVALPSPIPWRSRSGRMEMREEADSFHSHSHSMPPSFEEPE 310

Query: 917  FDQPEFRSF--SSPYHRXXXXXXXXXXXXXXXXXXXXELRAKNSEDLVKKKKSAYKDXXX 1090
            F+Q + RSF  S+PY                      EL     E+L   +KS Y     
Sbjct: 311  FEQLQSRSFRSSTPYSSQASSVSSSPRKLSPSSSASSELGNSKMEEL-GGRKSPYGSSTA 369

Query: 1091 XXXXXXXXXXXXXXXXXXXXXXXXNGVSSEKKDVTRSFTDELKDRSRSGREGFPGRRDCG 1270
                                    N  +SE  +  RSF DE K+ SRS RE     ++  
Sbjct: 370  TSPSPPGQMNGKAPLDMSRSHQFFNXSASE-MNAQRSFEDERKELSRSRREDQVNSKEWQ 428

Query: 1271 IESMKSEGKYRIHSEASSMGRSVRTIRGNETITEPRKYRDFEEQRTD---GKSEKRSKEV 1441
            + SMKS  K    ++  S GRSVRT R +E  +E RK  +    R D   GK+  +++EV
Sbjct: 429  LGSMKSAMKPGPPNKHLSRGRSVRTFRASELTSEARKVAEKGGNRMDDSVGKTYIKAEEV 488


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