BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00012611
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding prote...   116   2e-24
ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding prote...   116   2e-24
emb|CBI16387.3| unnamed protein product [Vitis vinifera]              103   2e-20
ref|XP_002513488.1| nuclear acid binding protein, putative [Rici...   101   5e-20
ref|XP_002313332.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19

>ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 2 [Vitis vinifera]
          Length = 438

 Score =  116 bits (291), Expect = 2e-24
 Identities = 54/72 (75%), Positives = 64/72 (88%)
 Frame = -1

Query: 434 AGYGQYPQQAEGMQEMVAMTGVVPSVEQKEELYDPLATPDVDKLNSAYLAVHGSAMVGRT 255
           AGY QYPQQAEG+Q++ AM G VP+VEQ++ELYDPLATPDVDKLN+AYLAVHGSA++GR+
Sbjct: 367 AGYLQYPQQAEGVQDLAAMAGAVPAVEQRDELYDPLATPDVDKLNAAYLAVHGSAILGRS 426

Query: 254 LWLKTSALYQQA 219
           LWLKTS   Q A
Sbjct: 427 LWLKTSPFSQMA 438


>ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           isoform 1 [Vitis vinifera]
          Length = 447

 Score =  116 bits (291), Expect = 2e-24
 Identities = 54/72 (75%), Positives = 64/72 (88%)
 Frame = -1

Query: 434 AGYGQYPQQAEGMQEMVAMTGVVPSVEQKEELYDPLATPDVDKLNSAYLAVHGSAMVGRT 255
           AGY QYPQQAEG+Q++ AM G VP+VEQ++ELYDPLATPDVDKLN+AYLAVHGSA++GR+
Sbjct: 376 AGYLQYPQQAEGVQDLAAMAGAVPAVEQRDELYDPLATPDVDKLNAAYLAVHGSAILGRS 435

Query: 254 LWLKTSALYQQA 219
           LWLKTS   Q A
Sbjct: 436 LWLKTSPFSQMA 447


>emb|CBI16387.3| unnamed protein product [Vitis vinifera]
          Length = 445

 Score =  103 bits (256), Expect = 2e-20
 Identities = 51/72 (70%), Positives = 59/72 (81%)
 Frame = -1

Query: 434 AGYGQYPQQAEGMQEMVAMTGVVPSVEQKEELYDPLATPDVDKLNSAYLAVHGSAMVGRT 255
           AGY QYPQQA     + AM G VP+VEQ++ELYDPLATPDVDKLN+AYLAVHGSA++GR+
Sbjct: 376 AGYLQYPQQAR--YYLAAMAGAVPAVEQRDELYDPLATPDVDKLNAAYLAVHGSAILGRS 433

Query: 254 LWLKTSALYQQA 219
           LWLKTS   Q A
Sbjct: 434 LWLKTSPFSQMA 445


>ref|XP_002513488.1| nuclear acid binding protein, putative [Ricinus communis]
           gi|223547396|gb|EEF48891.1| nuclear acid binding
           protein, putative [Ricinus communis]
          Length = 412

 Score =  101 bits (252), Expect = 5e-20
 Identities = 50/72 (69%), Positives = 60/72 (83%)
 Frame = -1

Query: 434 AGYGQYPQQAEGMQEMVAMTGVVPSVEQKEELYDPLATPDVDKLNSAYLAVHGSAMVGRT 255
           AGY QYPQQ +G+Q+M   TG +P VEQ+EELYDPLA PDVDKLN AYL+VHG+A++GR 
Sbjct: 345 AGYPQYPQQVDGVQDM---TGAIPVVEQREELYDPLAAPDVDKLNGAYLSVHGNAILGRP 401

Query: 254 LWLKTSALYQQA 219
           LW+KTS L QQA
Sbjct: 402 LWMKTS-LSQQA 412


>ref|XP_002313332.1| predicted protein [Populus trichocarpa] gi|222849740|gb|EEE87287.1|
           predicted protein [Populus trichocarpa]
          Length = 415

 Score =  100 bits (249), Expect = 1e-19
 Identities = 49/72 (68%), Positives = 56/72 (77%)
 Frame = -1

Query: 434 AGYGQYPQQAEGMQEMVAMTGVVPSVEQKEELYDPLATPDVDKLNSAYLAVHGSAMVGRT 255
           AGY QYPQQ EG  +M    GVVP  E +EE YDPLA PDVDKLN+AYL+ HGSA+ GRT
Sbjct: 346 AGYPQYPQQVEGAPDMA---GVVPVAEHREESYDPLAAPDVDKLNAAYLSTHGSAIFGRT 402

Query: 254 LWLKTSALYQQA 219
           LW+KTS+L QQA
Sbjct: 403 LWMKTSSLTQQA 414